PY17X_1427300 | trypsin-like serine protease, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1427300OTHER0.8534320.0215580.125011
No Results

  • Fasta :-

    >PY17X_1427300 MKKSKLSLFKSVLKYSWRTPLFCYSTIFIHSSVNSLLDSYNDKEKGVYKDKRKNNFDFFA TISLKTIPISYCSSQLVYKRDNNNNILPTETEYNNLELFKRVFFKLIQYEYFIIHKIIGC INESIIFVLYSLANFYLYFHSLFFNICNLLSKIYHGQGNNGVLYTYPNIPYNIINSFVTI HKIYEHNKIPLKHDFKNDQLEYMGSGFIYDKRGYILTAAHNITNLEDKFVVKNGNGLYFA TVLGLHKESDVCVMKINSKEPLSYISLDKIRDDLKQGEPVVTYGQIQNFDKETYSVGIVN HPKQTFTKFENFNENGQTTFYPFIQISNPINKGMSGSPLLDQHGNLVGMIQKKIDNYGLA LPANILKNVAIHLQNKGVYKEPFLGIVFRDKGLIIQNSRPLTKELKISSILANSPADLGN LKKEDIISKINNKDIESICDVHEILNSTSDRYINVDGIRNDKKFKTQIKLW
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1427300.fa Sequence name : PY17X_1427300 Sequence length : 471 VALUES OF COMPUTED PARAMETERS Coef20 : 4.368 CoefTot : 0.258 ChDiff : 14 ZoneTo : 37 KR : 6 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.276 1.829 0.260 0.663 MesoH : 0.229 0.685 -0.203 0.408 MuHd_075 : 33.712 22.837 9.341 7.231 MuHd_095 : 41.680 22.130 11.671 8.516 MuHd_100 : 30.729 18.387 10.253 7.262 MuHd_105 : 28.040 17.093 8.846 5.845 Hmax_075 : 17.200 17.500 2.023 6.230 Hmax_095 : 9.900 9.625 0.737 3.736 Hmax_100 : 3.500 6.700 2.989 2.940 Hmax_105 : 12.512 15.600 3.938 5.612 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0513 0.9487 DFMC : 0.1191 0.8809 This protein is probably imported in chloroplast. f(Ser) = 0.2162 f(Arg) = 0.0270 CMi = 2.00501 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 471 PY17X_1427300 MKKSKLSLFKSVLKYSWRTPLFCYSTIFIHSSVNSLLDSYNDKEKGVYKDKRKNNFDFFATISLKTIPISYCSSQLVYKR 80 DNNNNILPTETEYNNLELFKRVFFKLIQYEYFIIHKIIGCINESIIFVLYSLANFYLYFHSLFFNICNLLSKIYHGQGNN 160 GVLYTYPNIPYNIINSFVTIHKIYEHNKIPLKHDFKNDQLEYMGSGFIYDKRGYILTAAHNITNLEDKFVVKNGNGLYFA 240 TVLGLHKESDVCVMKINSKEPLSYISLDKIRDDLKQGEPVVTYGQIQNFDKETYSVGIVNHPKQTFTKFENFNENGQTTF 320 YPFIQISNPINKGMSGSPLLDQHGNLVGMIQKKIDNYGLALPANILKNVAIHLQNKGVYKEPFLGIVFRDKGLIIQNSRP 400 LTKELKISSILANSPADLGNLKKEDIISKINNKDIESICDVHEILNSTSDRYINVDGIRNDKKFKTQIKLW 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1427300 2 -----MK|KS 0.061 . PY17X_1427300 3 ----MKK|SK 0.128 . PY17X_1427300 5 --MKKSK|LS 0.058 . PY17X_1427300 10 SKLSLFK|SV 0.091 . PY17X_1427300 14 LFKSVLK|YS 0.058 . PY17X_1427300 18 VLKYSWR|TP 0.073 . PY17X_1427300 43 LDSYNDK|EK 0.073 . PY17X_1427300 45 SYNDKEK|GV 0.087 . PY17X_1427300 49 KEKGVYK|DK 0.084 . PY17X_1427300 51 KGVYKDK|RK 0.059 . PY17X_1427300 52 GVYKDKR|KN 0.168 . PY17X_1427300 53 VYKDKRK|NN 0.092 . PY17X_1427300 65 FATISLK|TI 0.058 . PY17X_1427300 79 SSQLVYK|RD 0.060 . PY17X_1427300 80 SQLVYKR|DN 0.173 . PY17X_1427300 100 NNLELFK|RV 0.074 . PY17X_1427300 101 NLELFKR|VF 0.154 . PY17X_1427300 105 FKRVFFK|LI 0.078 . PY17X_1427300 116 EYFIIHK|II 0.068 . PY17X_1427300 152 ICNLLSK|IY 0.071 . PY17X_1427300 182 SFVTIHK|IY 0.060 . PY17X_1427300 188 KIYEHNK|IP 0.059 . PY17X_1427300 192 HNKIPLK|HD 0.062 . PY17X_1427300 196 PLKHDFK|ND 0.060 . PY17X_1427300 211 SGFIYDK|RG 0.056 . PY17X_1427300 212 GFIYDKR|GY 0.136 . PY17X_1427300 228 ITNLEDK|FV 0.102 . PY17X_1427300 232 EDKFVVK|NG 0.060 . PY17X_1427300 247 TVLGLHK|ES 0.059 . PY17X_1427300 255 SDVCVMK|IN 0.073 . PY17X_1427300 259 VMKINSK|EP 0.053 . PY17X_1427300 269 SYISLDK|IR 0.060 . PY17X_1427300 271 ISLDKIR|DD 0.115 . PY17X_1427300 275 KIRDDLK|QG 0.068 . PY17X_1427300 291 QIQNFDK|ET 0.071 . PY17X_1427300 303 GIVNHPK|QT 0.090 . PY17X_1427300 308 PKQTFTK|FE 0.076 . PY17X_1427300 332 ISNPINK|GM 0.076 . PY17X_1427300 352 LVGMIQK|KI 0.066 . PY17X_1427300 353 VGMIQKK|ID 0.106 . PY17X_1427300 367 LPANILK|NV 0.081 . PY17X_1427300 376 AIHLQNK|GV 0.092 . PY17X_1427300 380 QNKGVYK|EP 0.067 . PY17X_1427300 389 FLGIVFR|DK 0.162 . PY17X_1427300 391 GIVFRDK|GL 0.069 . PY17X_1427300 399 LIIQNSR|PL 0.092 . PY17X_1427300 403 NSRPLTK|EL 0.062 . PY17X_1427300 406 PLTKELK|IS 0.059 . PY17X_1427300 422 ADLGNLK|KE 0.055 . PY17X_1427300 423 DLGNLKK|ED 0.088 . PY17X_1427300 429 KEDIISK|IN 0.063 . PY17X_1427300 433 ISKINNK|DI 0.082 . PY17X_1427300 451 LNSTSDR|YI 0.128 . PY17X_1427300 459 INVDGIR|ND 0.082 . PY17X_1427300 462 DGIRNDK|KF 0.102 . PY17X_1427300 463 GIRNDKK|FK 0.147 . PY17X_1427300 465 RNDKKFK|TQ 0.064 . PY17X_1427300 469 KFKTQIK|LW 0.066 . ____________________________^_________________

