PY17X_1405800 | site-2 protease S2P, putative

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_IDPredictionOTHERSPmTPCS_Position
PY17X_1405800OTHER0.9999870.0000000.000012
No Results

  • Fasta :-

    >PY17X_1405800 MTSRNIISYFNNVQTEKKQLSSNWLLIDNEKSYWDYKRQSYLSFILSLLPLFLISVIHLS IILNGYYIGHLFLTISYLLSICFFILYFYNSYTIFVLFVFLSFIISLCLHEFAHALVAYK YGDITMVYKGYLYLDILNYLDIFHTLIIPLITLFITGFGIPGNLYWLQLHFIRSRFQLSF IFLSGPISDILYILLFVFFYNMYTFLKNNKKLNVNPHPALFISLATSISFLVESFLLNIC PILGFDGWGVIEPYLPYFLNDLINEEIVYNFLSYVCPLLVFIYFNFIEAKFLFFTKITNY ILQDLLGIAIYHATFGADSFPTLYSYLKKM
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1405800.fa Sequence name : PY17X_1405800 Sequence length : 330 VALUES OF COMPUTED PARAMETERS Coef20 : 4.015 CoefTot : -0.355 ChDiff : -1 ZoneTo : 15 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.641 2.853 0.591 0.911 MesoH : 1.699 1.848 0.252 0.717 MuHd_075 : 18.621 9.478 3.851 4.839 MuHd_095 : 15.465 12.159 3.484 4.360 MuHd_100 : 16.988 14.807 4.981 5.430 MuHd_105 : 20.572 17.936 7.116 6.353 Hmax_075 : 2.917 1.750 -2.743 1.902 Hmax_095 : -0.262 3.500 -2.798 1.986 Hmax_100 : 1.700 7.800 -1.465 2.570 Hmax_105 : 5.017 13.183 -0.029 3.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8298 0.1702 DFMC : 0.8493 0.1507
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 330 PY17X_1405800 MTSRNIISYFNNVQTEKKQLSSNWLLIDNEKSYWDYKRQSYLSFILSLLPLFLISVIHLSIILNGYYIGHLFLTISYLLS 80 ICFFILYFYNSYTIFVLFVFLSFIISLCLHEFAHALVAYKYGDITMVYKGYLYLDILNYLDIFHTLIIPLITLFITGFGI 160 PGNLYWLQLHFIRSRFQLSFIFLSGPISDILYILLFVFFYNMYTFLKNNKKLNVNPHPALFISLATSISFLVESFLLNIC 240 PILGFDGWGVIEPYLPYFLNDLINEEIVYNFLSYVCPLLVFIYFNFIEAKFLFFTKITNYILQDLLGIAIYHATFGADSF 320 PTLYSYLKKM 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1405800 4 ---MTSR|NI 0.093 . PY17X_1405800 17 NNVQTEK|KQ 0.056 . PY17X_1405800 18 NVQTEKK|QL 0.097 . PY17X_1405800 31 LLIDNEK|SY 0.084 . PY17X_1405800 37 KSYWDYK|RQ 0.059 . PY17X_1405800 38 SYWDYKR|QS 0.156 . PY17X_1405800 120 HALVAYK|YG 0.063 . PY17X_1405800 129 DITMVYK|GY 0.057 . PY17X_1405800 173 LQLHFIR|SR 0.105 . PY17X_1405800 175 LHFIRSR|FQ 0.076 . PY17X_1405800 207 NMYTFLK|NN 0.058 . PY17X_1405800 210 TFLKNNK|KL 0.060 . PY17X_1405800 211 FLKNNKK|LN 0.075 . PY17X_1405800 290 FNFIEAK|FL 0.072 . PY17X_1405800 296 KFLFFTK|IT 0.069 . PY17X_1405800 328 TLYSYLK|KM 0.060 . PY17X_1405800 329 LYSYLKK|M- 0.133 . ____________________________^_________________

  • Fasta :-

    >PY17X_1405800 ATGACTTCAAGAAATATAATATCATATTTTAATAATGTTCAAACGGAGAAAAAACAATTA TCAAGTAATTGGTTGTTAATAGATAATGAAAAAAGTTATTGGGATTATAAACGTCAAAGC TATTTATCATTTATATTGTCATTACTACCATTATTTTTGATAAGTGTAATACATTTATCA ATTATACTGAATGGTTATTATATTGGGCATTTATTCTTAACAATATCATATTTGCTTTCC ATTTGTTTTTTTATTTTATACTTTTACAATTCTTATACTATATTTGTTTTGTTTGTATTT TTGTCATTTATAATATCCTTATGTTTACATGAGTTTGCTCATGCTTTAGTTGCTTACAAA TATGGCGATATTACAATGGTTTATAAAGGGTATTTATATTTGGACATTTTGAATTATTTG GACATATTCCATACGTTGATAATACCATTAATAACATTATTTATAACAGGATTTGGTATA CCAGGAAATTTATATTGGTTGCAACTGCATTTTATAAGAAGTAGATTTCAGTTATCTTTT ATATTTTTGTCTGGTCCAATATCAGATATTTTATATATTTTACTATTTGTTTTTTTTTAT AACATGTACACTTTTTTAAAAAATAATAAAAAATTGAATGTGAATCCCCATCCTGCTTTA TTCATATCTTTAGCAACATCAATATCTTTCCTAGTAGAATCATTTCTTTTAAATATTTGC CCTATTCTTGGATTTGATGGATGGGGTGTTATCGAGCCATATTTGCCTTATTTCTTAAAT GACTTAATCAACGAAGAGATTGTGTACAACTTCTTATCTTACGTGTGTCCACTTCTTGTT TTTATATATTTTAATTTTATTGAGGCAAAATTTCTTTTTTTCACAAAAATTACAAATTAT ATATTACAAGATCTTTTGGGAATTGCAATATATCATGCAACCTTTGGCGCCGATTCATTT CCAACATTGTATTCATATCTCAAAAAAATGTAA
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  • Fasta :-

    MTSRNIISYFNNVQTEKKQLSSNWLLIDNEKSYWDYKRQSYLSFILSLLPLFLISVIHLS IILNGYYIGHLFLTISYLLSICFFILYFYNSYTIFVLFVFLSFIISLCLHEFAHALVAYK YGDITMVYKGYLYLDILNYLDIFHTLIIPLITLFITGFGIPGNLYWLQLHFIRSRFQLSF IFLSGPISDILYILLFVFFYNMYTFLKNNKKLNVNPHPALFISLATSISFLVESFLLNIC PILGFDGWGVIEPYLPYFLNDLINEEIVYNFLSYVCPLLVFIYFNFIEAKFLFFTKITNY ILQDLLGIAIYHATFGADSFPTLYSYLKKM

    No Results
  • title: active site
  • coordinates: H110,E111,H114,N238,D246
No Results
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PY17X_1405800


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India