PY17X_1351100 | signal peptidase complex catalytic subunit SEC11, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1351100OTHER0.9798530.0200210.000126
No Results

  • Fasta :-

    >PY17X_1351100 MDFIKEQYNSAILDLKKTFRNPRDSISHILNVICLLLNAFMIWKLLVVATGCESPIVVVL SGSMEPGYYRGDTLALYNPPIIHAGDVVVYQINGRDIPIVHRILNIHKTKDNQYHLLSKG DNNNIDDRGLYDTHQYWLENKHVLGLSVGYAPYIGMLTIWVNEYPTIKWGIVSLMLLMIL LGYE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1351100.fa Sequence name : PY17X_1351100 Sequence length : 184 VALUES OF COMPUTED PARAMETERS Coef20 : 3.849 CoefTot : 0.000 ChDiff : -2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.741 2.429 0.321 0.758 MesoH : 0.195 0.907 -0.121 0.409 MuHd_075 : 15.357 7.176 4.861 3.117 MuHd_095 : 37.048 21.468 10.876 6.926 MuHd_100 : 35.165 18.981 10.040 6.261 MuHd_105 : 22.981 11.571 6.434 3.935 Hmax_075 : 4.400 9.700 -0.473 3.810 Hmax_095 : 9.500 12.600 1.059 5.130 Hmax_100 : 14.500 14.500 2.499 5.370 Hmax_105 : -1.663 2.625 -2.265 1.942 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9766 0.0234 DFMC : 0.9768 0.0232
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 184 PY17X_1351100 MDFIKEQYNSAILDLKKTFRNPRDSISHILNVICLLLNAFMIWKLLVVATGCESPIVVVLSGSMEPGYYRGDTLALYNPP 80 IIHAGDVVVYQINGRDIPIVHRILNIHKTKDNQYHLLSKGDNNNIDDRGLYDTHQYWLENKHVLGLSVGYAPYIGMLTIW 160 VNEYPTIKWGIVSLMLLMILLGYE 240 ................................................................................ 80 ................................................................................ 160 ........................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1351100 5 --MDFIK|EQ 0.058 . PY17X_1351100 16 SAILDLK|KT 0.063 . PY17X_1351100 17 AILDLKK|TF 0.078 . PY17X_1351100 20 DLKKTFR|NP 0.102 . PY17X_1351100 23 KTFRNPR|DS 0.308 . PY17X_1351100 44 NAFMIWK|LL 0.060 . PY17X_1351100 70 MEPGYYR|GD 0.081 . PY17X_1351100 95 VYQINGR|DI 0.100 . PY17X_1351100 102 DIPIVHR|IL 0.075 . PY17X_1351100 108 RILNIHK|TK 0.062 . PY17X_1351100 110 LNIHKTK|DN 0.085 . PY17X_1351100 119 QYHLLSK|GD 0.063 . PY17X_1351100 128 NNNIDDR|GL 0.101 . PY17X_1351100 141 QYWLENK|HV 0.063 . PY17X_1351100 168 NEYPTIK|WG 0.063 . ____________________________^_________________

  • Fasta :-

    >PY17X_1351100 ATGGATTTCATAAAAGAACAATATAACTCGGCAATATTAGATCTTAAAAAAACATTTAGA AACCCAAGAGATAGTATATCTCACATATTAAATGTTATATGTTTGTTACTAAATGCTTTT ATGATATGGAAATTATTAGTAGTAGCTACAGGATGTGAATCACCTATTGTTGTTGTTTTA AGTGGAAGTATGGAACCAGGATATTACAGAGGAGATACTTTAGCTTTATACAACCCACCA ATTATACATGCTGGTGATGTTGTGGTATATCAAATAAATGGGAGAGATATTCCTATTGTT CATAGAATTTTAAATATTCATAAAACAAAAGATAATCAATATCATTTATTATCAAAAGGA GATAATAATAATATAGATGATAGAGGATTATATGATACACATCAATATTGGTTAGAAAAT AAACATGTTCTTGGACTATCAGTTGGATATGCACCATATATCGGAATGTTAACAATATGG GTTAATGAATATCCAACTATTAAATGGGGAATTGTTTCGTTGATGTTATTAATGATATTA CTTGGGTATGAATAA
  • Download Fasta

  • Fasta :-

    MDFIKEQYNSAILDLKKTFRNPRDSISHILNVICLLLNAFMIWKLLVVATGCESPIVVVL SGSMEPGYYRGDTLALYNPPIIHAGDVVVYQINGRDIPIVHRILNIHKTKDNQYHLLSKG DNNNIDDRGLYDTHQYWLENKHVLGLSVGYAPYIGMLTIWVNEYPTIKWGIVSLMLLMIL LGYE

  • title: Catalytic site
  • coordinates: S63,H101
No Results
No Results
IDSitePeptideScoreMethod
PY17X_135110025 SNPRDSISHI0.994unsp
PY17X_1351100


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India