Warning : mysqli_connect(): (HY000/1045): Access denied for user 'root'@'localhost' (using password: YES) in /opt/lampp/htdocs/ProtPathDB/database/db_connect.php on line 2
Failed to connect to MySQL: Access denied for user 'root'@'localhost' (using password: YES)
ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1427400.fa
Sequence name : PY17X_1427400
Sequence length : 291
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.553
CoefTot : -0.219
ChDiff : 23
ZoneTo : 38
KR : 4
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 2.088 2.253 0.437 0.828
MesoH : -1.277 0.269 -0.491 0.156
MuHd_075 : 18.309 18.774 7.173 4.940
MuHd_095 : 18.813 18.640 7.178 4.726
MuHd_100 : 17.833 17.560 7.384 5.101
MuHd_105 : 18.682 14.226 5.802 5.078
Hmax_075 : 16.700 17.800 3.377 7.960
Hmax_095 : 18.700 21.900 5.686 6.440
Hmax_100 : 11.800 26.400 3.445 8.900
Hmax_105 : 16.000 24.300 1.339 7.009
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.6727 0.3273
DFMC : 0.8077 0.1923
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
291 PY17X_1427400
MLNAKTSKIYCILFILFLYINTILTWCFIHIKSQTKSLDYPRTRIYENINKKEDLEYKPFKNISFNKLKTSLKNFLVSNK 80
KINISDVKYVSFLGKYYNYEKIDNYGVNEICILGRSNVGKSTFLRNFIKYLINVNDNTNIKVSKRSGCTRSINLYSFENA 160
KKKKLFILTDMPGLGYAEGIGEKKMEYLKKNLDDYVYLRNQICLFFILIDMSVDIQKIDISLVDSIRKTGIPLRVICTKC 240
DKFNGNVNHRLNGIKTFYKLEKTPIHISKFSNHNYINIFKEIQYHCNLGNS 320
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................... 320
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PY17X_1427400 5 --MLNAK|TS 0.057 .
PY17X_1427400 8 LNAKTSK|IY 0.071 .
PY17X_1427400 32 WCFIHIK|SQ 0.085 .
PY17X_1427400 36 HIKSQTK|SL 0.082 .
PY17X_1427400 42 KSLDYPR|TR 0.071 .
PY17X_1427400 44 LDYPRTR|IY 0.101 .
PY17X_1427400 51 IYENINK|KE 0.055 .
PY17X_1427400 52 YENINKK|ED 0.082 .
PY17X_1427400 58 KEDLEYK|PF 0.058 .
PY17X_1427400 61 LEYKPFK|NI 0.069 .
PY17X_1427400 67 KNISFNK|LK 0.061 .
PY17X_1427400 69 ISFNKLK|TS 0.065 .
PY17X_1427400 73 KLKTSLK|NF 0.058 .
PY17X_1427400 80 NFLVSNK|KI 0.060 .
PY17X_1427400 81 FLVSNKK|IN 0.076 .
PY17X_1427400 88 INISDVK|YV 0.083 .
PY17X_1427400 95 YVSFLGK|YY 0.072 .
PY17X_1427400 101 KYYNYEK|ID 0.060 .
PY17X_1427400 115 EICILGR|SN 0.104 .
PY17X_1427400 120 GRSNVGK|ST 0.132 .
PY17X_1427400 125 GKSTFLR|NF 0.128 .
PY17X_1427400 129 FLRNFIK|YL 0.078 .
PY17X_1427400 141 NDNTNIK|VS 0.061 .
PY17X_1427400 144 TNIKVSK|RS 0.071 .
PY17X_1427400 145 NIKVSKR|SG 0.258 .
PY17X_1427400 150 KRSGCTR|SI 0.173 .
PY17X_1427400 161 YSFENAK|KK 0.057 .
PY17X_1427400 162 SFENAKK|KK 0.095 .
PY17X_1427400 163 FENAKKK|KL 0.133 .
PY17X_1427400 164 ENAKKKK|LF 0.098 .
PY17X_1427400 183 AEGIGEK|KM 0.056 .
PY17X_1427400 184 EGIGEKK|ME 0.072 .
PY17X_1427400 189 KKMEYLK|KN 0.056 .
PY17X_1427400 190 KMEYLKK|NL 0.132 .
PY17X_1427400 199 DDYVYLR|NQ 0.074 .
PY17X_1427400 217 MSVDIQK|ID 0.062 .
PY17X_1427400 227 SLVDSIR|KT 0.101 .
PY17X_1427400 228 LVDSIRK|TG 0.065 .
PY17X_1427400 234 KTGIPLR|VI 0.090 .
PY17X_1427400 239 LRVICTK|CD 0.066 .
PY17X_1427400 242 ICTKCDK|FN 0.070 .
PY17X_1427400 250 NGNVNHR|LN 0.104 .
PY17X_1427400 255 HRLNGIK|TF 0.073 .
PY17X_1427400 259 GIKTFYK|LE 0.060 .
PY17X_1427400 262 TFYKLEK|TP 0.065 .
PY17X_1427400 269 TPIHISK|FS 0.085 .
PY17X_1427400 280 NYINIFK|EI 0.059 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation