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ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1427300.fa
Sequence name : PY17X_1427300
Sequence length : 471
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.368
CoefTot : 0.258
ChDiff : 14
ZoneTo : 37
KR : 6
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.276 1.829 0.260 0.663
MesoH : 0.229 0.685 -0.203 0.408
MuHd_075 : 33.712 22.837 9.341 7.231
MuHd_095 : 41.680 22.130 11.671 8.516
MuHd_100 : 30.729 18.387 10.253 7.262
MuHd_105 : 28.040 17.093 8.846 5.845
Hmax_075 : 17.200 17.500 2.023 6.230
Hmax_095 : 9.900 9.625 0.737 3.736
Hmax_100 : 3.500 6.700 2.989 2.940
Hmax_105 : 12.512 15.600 3.938 5.612
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0513 0.9487
DFMC : 0.1191 0.8809
This protein is probably imported in chloroplast.
f(Ser) = 0.2162 f(Arg) = 0.0270 CMi = 2.00501
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
471 PY17X_1427300
MKKSKLSLFKSVLKYSWRTPLFCYSTIFIHSSVNSLLDSYNDKEKGVYKDKRKNNFDFFATISLKTIPISYCSSQLVYKR 80
DNNNNILPTETEYNNLELFKRVFFKLIQYEYFIIHKIIGCINESIIFVLYSLANFYLYFHSLFFNICNLLSKIYHGQGNN 160
GVLYTYPNIPYNIINSFVTIHKIYEHNKIPLKHDFKNDQLEYMGSGFIYDKRGYILTAAHNITNLEDKFVVKNGNGLYFA 240
TVLGLHKESDVCVMKINSKEPLSYISLDKIRDDLKQGEPVVTYGQIQNFDKETYSVGIVNHPKQTFTKFENFNENGQTTF 320
YPFIQISNPINKGMSGSPLLDQHGNLVGMIQKKIDNYGLALPANILKNVAIHLQNKGVYKEPFLGIVFRDKGLIIQNSRP 400
LTKELKISSILANSPADLGNLKKEDIISKINNKDIESICDVHEILNSTSDRYINVDGIRNDKKFKTQIKLW 480
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
....................................................................... 480
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PY17X_1427300 2 -----MK|KS 0.061 .
PY17X_1427300 3 ----MKK|SK 0.128 .
PY17X_1427300 5 --MKKSK|LS 0.058 .
PY17X_1427300 10 SKLSLFK|SV 0.091 .
PY17X_1427300 14 LFKSVLK|YS 0.058 .
PY17X_1427300 18 VLKYSWR|TP 0.073 .
PY17X_1427300 43 LDSYNDK|EK 0.073 .
PY17X_1427300 45 SYNDKEK|GV 0.087 .
PY17X_1427300 49 KEKGVYK|DK 0.084 .
PY17X_1427300 51 KGVYKDK|RK 0.059 .
PY17X_1427300 52 GVYKDKR|KN 0.168 .
PY17X_1427300 53 VYKDKRK|NN 0.092 .
PY17X_1427300 65 FATISLK|TI 0.058 .
PY17X_1427300 79 SSQLVYK|RD 0.060 .
PY17X_1427300 80 SQLVYKR|DN 0.173 .
PY17X_1427300 100 NNLELFK|RV 0.074 .
PY17X_1427300 101 NLELFKR|VF 0.154 .
PY17X_1427300 105 FKRVFFK|LI 0.078 .
PY17X_1427300 116 EYFIIHK|II 0.068 .
PY17X_1427300 152 ICNLLSK|IY 0.071 .
PY17X_1427300 182 SFVTIHK|IY 0.060 .
PY17X_1427300 188 KIYEHNK|IP 0.059 .
PY17X_1427300 192 HNKIPLK|HD 0.062 .
PY17X_1427300 196 PLKHDFK|ND 0.060 .
PY17X_1427300 211 SGFIYDK|RG 0.056 .
PY17X_1427300 212 GFIYDKR|GY 0.136 .
PY17X_1427300 228 ITNLEDK|FV 0.102 .
PY17X_1427300 232 EDKFVVK|NG 0.060 .
PY17X_1427300 247 TVLGLHK|ES 0.059 .
PY17X_1427300 255 SDVCVMK|IN 0.073 .
PY17X_1427300 259 VMKINSK|EP 0.053 .
PY17X_1427300 269 SYISLDK|IR 0.060 .
PY17X_1427300 271 ISLDKIR|DD 0.115 .
PY17X_1427300 275 KIRDDLK|QG 0.068 .
PY17X_1427300 291 QIQNFDK|ET 0.071 .
PY17X_1427300 303 GIVNHPK|QT 0.090 .
PY17X_1427300 308 PKQTFTK|FE 0.076 .
PY17X_1427300 332 ISNPINK|GM 0.076 .
PY17X_1427300 352 LVGMIQK|KI 0.066 .
PY17X_1427300 353 VGMIQKK|ID 0.106 .
PY17X_1427300 367 LPANILK|NV 0.081 .
PY17X_1427300 376 AIHLQNK|GV 0.092 .
PY17X_1427300 380 QNKGVYK|EP 0.067 .
PY17X_1427300 389 FLGIVFR|DK 0.162 .
PY17X_1427300 391 GIVFRDK|GL 0.069 .
PY17X_1427300 399 LIIQNSR|PL 0.092 .
PY17X_1427300 403 NSRPLTK|EL 0.062 .
PY17X_1427300 406 PLTKELK|IS 0.059 .
PY17X_1427300 422 ADLGNLK|KE 0.055 .
PY17X_1427300 423 DLGNLKK|ED 0.088 .
PY17X_1427300 429 KEDIISK|IN 0.063 .
PY17X_1427300 433 ISKINNK|DI 0.082 .
PY17X_1427300 451 LNSTSDR|YI 0.128 .
PY17X_1427300 459 INVDGIR|ND 0.082 .
PY17X_1427300 462 DGIRNDK|KF 0.102 .
PY17X_1427300 463 GIRNDKK|FK 0.147 .
PY17X_1427300 465 RNDKKFK|TQ 0.064 .
PY17X_1427300 469 KFKTQIK|LW 0.066 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation