Warning : mysqli_connect(): (HY000/1045): Access denied for user 'root'@'localhost' (using password: YES) in /opt/lampp/htdocs/ProtPathDB/database/db_connect.php on line 2
Failed to connect to MySQL: Access denied for user 'root'@'localhost' (using password: YES)
ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1420400.fa
Sequence name : PY17X_1420400
Sequence length : 328
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.731
CoefTot : -4.901
ChDiff : 31
ZoneTo : 91
KR : 21
DE : 2
CleavSite : 92
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.029 1.935 0.151 0.675
MesoH : -0.051 0.754 -0.189 0.348
MuHd_075 : 37.337 25.345 13.251 8.623
MuHd_095 : 47.671 28.994 15.555 10.409
MuHd_100 : 52.441 33.367 17.144 11.186
MuHd_105 : 49.513 35.535 17.337 10.771
Hmax_075 : 11.700 12.017 3.456 4.515
Hmax_095 : 14.400 13.300 3.474 5.310
Hmax_100 : 17.100 14.700 4.109 5.170
Hmax_105 : 18.700 19.200 4.815 6.150
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0530 0.9470
DFMC : 0.0781 0.9219
This protein is probably imported in mitochondria.
f(Ser) = 0.0879 f(Arg) = 0.0659 CMi = 0.54164
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
328 PY17X_1420400
MNRYYHYIRNIYSSKCFKNESFFYSKINLKFVSYNTKNDTHKYSAKINNGYTFRKNVNLKKIKNFPKSINNMPHSCYRTY 80
LLKKYGLTKRREGYNINKDNIKRYFNFVRIYHSLNFIKNIILCLLFIYGVNNYVFDMTLTSGSSMYPLINKNGVILFYIC 160
DCSLRFFNELRNIAIYNYINILYKIYNIIHRNFDNINFVKVKNTIANKIENLKNQIKSNKHVYKRGDVVLLISPVNSNKR 240
VCKRIIGMEHDKLFVNDFNSFVEIPKNHIWVEGDNKLDSFDSRNYGCVNINLVIGKIFFLLDPFRSFSFITNKRNYEIES 320
NKFLYMSN 400
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
........ 400
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PY17X_1420400 3 ----MNR|YY 0.111 .
PY17X_1420400 9 RYYHYIR|NI 0.086 .
PY17X_1420400 15 RNIYSSK|CF 0.063 .
PY17X_1420400 18 YSSKCFK|NE 0.064 .
PY17X_1420400 26 ESFFYSK|IN 0.057 .
PY17X_1420400 30 YSKINLK|FV 0.079 .
PY17X_1420400 37 FVSYNTK|ND 0.065 .
PY17X_1420400 42 TKNDTHK|YS 0.093 .
PY17X_1420400 46 THKYSAK|IN 0.077 .
PY17X_1420400 54 NNGYTFR|KN 0.078 .
PY17X_1420400 55 NGYTFRK|NV 0.087 .
PY17X_1420400 60 RKNVNLK|KI 0.072 .
PY17X_1420400 61 KNVNLKK|IK 0.077 .
PY17X_1420400 63 VNLKKIK|NF 0.067 .
PY17X_1420400 67 KIKNFPK|SI 0.114 .
PY17X_1420400 78 MPHSCYR|TY 0.084 .
PY17X_1420400 83 YRTYLLK|KY 0.060 .
PY17X_1420400 84 RTYLLKK|YG 0.101 .
PY17X_1420400 89 KKYGLTK|RR 0.062 .
PY17X_1420400 90 KYGLTKR|RE 0.134 .
PY17X_1420400 91 YGLTKRR|EG 0.106 .
PY17X_1420400 98 EGYNINK|DN 0.067 .
PY17X_1420400 102 INKDNIK|RY 0.061 .
PY17X_1420400 103 NKDNIKR|YF 0.164 .
PY17X_1420400 109 RYFNFVR|IY 0.089 .
PY17X_1420400 118 HSLNFIK|NI 0.067 .
PY17X_1420400 151 MYPLINK|NG 0.050 .
PY17X_1420400 165 ICDCSLR|FF 0.086 .
PY17X_1420400 171 RFFNELR|NI 0.080 .
PY17X_1420400 184 YINILYK|IY 0.071 .
PY17X_1420400 191 IYNIIHR|NF 0.095 .
PY17X_1420400 200 DNINFVK|VK 0.062 .
PY17X_1420400 202 INFVKVK|NT 0.071 .
PY17X_1420400 208 KNTIANK|IE 0.054 .
PY17X_1420400 213 NKIENLK|NQ 0.061 .
PY17X_1420400 217 NLKNQIK|SN 0.081 .
PY17X_1420400 220 NQIKSNK|HV 0.096 .
PY17X_1420400 224 SNKHVYK|RG 0.083 .
PY17X_1420400 225 NKHVYKR|GD 0.222 .
PY17X_1420400 239 SPVNSNK|RV 0.084 .
PY17X_1420400 240 PVNSNKR|VC 0.175 .
PY17X_1420400 243 SNKRVCK|RI 0.241 .
PY17X_1420400 244 NKRVCKR|II 0.329 .
PY17X_1420400 252 IGMEHDK|LF 0.061 .
PY17X_1420400 266 SFVEIPK|NH 0.065 .
PY17X_1420400 276 WVEGDNK|LD 0.056 .
PY17X_1420400 283 LDSFDSR|NY 0.127 .
PY17X_1420400 296 INLVIGK|IF 0.060 .
PY17X_1420400 305 FLLDPFR|SF 0.112 .
PY17X_1420400 313 FSFITNK|RN 0.065 .
PY17X_1420400 314 SFITNKR|NY 0.145 .
PY17X_1420400 322 YEIESNK|FL 0.068 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation