PY17X_1319800 | DER1-like protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0020011      

  • Curated_GO_Components:  apicoplast      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:  ubiquitin-dependent ERAD pathway      

_IDPredictionOTHERSPmTPCS_Position
PY17X_1319800SP0.0482120.9516220.000166CS pos: 18-19. IIG-IK. Pr: 0.4813
No Results

  • Fasta :-

    >PY17X_1319800 MKMCIFFYVLLFFIYIIGIKDVRVECRKEYHIKKIPNGFTNKLIYNEIRGKNSNSINSVI YKRNILFHIRIPKKTLQGRNLFSNDIRNKKINEFLQKKKNSCYLHINSNVNEIKKKRDKI LKNVFLNAKLLQEYFNNFKSSLLYKYKNTKIITKLFLSTSFLVMILNVFGLRPEDIALHD KRIIRAFEFYRIITSALFYGDISLYVLTNIYMLYLQSQELEKSVGSSETLAFYLSQITIL SAICSYIKKPFYSTALLKSLLFTNCMLNPYNKSNLIFGINIYNMYLPYLSIVIDILHAQD FKASLSGILGIISGSIYYLSNIYLLEKCNKKFFKIPQILRNYLDSFNTDEFVF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1319800.fa Sequence name : PY17X_1319800 Sequence length : 353 VALUES OF COMPUTED PARAMETERS Coef20 : 4.437 CoefTot : -0.546 ChDiff : 27 ZoneTo : 20 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.559 2.759 0.580 1.002 MesoH : 0.325 0.792 -0.144 0.391 MuHd_075 : 11.080 8.112 5.255 1.803 MuHd_095 : 11.392 8.158 3.104 1.887 MuHd_100 : 6.999 7.705 2.682 1.534 MuHd_105 : 14.308 11.952 4.857 2.768 Hmax_075 : 23.450 23.600 6.223 7.887 Hmax_095 : 22.100 20.913 5.481 8.800 Hmax_100 : 23.500 23.100 4.746 8.140 Hmax_105 : 23.800 24.500 5.756 8.140 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9256 0.0744 DFMC : 0.9597 0.0403
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 353 PY17X_1319800 MKMCIFFYVLLFFIYIIGIKDVRVECRKEYHIKKIPNGFTNKLIYNEIRGKNSNSINSVIYKRNILFHIRIPKKTLQGRN 80 LFSNDIRNKKINEFLQKKKNSCYLHINSNVNEIKKKRDKILKNVFLNAKLLQEYFNNFKSSLLYKYKNTKIITKLFLSTS 160 FLVMILNVFGLRPEDIALHDKRIIRAFEFYRIITSALFYGDISLYVLTNIYMLYLQSQELEKSVGSSETLAFYLSQITIL 240 SAICSYIKKPFYSTALLKSLLFTNCMLNPYNKSNLIFGINIYNMYLPYLSIVIDILHAQDFKASLSGILGIISGSIYYLS 320 NIYLLEKCNKKFFKIPQILRNYLDSFNTDEFVF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1319800 2 -----MK|MC 0.060 . PY17X_1319800 20 IYIIGIK|DV 0.070 . PY17X_1319800 23 IGIKDVR|VE 0.077 . PY17X_1319800 27 DVRVECR|KE 0.090 . PY17X_1319800 28 VRVECRK|EY 0.086 . PY17X_1319800 33 RKEYHIK|KI 0.084 . PY17X_1319800 34 KEYHIKK|IP 0.087 . PY17X_1319800 42 PNGFTNK|LI 0.068 . PY17X_1319800 49 LIYNEIR|GK 0.083 . PY17X_1319800 51 YNEIRGK|NS 0.062 . PY17X_1319800 62 INSVIYK|RN 0.063 . PY17X_1319800 63 NSVIYKR|NI 0.149 . PY17X_1319800 70 NILFHIR|IP 0.077 . PY17X_1319800 73 FHIRIPK|KT 0.146 . PY17X_1319800 74 HIRIPKK|TL 0.089 . PY17X_1319800 79 KKTLQGR|NL 0.082 . PY17X_1319800 87 LFSNDIR|NK 0.098 . PY17X_1319800 89 SNDIRNK|KI 0.066 . PY17X_1319800 90 NDIRNKK|IN 0.221 . PY17X_1319800 97 INEFLQK|KK 0.063 . PY17X_1319800 98 NEFLQKK|KN 0.098 . PY17X_1319800 99 EFLQKKK|NS 0.079 . PY17X_1319800 114 SNVNEIK|KK 0.067 . PY17X_1319800 115 NVNEIKK|KR 0.108 . PY17X_1319800 116 VNEIKKK|RD 0.088 . PY17X_1319800 117 NEIKKKR|DK 0.219 . PY17X_1319800 119 IKKKRDK|IL 0.067 . PY17X_1319800 122 KRDKILK|NV 0.074 . PY17X_1319800 129 NVFLNAK|LL 0.062 . PY17X_1319800 139 EYFNNFK|SS 0.058 . PY17X_1319800 145 KSSLLYK|YK 0.092 . PY17X_1319800 147 SLLYKYK|NT 0.072 . PY17X_1319800 150 YKYKNTK|II 0.071 . PY17X_1319800 154 NTKIITK|LF 0.053 . PY17X_1319800 172 LNVFGLR|PE 0.088 . PY17X_1319800 181 DIALHDK|RI 0.066 . PY17X_1319800 182 IALHDKR|II 0.227 . PY17X_1319800 185 HDKRIIR|AF 0.259 . PY17X_1319800 191 RAFEFYR|II 0.106 . PY17X_1319800 222 QSQELEK|SV 0.148 . PY17X_1319800 248 AICSYIK|KP 0.055 . PY17X_1319800 249 ICSYIKK|PF 0.088 . PY17X_1319800 258 YSTALLK|SL 0.069 . PY17X_1319800 272 MLNPYNK|SN 0.079 . PY17X_1319800 302 LHAQDFK|AS 0.064 . PY17X_1319800 327 NIYLLEK|CN 0.058 . PY17X_1319800 330 LLEKCNK|KF 0.068 . PY17X_1319800 331 LEKCNKK|FF 0.088 . PY17X_1319800 334 CNKKFFK|IP 0.071 . PY17X_1319800 340 KIPQILR|NY 0.083 . ____________________________^_________________

