PY17X_1444100 | ataxin-3, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1444100OTHER0.9999450.0000140.000041
No Results

  • Fasta :-

    >PY17X_1444100 MSKKYVYWEKQGNDRMCGLHCINSILQGPYYSEDVLAKIGKELDEKEKEFLKLSSNELIR TNSSNVLDDGFINISVLIESLRRKNILLKNAFEEDLTKIISSGHQDIGYICNLEQHWFSV RKIHNTWYVLDSLKSAPLFIKDINLKCYFNDIFKKYHIFSVQNMNPYISLPKPDINFEPK NPNQFYIPTNQISEISSVSNGFILEDKYNMNKSENGSLFSSFNKPQNFQWPKNGGRKLND DINNISSNNIDDDGDDDFKTALRLSMEEYIKNLPPPKSEDLINEDFINVMIKLPNKKIQR KFGISKTLADIFYWIEYESVNNQQIDSSLIFKNCYYLYQLFPRRKFCKYQNGSIELQVGD KVELVHDKSLKDMKFEKEETFMMQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1444100.fa Sequence name : PY17X_1444100 Sequence length : 384 VALUES OF COMPUTED PARAMETERS Coef20 : 3.191 CoefTot : -0.428 ChDiff : -3 ZoneTo : 8 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.524 0.976 -0.012 0.407 MesoH : -1.056 0.005 -0.597 0.129 MuHd_075 : 35.718 16.404 9.563 5.130 MuHd_095 : 26.863 12.810 6.670 5.126 MuHd_100 : 25.275 12.161 6.055 4.501 MuHd_105 : 17.747 8.659 4.075 3.105 Hmax_075 : 7.175 3.938 0.560 2.083 Hmax_095 : -1.487 1.225 -1.869 1.400 Hmax_100 : 1.400 -0.500 -2.272 1.910 Hmax_105 : -1.517 0.117 -2.252 1.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8666 0.1334 DFMC : 0.8306 0.1694
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 384 PY17X_1444100 MSKKYVYWEKQGNDRMCGLHCINSILQGPYYSEDVLAKIGKELDEKEKEFLKLSSNELIRTNSSNVLDDGFINISVLIES 80 LRRKNILLKNAFEEDLTKIISSGHQDIGYICNLEQHWFSVRKIHNTWYVLDSLKSAPLFIKDINLKCYFNDIFKKYHIFS 160 VQNMNPYISLPKPDINFEPKNPNQFYIPTNQISEISSVSNGFILEDKYNMNKSENGSLFSSFNKPQNFQWPKNGGRKLND 240 DINNISSNNIDDDGDDDFKTALRLSMEEYIKNLPPPKSEDLINEDFINVMIKLPNKKIQRKFGISKTLADIFYWIEYESV 320 NNQQIDSSLIFKNCYYLYQLFPRRKFCKYQNGSIELQVGDKVELVHDKSLKDMKFEKEETFMMQ 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1444100 3 ----MSK|KY 0.062 . PY17X_1444100 4 ---MSKK|YV 0.179 . PY17X_1444100 10 KYVYWEK|QG 0.066 . PY17X_1444100 15 EKQGNDR|MC 0.088 . PY17X_1444100 38 SEDVLAK|IG 0.059 . PY17X_1444100 41 VLAKIGK|EL 0.086 . PY17X_1444100 46 GKELDEK|EK 0.057 . PY17X_1444100 48 ELDEKEK|EF 0.056 . PY17X_1444100 52 KEKEFLK|LS 0.060 . PY17X_1444100 60 SSNELIR|TN 0.094 . PY17X_1444100 82 VLIESLR|RK 0.076 . PY17X_1444100 83 LIESLRR|KN 0.084 . PY17X_1444100 84 IESLRRK|NI 0.082 . PY17X_1444100 89 RKNILLK|NA 0.074 . PY17X_1444100 98 FEEDLTK|II 0.068 . PY17X_1444100 121 QHWFSVR|KI 0.085 . PY17X_1444100 122 HWFSVRK|IH 0.076 . PY17X_1444100 134 YVLDSLK|SA 0.068 . PY17X_1444100 141 SAPLFIK|DI 0.065 . PY17X_1444100 146 IKDINLK|CY 0.059 . PY17X_1444100 154 YFNDIFK|KY 0.059 . PY17X_1444100 155 FNDIFKK|YH 0.101 . PY17X_1444100 172 PYISLPK|PD 0.059 . PY17X_1444100 180 DINFEPK|NP 0.062 . PY17X_1444100 207 GFILEDK|YN 0.063 . PY17X_1444100 212 DKYNMNK|SE 0.080 . PY17X_1444100 224 LFSSFNK|PQ 0.062 . PY17X_1444100 232 QNFQWPK|NG 0.073 . PY17X_1444100 236 WPKNGGR|KL 0.095 . PY17X_1444100 237 PKNGGRK|LN 0.097 . PY17X_1444100 259 DGDDDFK|TA 0.054 . PY17X_1444100 263 DFKTALR|LS 0.065 . PY17X_1444100 271 SMEEYIK|NL 0.056 . PY17X_1444100 277 KNLPPPK|SE 0.079 . PY17X_1444100 292 FINVMIK|LP 0.066 . PY17X_1444100 296 MIKLPNK|KI 0.064 . PY17X_1444100 297 IKLPNKK|IQ 0.089 . PY17X_1444100 300 PNKKIQR|KF 0.114 . PY17X_1444100 301 NKKIQRK|FG 0.091 . PY17X_1444100 306 RKFGISK|TL 0.072 . PY17X_1444100 332 DSSLIFK|NC 0.061 . PY17X_1444100 343 LYQLFPR|RK 0.082 . PY17X_1444100 344 YQLFPRR|KF 0.132 . PY17X_1444100 345 QLFPRRK|FC 0.090 . PY17X_1444100 348 PRRKFCK|YQ 0.090 . PY17X_1444100 361 ELQVGDK|VE 0.054 . PY17X_1444100 368 VELVHDK|SL 0.082 . PY17X_1444100 371 VHDKSLK|DM 0.064 . PY17X_1444100 374 KSLKDMK|FE 0.073 . PY17X_1444100 377 KDMKFEK|EE 0.064 . ____________________________^_________________

  • Fasta :-

    >PY17X_1444100 ATGAGTAAAAAATATGTATATTGGGAAAAGCAGGGTAATGATCGTATGTGTGGTCTTCAC TGCATAAATAGTATCCTTCAGGGACCTTATTATAGCGAAGATGTTCTAGCAAAAATAGGA AAAGAACTTGATGAAAAAGAAAAAGAATTTTTAAAATTATCTTCTAACGAGTTAATAAGA ACAAATTCATCAAATGTTTTGGATGATGGTTTTATAAATATTTCGGTGTTGATTGAAAGT TTAAGAAGAAAAAATATTTTATTAAAAAATGCTTTTGAAGAAGATTTAACAAAAATAATA TCAAGTGGTCACCAAGATATTGGTTATATATGTAATTTAGAACAACATTGGTTTAGTGTA CGTAAAATTCATAATACTTGGTATGTATTAGATAGCTTAAAAAGTGCACCATTATTTATT AAAGATATAAATTTAAAATGTTATTTTAATGATATTTTTAAAAAATATCATATATTTTCT GTACAAAATATGAATCCATATATTTCTTTACCAAAACCTGATATAAATTTTGAACCTAAA AATCCCAATCAATTTTATATACCAACAAATCAGATTTCTGAAATTTCATCTGTGTCCAAT GGTTTTATATTGGAAGATAAATATAATATGAACAAATCAGAAAATGGTAGTCTCTTTTCA AGTTTTAATAAGCCTCAAAATTTTCAATGGCCAAAAAATGGGGGAAGAAAATTAAATGAC GATATAAATAATATTAGCTCAAATAATATAGATGATGATGGTGATGACGATTTTAAAACT GCTTTGAGATTATCAATGGAAGAATATATTAAGAATCTGCCACCTCCGAAAAGTGAAGAT TTAATTAATGAAGATTTCATAAATGTTATGATCAAATTACCAAACAAAAAAATCCAAAGA AAATTTGGCATATCAAAAACTTTAGCGGACATTTTTTATTGGATAGAATATGAATCGGTA AATAACCAGCAGATAGACTCATCACTAATTTTTAAAAACTGTTATTATCTTTATCAATTA TTTCCAAGGAGAAAGTTTTGCAAGTATCAAAACGGATCTATCGAATTACAAGTTGGCGAC AAGGTTGAATTGGTTCATGATAAAAGTTTGAAGGATATGAAATTCGAAAAAGAAGAAACA TTTATGATGCAATAA
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  • Fasta :-

    MSKKYVYWEKQGNDRMCGLHCINSILQGPYYSEDVLAKIGKELDEKEKEFLKLSSNELIR TNSSNVLDDGFINISVLIESLRRKNILLKNAFEEDLTKIISSGHQDIGYICNLEQHWFSV RKIHNTWYVLDSLKSAPLFIKDINLKCYFNDIFKKYHIFSVQNMNPYISLPKPDINFEPK NPNQFYIPTNQISEISSVSNGFILEDKYNMNKSENGSLFSSFNKPQNFQWPKNGGRKLND DINNISSNNIDDDGDDDFKTALRLSMEEYIKNLPPPKSEDLINEDFINVMIKLPNKKIQR KFGISKTLADIFYWIEYESVNNQQIDSSLIFKNCYYLYQLFPRRKFCKYQNGSIELQVGD KVELVHDKSLKDMKFEKEETFMMQ

    No Results
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No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1444100265 SALRLSMEEY0.998unspPY17X_1444100369 SVHDKSLKDM0.997unsp
PY17X_1444100


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India