PY17X_1336500 | derlin-1, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1336500OTHER0.9998630.0001050.000032
No Results

  • Fasta :-

    >PY17X_1336500 MVQLGELLSNIPLITRVYLILSSILMVLCSLDIISPLSLYLNWNLVLNEHQYWRLITCFL YFGSFGLHFFWDIYVLIYYCSSLEDVTFRNNSADFLWMIIVSCFMLLMVSYLFGGIYFYS SCIINVITYVWSKNNSSTRLTIFFFTIKASYLPWVLTILSLIVDYNSSDNFFGILVGHIY FFFTSVFPLMPIAKNTQIFKTPYLLKWMLRQEEGNRVA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1336500.fa Sequence name : PY17X_1336500 Sequence length : 218 VALUES OF COMPUTED PARAMETERS Coef20 : 4.161 CoefTot : -0.784 ChDiff : 0 ZoneTo : 71 KR : 2 DE : 3 CleavSite : 64 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.459 2.341 0.464 0.817 MesoH : 1.047 1.212 0.063 0.523 MuHd_075 : 25.669 22.278 7.636 5.888 MuHd_095 : 18.517 18.743 5.668 5.318 MuHd_100 : 24.309 21.341 7.089 6.927 MuHd_105 : 33.030 23.918 8.456 7.788 Hmax_075 : 7.000 13.400 -0.241 7.460 Hmax_095 : 14.087 27.037 1.704 7.341 Hmax_100 : 20.600 29.100 4.297 7.290 Hmax_105 : 17.300 29.983 3.659 7.677 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9772 0.0228 DFMC : 0.9596 0.0404
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 218 PY17X_1336500 MVQLGELLSNIPLITRVYLILSSILMVLCSLDIISPLSLYLNWNLVLNEHQYWRLITCFLYFGSFGLHFFWDIYVLIYYC 80 SSLEDVTFRNNSADFLWMIIVSCFMLLMVSYLFGGIYFYSSCIINVITYVWSKNNSSTRLTIFFFTIKASYLPWVLTILS 160 LIVDYNSSDNFFGILVGHIYFFFTSVFPLMPIAKNTQIFKTPYLLKWMLRQEEGNRVA 240 ................................................................................ 80 ................................................................................ 160 .......................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1336500 16 NIPLITR|VY 0.059 . PY17X_1336500 54 NEHQYWR|LI 0.087 . PY17X_1336500 89 LEDVTFR|NN 0.102 . PY17X_1336500 133 ITYVWSK|NN 0.065 . PY17X_1336500 139 KNNSSTR|LT 0.102 . PY17X_1336500 148 IFFFTIK|AS 0.053 . PY17X_1336500 194 PLMPIAK|NT 0.062 . PY17X_1336500 200 KNTQIFK|TP 0.056 . PY17X_1336500 206 KTPYLLK|WM 0.062 . PY17X_1336500 210 LLKWMLR|QE 0.097 . PY17X_1336500 216 RQEEGNR|VA 0.081 . ____________________________^_________________

  • Fasta :-

    >PY17X_1336500 ATGGTTCAACTCGGTGAGCTATTAAGTAACATTCCGCTAATAACTCGAGTGTATCTTATT CTTTCTTCAATTTTGATGGTTTTATGTTCTCTTGATATAATATCACCATTAAGTTTGTAT TTGAATTGGAACTTAGTATTGAACGAACATCAGTATTGGAGATTAATTACTTGCTTTTTG TACTTTGGGTCTTTTGGACTACATTTTTTTTGGGATATCTATGTATTAATATATTATTGC AGCTCCCTTGAAGATGTAACATTTCGAAATAATTCAGCTGACTTTTTGTGGATGATAATA GTGTCATGCTTCATGTTATTGATGGTTTCATACTTATTTGGAGGAATATACTTCTATAGT AGTTGTATTATAAACGTGATCACATATGTGTGGAGCAAGAACAATTCTTCTACAAGATTA ACGATATTTTTTTTTACGATAAAAGCTTCTTATCTTCCATGGGTTTTGACAATCTTATCT CTTATCGTGGATTACAACTCAAGTGATAATTTTTTTGGGATATTAGTTGGGCACATTTAT TTCTTTTTTACTAGCGTTTTTCCCCTTATGCCCATCGCAAAAAATACGCAAATTTTTAAG ACTCCTTACCTCCTGAAATGGATGTTAAGACAAGAAGAAGGAAATAGGGTAGCATAG
  • Download Fasta

  • Fasta :-

    MVQLGELLSNIPLITRVYLILSSILMVLCSLDIISPLSLYLNWNLVLNEHQYWRLITCFL YFGSFGLHFFWDIYVLIYYCSSLEDVTFRNNSADFLWMIIVSCFMLLMVSYLFGGIYFYS SCIINVITYVWSKNNSSTRLTIFFFTIKASYLPWVLTILSLIVDYNSSDNFFGILVGHIY FFFTSVFPLMPIAKNTQIFKTPYLLKWMLRQEEGNRVA

    No Results
No Results
No Results
No Results
PY17X_1336500


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India