  • Fasta :-

    >PY17X_1319800 ATGAAAATGTGTATTTTTTTTTACGTGTTATTATTTTTTATATACATAATTGGAATAAAA GATGTTCGCGTTGAATGCCGAAAAGAATATCATATAAAAAAAATACCCAATGGATTTACG AATAAGTTAATATATAATGAAATTAGGGGAAAAAATTCAAACAGTATAAACAGTGTAATA TATAAAAGAAATATTCTTTTCCATATAAGAATCCCAAAAAAAACACTTCAAGGACGCAAT TTATTTAGCAATGATATACGAAATAAAAAAATCAATGAATTTTTGCAAAAAAAAAAAAAT TCATGTTATCTACACATAAATAGTAATGTTAATGAAATTAAAAAAAAAAGAGATAAAATC CTAAAAAATGTATTTTTAAATGCTAAACTATTACAAGAATATTTTAATAATTTTAAATCA TCATTACTTTATAAATATAAAAATACAAAAATTATAACAAAATTGTTTTTATCAACATCT TTTCTAGTTATGATACTTAATGTATTTGGTTTAAGACCTGAAGATATTGCATTACACGAT AAGAGAATTATAAGAGCTTTTGAGTTTTATAGAATTATAACTTCTGCTTTGTTTTATGGT GACATTTCATTATATGTATTAACAAATATTTATATGCTTTATTTACAAAGCCAAGAGCTA GAAAAATCAGTAGGATCATCAGAAACACTTGCTTTTTATTTATCACAAATTACAATATTA TCTGCTATATGTTCGTATATAAAAAAGCCATTTTATTCAACAGCGTTGTTGAAATCTTTA TTATTCACAAACTGTATGCTAAACCCATATAACAAATCGAACTTAATATTTGGTATAAAT ATATACAATATGTATTTGCCTTATTTATCAATTGTTATTGATATTTTACATGCTCAAGAT TTTAAAGCTTCCTTATCTGGAATATTGGGTATAATAAGTGGATCTATTTATTATCTTTCA AATATTTATTTATTGGAAAAATGTAATAAAAAGTTTTTTAAAATTCCTCAAATATTAAGG AATTACCTTGATTCATTCAATACTGATGAATTTGTTTTTTAA
  • Download Fasta

  • Fasta :-

    MKMCIFFYVLLFFIYIIGIKDVRVECRKEYHIKKIPNGFTNKLIYNEIRGKNSNSINSVI YKRNILFHIRIPKKTLQGRNLFSNDIRNKKINEFLQKKKNSCYLHINSNVNEIKKKRDKI LKNVFLNAKLLQEYFNNFKSSLLYKYKNTKIITKLFLSTSFLVMILNVFGLRPEDIALHD KRIIRAFEFYRIITSALFYGDISLYVLTNIYMLYLQSQELEKSVGSSETLAFYLSQITIL SAICSYIKKPFYSTALLKSLLFTNCMLNPYNKSNLIFGINIYNMYLPYLSIVIDILHAQD FKASLSGILGIISGSIYYLSNIYLLEKCNKKFFKIPQILRNYLDSFNTDEFVF

    No Results
    No Results
No Results
No Results
No Results
PY17X_1319800


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India