PY17X_1406600 | 26S protease regulatory subunit 10B, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1406600OTHER0.9999560.0000090.000034
No Results

  • Fasta :-

    >PY17X_1406600 MDNKESIRLYVKKVIEHREIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQVLK QLEDDKFIVKASSGPRYVVGCKSKINKSKLEIGTRVSLDMTTLTVMKRLPCEVDPLVFNM ISDIDKGENSTNKVNYNQIGGLSEQIRQMREVVELPILNPFLFKRVGIKTPKGVLLYGPP GTGKTLLARAMASNINCNFMRIVVSSIVDKYIGESARIIREMFTYAKEHQPCIIFMDEID AIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLD RKIEIPLPNETARIEILKIHANKMTKMGDIDYESVCRLCEGFNGADLRNVCTEAGMFAIR AMRDYVIEEDFYKAARKINEAKKLEGKLEYEKI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1406600.fa Sequence name : PY17X_1406600 Sequence length : 393 VALUES OF COMPUTED PARAMETERS Coef20 : 3.653 CoefTot : 0.000 ChDiff : 9 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.218 1.153 -0.080 0.412 MesoH : -0.649 0.405 -0.360 0.191 MuHd_075 : 43.922 23.200 12.534 9.932 MuHd_095 : 21.299 15.542 8.024 3.964 MuHd_100 : 20.585 14.459 6.331 3.256 MuHd_105 : 22.234 12.644 4.747 3.421 Hmax_075 : 3.500 11.200 -0.440 4.387 Hmax_095 : -5.075 8.100 -1.626 1.980 Hmax_100 : -11.000 5.500 -4.349 0.220 Hmax_105 : -9.000 5.600 -4.352 1.180 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8708 0.1292 DFMC : 0.9180 0.0820
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 393 PY17X_1406600 MDNKESIRLYVKKVIEHREIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQVLKQLEDDKFIVKASSGPRYVVG 80 CKSKINKSKLEIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKGENSTNKVNYNQIGGLSEQIRQMREVVELPILNP 160 FLFKRVGIKTPKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSSIVDKYIGESARIIREMFTYAKEHQPCIIFMDEID 240 AIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEILKIH 320 ANKMTKMGDIDYESVCRLCEGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYKAARKINEAKKLEGKLEYEKI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1406600 4 ---MDNK|ES 0.055 . PY17X_1406600 8 DNKESIR|LY 0.079 . PY17X_1406600 12 SIRLYVK|KV 0.072 . PY17X_1406600 13 IRLYVKK|VI 0.150 . PY17X_1406600 18 KKVIEHR|EI 0.102 . PY17X_1406600 23 HREIESK|VK 0.060 . PY17X_1406600 25 EIESKVK|KL 0.061 . PY17X_1406600 26 IESKVKK|LR 0.100 . PY17X_1406600 28 SKVKKLR|LD 0.108 . PY17X_1406600 32 KLRLDIK|EL 0.068 . PY17X_1406600 36 DIKELNK|KY 0.064 . PY17X_1406600 37 IKELNKK|YE 0.086 . PY17X_1406600 40 LNKKYEK|TE 0.055 . PY17X_1406600 46 KTEDNLK|AL 0.061 . PY17X_1406600 60 IIGQVLK|QL 0.068 . PY17X_1406600 66 KQLEDDK|FI 0.063 . PY17X_1406600 70 DDKFIVK|AS 0.060 . PY17X_1406600 76 KASSGPR|YV 0.132 . PY17X_1406600 82 RYVVGCK|SK 0.068 . PY17X_1406600 84 VVGCKSK|IN 0.066 . PY17X_1406600 87 CKSKINK|SK 0.104 . PY17X_1406600 89 SKINKSK|LE 0.074 . PY17X_1406600 95 KLEIGTR|VS 0.072 . PY17X_1406600 107 TTLTVMK|RL 0.057 . PY17X_1406600 108 TLTVMKR|LP 0.146 . PY17X_1406600 126 MISDIDK|GE 0.065 . PY17X_1406600 133 GENSTNK|VN 0.069 . PY17X_1406600 147 GLSEQIR|QM 0.125 . PY17X_1406600 150 EQIRQMR|EV 0.279 . PY17X_1406600 164 LNPFLFK|RV 0.083 . PY17X_1406600 165 NPFLFKR|VG 0.164 . PY17X_1406600 169 FKRVGIK|TP 0.063 . PY17X_1406600 172 VGIKTPK|GV 0.074 . PY17X_1406600 184 GPPGTGK|TL 0.060 . PY17X_1406600 189 GKTLLAR|AM 0.083 . PY17X_1406600 201 INCNFMR|IV 0.139 . PY17X_1406600 210 VSSIVDK|YI 0.108 . PY17X_1406600 217 YIGESAR|II 0.113 . PY17X_1406600 220 ESARIIR|EM 0.257 . PY17X_1406600 227 EMFTYAK|EH 0.060 . PY17X_1406600 245 IDAIGGR|RF 0.101 . PY17X_1406600 246 DAIGGRR|FS 0.106 . PY17X_1406600 255 QGTSADR|EI 0.077 . PY17X_1406600 259 ADREIQR|TL 0.105 . PY17X_1406600 278 EELGNVK|II 0.056 . PY17X_1406600 285 IIMATNR|PD 0.073 . PY17X_1406600 295 LDPALVR|PG 0.068 . PY17X_1406600 298 ALVRPGR|LD 0.235 . PY17X_1406600 301 RPGRLDR|KI 0.348 . PY17X_1406600 302 PGRLDRK|IE 0.071 . PY17X_1406600 313 LPNETAR|IE 0.114 . PY17X_1406600 318 ARIEILK|IH 0.064 . PY17X_1406600 323 LKIHANK|MT 0.073 . PY17X_1406600 326 HANKMTK|MG 0.069 . PY17X_1406600 337 DYESVCR|LC 0.072 . PY17X_1406600 348 FNGADLR|NV 0.153 . PY17X_1406600 360 AGMFAIR|AM 0.092 . PY17X_1406600 363 FAIRAMR|DY 0.313 . PY17X_1406600 373 IEEDFYK|AA 0.076 . PY17X_1406600 376 DFYKAAR|KI 0.093 . PY17X_1406600 377 FYKAARK|IN 0.084 . PY17X_1406600 382 RKINEAK|KL 0.088 . PY17X_1406600 383 KINEAKK|LE 0.117 . PY17X_1406600 387 AKKLEGK|LE 0.059 . PY17X_1406600 392 GKLEYEK|I- 0.057 . ____________________________^_________________

