PY17X_1327900 | ubiquitin carboxyl-terminal hydrolase isozyme L3, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1327900OTHER0.9999690.0000280.000004
No Results

  • Fasta :-

    >PY17X_1327900 MTKKKIWIPIESNPDSLYLYSCKLGQQKLSFVDIYGFSKDLLDMIPKPVHAIIFLYPIKD DIDNNIGSSHINTTNDDSNIWFIKQTVSNSCGTIALLHLLANLRNTFPLDKDSVLDTFFN KVDHLKPEGRAMEFENSDIIEQLHHEFSGNELNSGESIDVDTHFIVFLEINGMLVELDGR KNHPIIHGQTTSTNFVYDAGKLIQDNFISKYQDCHSFSALAIVPNDTV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1327900.fa Sequence name : PY17X_1327900 Sequence length : 228 VALUES OF COMPUTED PARAMETERS Coef20 : 3.463 CoefTot : -0.592 ChDiff : -13 ZoneTo : 10 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.924 1.229 0.048 0.540 MesoH : -0.740 0.180 -0.468 0.211 MuHd_075 : 17.073 9.697 3.969 3.018 MuHd_095 : 23.358 12.109 6.194 4.143 MuHd_100 : 20.626 10.599 5.840 3.419 MuHd_105 : 14.670 8.161 4.339 2.667 Hmax_075 : 4.725 3.063 -1.669 2.450 Hmax_095 : 3.762 4.375 -0.695 3.124 Hmax_100 : 5.800 6.200 -0.076 3.590 Hmax_105 : 0.583 5.367 -2.087 2.835 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9064 0.0936 DFMC : 0.9024 0.0976
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 228 PY17X_1327900 MTKKKIWIPIESNPDSLYLYSCKLGQQKLSFVDIYGFSKDLLDMIPKPVHAIIFLYPIKDDIDNNIGSSHINTTNDDSNI 80 WFIKQTVSNSCGTIALLHLLANLRNTFPLDKDSVLDTFFNKVDHLKPEGRAMEFENSDIIEQLHHEFSGNELNSGESIDV 160 DTHFIVFLEINGMLVELDGRKNHPIIHGQTTSTNFVYDAGKLIQDNFISKYQDCHSFSALAIVPNDTV 240 ................................................................................ 80 ................................................................................ 160 .................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1327900 3 ----MTK|KK 0.062 . PY17X_1327900 4 ---MTKK|KI 0.100 . PY17X_1327900 5 --MTKKK|IW 0.170 . PY17X_1327900 23 LYLYSCK|LG 0.063 . PY17X_1327900 28 CKLGQQK|LS 0.060 . PY17X_1327900 39 DIYGFSK|DL 0.068 . PY17X_1327900 47 LLDMIPK|PV 0.084 . PY17X_1327900 59 IFLYPIK|DD 0.066 . PY17X_1327900 84 SNIWFIK|QT 0.066 . PY17X_1327900 104 HLLANLR|NT 0.078 . PY17X_1327900 111 NTFPLDK|DS 0.055 . PY17X_1327900 121 LDTFFNK|VD 0.058 . PY17X_1327900 126 NKVDHLK|PE 0.075 . PY17X_1327900 130 HLKPEGR|AM 0.100 . PY17X_1327900 180 LVELDGR|KN 0.087 . PY17X_1327900 181 VELDGRK|NH 0.064 . PY17X_1327900 201 FVYDAGK|LI 0.062 . PY17X_1327900 210 QDNFISK|YQ 0.066 . ____________________________^_________________

  • Fasta :-

    >PY17X_1327900 ATGACAAAAAAAAAAATATGGATACCAATAGAATCGAATCCCGATTCGTTGTATTTGTAC TCTTGTAAACTTGGACAACAAAAGTTAAGTTTTGTAGACATTTATGGTTTTAGCAAGGAT TTATTAGATATGATACCTAAACCTGTTCACGCAATAATATTCTTATATCCAATAAAGGAT GATATAGATAATAACATTGGTTCAAGTCACATAAATACAACAAATGACGATAGCAACATT TGGTTCATAAAGCAAACCGTCTCAAATTCTTGTGGTACTATAGCACTTTTGCATTTGCTT GCAAATTTGAGGAATACATTTCCATTAGATAAAGATTCCGTATTGGACACATTTTTTAAT AAAGTTGACCACCTAAAACCGGAAGGCCGCGCAATGGAATTTGAGAATAGCGATATTATT GAACAACTACACCATGAGTTTTCTGGAAATGAATTAAATTCAGGAGAAAGCATTGATGTT GACACACATTTTATTGTGTTCTTAGAAATAAATGGAATGCTAGTCGAATTGGATGGAAGA AAAAATCACCCCATAATTCATGGCCAAACCACGAGCACCAATTTTGTATATGATGCTGGA AAATTAATCCAAGATAACTTTATAAGCAAATATCAAGATTGCCACAGCTTTTCTGCCCTT GCAATTGTACCAAACGACACAGTGTAA
  • Download Fasta

  • Fasta :-

    MTKKKIWIPIESNPDSLYLYSCKLGQQKLSFVDIYGFSKDLLDMIPKPVHAIIFLYPIKD DIDNNIGSSHINTTNDDSNIWFIKQTVSNSCGTIALLHLLANLRNTFPLDKDSVLDTFFN KVDHLKPEGRAMEFENSDIIEQLHHEFSGNELNSGESIDVDTHFIVFLEINGMLVELDGR KNHPIIHGQTTSTNFVYDAGKLIQDNFISKYQDCHSFSALAIVPNDTV

  • title: catalytic site
  • coordinates: Q85,C91,H163,D178
No Results
No Results
IDSitePeptideScoreMethod
PY17X_1327900113 SLDKDSVLDT0.994unsp
PY17X_1327900


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India