  • Fasta :-

    >PY17X_1427300 ATGAAAAAAAGCAAATTGTCGCTATTTAAAAGTGTATTAAAATATTCTTGGCGAACACCT TTATTTTGTTATTCAACAATATTTATTCATAGTTCAGTGAATAGTCTATTAGATTCATAT AATGATAAAGAAAAGGGTGTATATAAAGATAAAAGAAAAAATAACTTTGATTTTTTCGCC ACCATTTCATTAAAAACCATTCCCATATCATATTGCAGTTCCCAACTTGTATATAAACGT GATAATAATAATAATATATTACCTACTGAAACAGAATATAATAATTTAGAATTATTCAAG CGTGTGTTTTTTAAATTAATACAATATGAATATTTTATAATTCATAAAATAATTGGTTGT ATTAATGAGTCTATAATATTTGTTTTATATTCTTTAGCTAATTTTTATTTATATTTTCAT AGCCTATTCTTTAACATATGTAATCTATTAAGTAAAATATATCACGGCCAGGGTAATAAT GGTGTGTTATATACATATCCTAATATTCCTTATAACATTATTAACAGTTTTGTAACTATT CATAAAATTTATGAACATAATAAAATACCATTAAAGCATGATTTTAAAAATGACCAATTG GAATATATGGGTTCCGGATTCATCTATGACAAAAGGGGATACATATTAACAGCTGCTCAC AACATAACCAATCTAGAAGACAAATTTGTTGTAAAAAATGGTAATGGTTTATACTTTGCA ACTGTGCTTGGTTTGCATAAAGAATCAGACGTTTGCGTGATGAAAATTAATTCTAAAGAA CCGCTTTCTTATATCTCTTTAGACAAAATAAGAGATGATTTAAAGCAAGGAGAACCCGTA GTCACATATGGACAGATACAAAATTTTGATAAAGAAACTTATAGTGTTGGTATAGTAAAC CATCCAAAGCAAACTTTTACAAAGTTTGAAAATTTTAATGAAAACGGGCAGACTACCTTT TATCCATTTATTCAAATAAGCAACCCTATAAATAAAGGTATGTCTGGTTCACCATTACTT GATCAGCATGGGAACCTCGTAGGAATGATACAAAAAAAAATCGACAATTATGGATTGGCT TTACCTGCGAATATTCTAAAAAATGTAGCTATTCATTTACAAAATAAGGGAGTATATAAG GAACCATTTTTAGGTATTGTGTTTAGAGACAAGGGACTCATAATTCAAAATTCCAGACCT CTCACAAAAGAGTTGAAAATTTCCAGCATTTTAGCTAACTCACCAGCCGATCTGGGCAAC TTGAAAAAAGAAGATATAATTTCAAAGATTAACAATAAAGACATCGAAAGCATTTGTGAT GTACACGAAATTCTCAATAGTACAAGTGATAGATATATAAATGTTGATGGGATTCGAAAT GACAAAAAATTTAAAACACAGATAAAACTATGGTGA
  • Download Fasta

  • Fasta :-

    MKKSKLSLFKSVLKYSWRTPLFCYSTIFIHSSVNSLLDSYNDKEKGVYKDKRKNNFDFFA TISLKTIPISYCSSQLVYKRDNNNNILPTETEYNNLELFKRVFFKLIQYEYFIIHKIIGC INESIIFVLYSLANFYLYFHSLFFNICNLLSKIYHGQGNNGVLYTYPNIPYNIINSFVTI HKIYEHNKIPLKHDFKNDQLEYMGSGFIYDKRGYILTAAHNITNLEDKFVVKNGNGLYFA TVLGLHKESDVCVMKINSKEPLSYISLDKIRDDLKQGEPVVTYGQIQNFDKETYSVGIVN HPKQTFTKFENFNENGQTTFYPFIQISNPINKGMSGSPLLDQHGNLVGMIQKKIDNYGLA LPANILKNVAIHLQNKGVYKEPFLGIVFRDKGLIIQNSRPLTKELKISSILANSPADLGN LKKEDIISKINNKDIESICDVHEILNSTSDRYINVDGIRNDKKFKTQIKLW

  • title: protein binding site
  • coordinates: F383,L384,G385,I386,F388,S437,I438,V441,H442
No Results
No Results
IDSitePeptideScoreMethod
PY17X_1427300414 SILANSPADL0.991unsp
PY17X_1427300


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India