  • Fasta :-

    >PY17X_1406600 ATGGATAATAAAGAGAGCATAAGATTGTATGTGAAAAAAGTAATAGAACATAGAGAAATA GAAAGTAAAGTAAAAAAATTAAGATTAGATATAAAAGAATTGAATAAAAAATATGAAAAA ACAGAAGATAATTTAAAAGCCTTACAAAGTGTAGGGCAAATAATAGGACAAGTGTTAAAA CAATTAGAAGATGATAAGTTTATTGTGAAAGCATCAAGTGGACCCAGATATGTAGTAGGG TGTAAATCAAAAATAAATAAAAGTAAATTAGAAATTGGTACAAGAGTATCACTAGATATG ACAACATTAACAGTAATGAAAAGATTACCATGTGAAGTAGATCCATTAGTATTTAATATG ATAAGTGATATAGATAAGGGTGAGAATAGTACAAATAAAGTAAATTATAATCAAATAGGT GGATTAAGTGAACAAATAAGGCAAATGAGAGAGGTAGTTGAATTACCAATATTAAATCCA TTTTTATTCAAAAGAGTAGGAATTAAAACTCCTAAAGGTGTTTTATTATATGGTCCACCA GGAACAGGAAAAACATTATTAGCAAGAGCTATGGCTTCTAATATTAATTGTAATTTTATG AGAATAGTTGTTTCATCTATCGTTGATAAATACATTGGTGAAAGTGCTAGAATTATCAGA GAAATGTTTACATATGCTAAAGAGCACCAACCATGCATTATATTTATGGATGAAATTGAT GCCATTGGTGGACGAAGATTTTCTCAAGGTACTTCTGCTGATAGAGAAATTCAGAGAACA CTTATGGAGTTATTAAATCATTTAGATGGTTTTGAAGAGTTGGGAAATGTTAAAATTATT ATGGCTACTAATAGACCTGATGTATTAGATCCTGCTTTGGTTAGACCTGGAAGATTAGAT AGAAAAATTGAAATTCCTTTACCAAATGAAACAGCAAGAATTGAAATTTTGAAAATACAT GCAAATAAAATGACTAAAATGGGGGATATAGATTATGAGTCTGTTTGCCGATTATGTGAA GGTTTTAACGGAGCGGATTTAAGGAATGTATGTACTGAAGCAGGAATGTTTGCTATCAGG GCTATGCGTGATTATGTTATTGAGGAAGATTTTTATAAAGCTGCTCGAAAAATTAACGAA GCCAAAAAATTAGAAGGGAAGCTAGAATATGAAAAAATATAA
  • Download Fasta

  • Fasta :-

    MDNKESIRLYVKKVIEHREIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQVLK QLEDDKFIVKASSGPRYVVGCKSKINKSKLEIGTRVSLDMTTLTVMKRLPCEVDPLVFNM ISDIDKGENSTNKVNYNQIGGLSEQIRQMREVVELPILNPFLFKRVGIKTPKGVLLYGPP GTGKTLLARAMASNINCNFMRIVVSSIVDKYIGESARIIREMFTYAKEHQPCIIFMDEID AIGGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLD RKIEIPLPNETARIEILKIHANKMTKMGDIDYESVCRLCEGFNGADLRNVCTEAGMFAIR AMRDYVIEEDFYKAARKINEAKKLEGKLEYEKI

  • title: ATP binding site
  • coordinates: P179,P180,G181,T182,G183,K184,T185,L186,D237,N284
No Results
No Results
IDSitePeptideScoreMethod
PY17X_1406600248 SGRRFSQGTS0.994unsp
PY17X_1406600


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India