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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1324500.fa
Sequence name : PY17X_1324500
Sequence length : 411
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.402
CoefTot : -1.618
ChDiff : 13
ZoneTo : 62
KR : 8
DE : 1
CleavSite : 41
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.088 2.718 0.623 0.861
MesoH : 1.014 1.562 0.074 0.607
MuHd_075 : 28.905 30.582 8.742 9.067
MuHd_095 : 18.046 14.788 4.566 4.375
MuHd_100 : 21.060 15.514 5.942 5.290
MuHd_105 : 30.770 21.617 9.554 7.594
Hmax_075 : -8.300 29.487 -3.977 8.867
Hmax_095 : 16.188 19.512 -5.603 6.895
Hmax_100 : 18.700 3.100 -4.934 1.060
Hmax_105 : -2.217 8.167 -2.261 2.987
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.7801 0.2199
DFMC : 0.4827 0.5173
This protein is probably imported in mitochondria.
f(Ser) = 0.0484 f(Arg) = 0.0323 CMi = 0.42017
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
411 PY17X_1324500
MNLLKLIGKNKKMKNHDKRNSAIYYACYAIIVLTIILSRFVVIPLILQMTLYTFITIYIGSHESIRQLEADDKTQKTDHI 80
TTYDAIMFPIIGSAALLTLYFAYKFLDPYYVNLLLTVYLTMAGVFSLQSVFSTVLEPFFPKFFKKDEFVKTINAPKFISK 160
DPIVFNTNKGEIMSLIVCFIIGARWIFYKDFITHNILAISFCFQALSLVILSNFVIGFILLSGLFVYDIFWVFGNDVMVT 240
VAKSFEAPVKLLFPVSLDPLHYSMLGLGDIIIPGILISLCLRFDYYLHRNKIHKGNVKKMFNDISIHESFKKYYFYTITV 320
FYQAGLILTYCMLFYFEHAQPALLYLVPACIIAIVGCALFKREFKIMIKYQEITDKSSNADDGKKKTLEKEETLKSQESI 400
MSVTKRKINAK 480
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
........... 480
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PY17X_1324500 5 --MNLLK|LI 0.073 .
PY17X_1324500 9 LLKLIGK|NK 0.061 .
PY17X_1324500 11 KLIGKNK|KM 0.060 .
PY17X_1324500 12 LIGKNKK|MK 0.093 .
PY17X_1324500 14 GKNKKMK|NH 0.083 .
PY17X_1324500 18 KMKNHDK|RN 0.076 .
PY17X_1324500 19 MKNHDKR|NS 0.263 .
PY17X_1324500 39 LTIILSR|FV 0.094 .
PY17X_1324500 66 GSHESIR|QL 0.126 .
PY17X_1324500 73 QLEADDK|TQ 0.057 .
PY17X_1324500 76 ADDKTQK|TD 0.057 .
PY17X_1324500 104 TLYFAYK|FL 0.082 .
PY17X_1324500 141 LEPFFPK|FF 0.070 .
PY17X_1324500 144 FFPKFFK|KD 0.063 .
PY17X_1324500 145 FPKFFKK|DE 0.146 .
PY17X_1324500 150 KKDEFVK|TI 0.064 .
PY17X_1324500 156 KTINAPK|FI 0.076 .
PY17X_1324500 160 APKFISK|DP 0.070 .
PY17X_1324500 169 IVFNTNK|GE 0.064 .
PY17X_1324500 184 CFIIGAR|WI 0.085 .
PY17X_1324500 189 ARWIFYK|DF 0.089 .
PY17X_1324500 243 VMVTVAK|SF 0.090 .
PY17X_1324500 250 SFEAPVK|LL 0.067 .
PY17X_1324500 282 LISLCLR|FD 0.079 .
PY17X_1324500 289 FDYYLHR|NK 0.087 .
PY17X_1324500 291 YYLHRNK|IH 0.054 .
PY17X_1324500 294 HRNKIHK|GN 0.091 .
PY17X_1324500 298 IHKGNVK|KM 0.062 .
PY17X_1324500 299 HKGNVKK|MF 0.134 .
PY17X_1324500 311 SIHESFK|KY 0.066 .
PY17X_1324500 312 IHESFKK|YY 0.116 .
PY17X_1324500 361 VGCALFK|RE 0.058 .
PY17X_1324500 362 GCALFKR|EF 0.186 .
PY17X_1324500 365 LFKREFK|IM 0.127 .
PY17X_1324500 369 EFKIMIK|YQ 0.061 .
PY17X_1324500 376 YQEITDK|SS 0.078 .
PY17X_1324500 384 SNADDGK|KK 0.065 .
PY17X_1324500 385 NADDGKK|KT 0.094 .
PY17X_1324500 386 ADDGKKK|TL 0.145 .
PY17X_1324500 390 KKKTLEK|EE 0.056 .
PY17X_1324500 395 EKEETLK|SQ 0.078 .
PY17X_1324500 405 SIMSVTK|RK 0.061 .
PY17X_1324500 406 IMSVTKR|KI 0.369 .
PY17X_1324500 407 MSVTKRK|IN 0.100 .
PY17X_1324500 411 KRKINAK|-- 0.081 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation