PY17X_1451500 | microgamete surface protein MiGS

_IDPredictionOTHERSPmTPCS_Position
PY17X_1451500SP0.0334950.9661590.000346CS pos: 23-24. TNC-YS. Pr: 0.8283
No Results

  • Fasta :-

    >PY17X_1451500 MSQKYLVIVHCVFLLLNLFKTNCYSVQSHSNLKTNNSQCIGCMNGKTKTLRNIESKNNRI NSSFLHVREDEEDDNTFYSLKLNEKNFRWSIPLAIGSDKTVIDLVLTIANSSTAFYCYDE KKPSPDTETLGYDLSKSTDLKYVDCKDETCTEILGSNKCLILEEYFKLLNGYVLRKKSCK SKFCDYVNKMNFLNMSNPGVDKNASVCPFDNKVDSDKIKGFYFNDSFLISKEKKVTYNYF GCITENENLNINENTSGIIGLTNDYKADKKYSSILNSFISNSESKKNIFGVCLIDGGGFI SFGGYDKLALKPGVPPKKVKGPEDSDDSVDTSYRNTLLSIGDDSDGLIWVDYSESTNELY KVKVTKINVNVTDDSSEHEVNKDFILDTYDYFISLPREISAKLTEKINKICKDLNDKCKQ VENSGTFQMESEQVASFPAIEFYFNENKVVVQPQDYIINDGDKNYKILVKHAESNEKLGV PFFLSKYIIFDNEQKKLGIAQSACQTKNAFSPQDSSVKPPVVPKEPTEVVDLPAKDKGPG DVIVVPGEDKRPGEVIVPEDGEDKGFYEKNKTAILAVSGVAVSGSIIGSIFYLL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1451500.fa Sequence name : PY17X_1451500 Sequence length : 594 VALUES OF COMPUTED PARAMETERS Coef20 : 4.316 CoefTot : -1.970 ChDiff : -12 ZoneTo : 68 KR : 9 DE : 1 CleavSite : 61 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.894 1.976 0.424 0.711 MesoH : -1.009 0.017 -0.490 0.153 MuHd_075 : 19.542 16.098 6.388 5.504 MuHd_095 : 30.011 19.817 8.479 8.742 MuHd_100 : 32.518 23.950 8.704 9.306 MuHd_105 : 31.011 24.867 9.991 8.529 Hmax_075 : 6.533 6.100 -2.405 1.995 Hmax_095 : 6.212 10.237 -1.507 4.016 Hmax_100 : 4.300 12.800 4.116 3.490 Hmax_105 : 9.700 15.517 2.263 4.090 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2915 0.7085 DFMC : 0.3893 0.6107 This protein is probably imported in mitochondria. f(Ser) = 0.1176 f(Arg) = 0.0441 CMi = 0.89286 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 594 PY17X_1451500 MSQKYLVIVHCVFLLLNLFKTNCYSVQSHSNLKTNNSQCIGCMNGKTKTLRNIESKNNRINSSFLHVREDEEDDNTFYSL 80 KLNEKNFRWSIPLAIGSDKTVIDLVLTIANSSTAFYCYDEKKPSPDTETLGYDLSKSTDLKYVDCKDETCTEILGSNKCL 160 ILEEYFKLLNGYVLRKKSCKSKFCDYVNKMNFLNMSNPGVDKNASVCPFDNKVDSDKIKGFYFNDSFLISKEKKVTYNYF 240 GCITENENLNINENTSGIIGLTNDYKADKKYSSILNSFISNSESKKNIFGVCLIDGGGFISFGGYDKLALKPGVPPKKVK 320 GPEDSDDSVDTSYRNTLLSIGDDSDGLIWVDYSESTNELYKVKVTKINVNVTDDSSEHEVNKDFILDTYDYFISLPREIS 400 AKLTEKINKICKDLNDKCKQVENSGTFQMESEQVASFPAIEFYFNENKVVVQPQDYIINDGDKNYKILVKHAESNEKLGV 480 PFFLSKYIIFDNEQKKLGIAQSACQTKNAFSPQDSSVKPPVVPKEPTEVVDLPAKDKGPGDVIVVPGEDKRPGEVIVPED 560 GEDKGFYEKNKTAILAVSGVAVSGSIIGSIFYLL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1451500 4 ---MSQK|YL 0.070 . PY17X_1451500 20 LLLNLFK|TN 0.064 . PY17X_1451500 33 QSHSNLK|TN 0.059 . PY17X_1451500 46 IGCMNGK|TK 0.055 . PY17X_1451500 48 CMNGKTK|TL 0.079 . PY17X_1451500 51 GKTKTLR|NI 0.104 . PY17X_1451500 56 LRNIESK|NN 0.069 . PY17X_1451500 59 IESKNNR|IN 0.118 . PY17X_1451500 68 SSFLHVR|ED 0.103 . PY17X_1451500 81 NTFYSLK|LN 0.067 . PY17X_1451500 85 SLKLNEK|NF 0.063 . PY17X_1451500 88 LNEKNFR|WS 0.090 . PY17X_1451500 99 LAIGSDK|TV 0.082 . PY17X_1451500 121 FYCYDEK|KP 0.058 . PY17X_1451500 122 YCYDEKK|PS 0.100 . PY17X_1451500 136 LGYDLSK|ST 0.085 . PY17X_1451500 141 SKSTDLK|YV 0.112 . PY17X_1451500 146 LKYVDCK|DE 0.069 . PY17X_1451500 158 EILGSNK|CL 0.060 . PY17X_1451500 167 ILEEYFK|LL 0.058 . PY17X_1451500 175 LNGYVLR|KK 0.085 . PY17X_1451500 176 NGYVLRK|KS 0.080 . PY17X_1451500 177 GYVLRKK|SC 0.123 . PY17X_1451500 180 LRKKSCK|SK 0.094 . PY17X_1451500 182 KKSCKSK|FC 0.110 . PY17X_1451500 189 FCDYVNK|MN 0.062 . PY17X_1451500 202 SNPGVDK|NA 0.074 . PY17X_1451500 212 VCPFDNK|VD 0.067 . PY17X_1451500 217 NKVDSDK|IK 0.075 . PY17X_1451500 219 VDSDKIK|GF 0.076 . PY17X_1451500 231 DSFLISK|EK 0.056 . PY17X_1451500 233 FLISKEK|KV 0.071 . PY17X_1451500 234 LISKEKK|VT 0.135 . PY17X_1451500 266 GLTNDYK|AD 0.059 . PY17X_1451500 269 NDYKADK|KY 0.075 . PY17X_1451500 270 DYKADKK|YS 0.091 . PY17X_1451500 285 ISNSESK|KN 0.068 . PY17X_1451500 286 SNSESKK|NI 0.146 . PY17X_1451500 307 SFGGYDK|LA 0.057 . PY17X_1451500 311 YDKLALK|PG 0.052 . PY17X_1451500 317 KPGVPPK|KV 0.120 . PY17X_1451500 318 PGVPPKK|VK 0.102 . PY17X_1451500 320 VPPKKVK|GP 0.091 . PY17X_1451500 334 SVDTSYR|NT 0.076 . PY17X_1451500 361 STNELYK|VK 0.062 . PY17X_1451500 363 NELYKVK|VT 0.062 . PY17X_1451500 366 YKVKVTK|IN 0.072 . PY17X_1451500 382 SEHEVNK|DF 0.070 . PY17X_1451500 397 YFISLPR|EI 0.107 . PY17X_1451500 402 PREISAK|LT 0.085 . PY17X_1451500 406 SAKLTEK|IN 0.060 . PY17X_1451500 409 LTEKINK|IC 0.061 . PY17X_1451500 412 KINKICK|DL 0.087 . PY17X_1451500 417 CKDLNDK|CK 0.058 . PY17X_1451500 419 DLNDKCK|QV 0.118 . PY17X_1451500 448 FYFNENK|VV 0.064 . PY17X_1451500 463 IINDGDK|NY 0.061 . PY17X_1451500 466 DGDKNYK|IL 0.058 . PY17X_1451500 470 NYKILVK|HA 0.074 . PY17X_1451500 477 HAESNEK|LG 0.055 . PY17X_1451500 486 VPFFLSK|YI 0.067 . PY17X_1451500 495 IFDNEQK|KL 0.069 . PY17X_1451500 496 FDNEQKK|LG 0.097 . PY17X_1451500 507 QSACQTK|NA 0.082 . PY17X_1451500 518 PQDSSVK|PP 0.053 . PY17X_1451500 524 KPPVVPK|EP 0.071 . PY17X_1451500 535 VVDLPAK|DK 0.078 . PY17X_1451500 537 DLPAKDK|GP 0.080 . PY17X_1451500 550 VVPGEDK|RP 0.058 . PY17X_1451500 551 VPGEDKR|PG 0.161 . PY17X_1451500 564 PEDGEDK|GF 0.064 . PY17X_1451500 569 DKGFYEK|NK 0.065 . PY17X_1451500 571 GFYEKNK|TA 0.077 . ____________________________^_________________

  • Fasta :-

    >PY17X_1451500 ATGTCTCAAAAATATTTAGTAATCGTCCATTGCGTTTTCCTTCTTTTGAACTTATTCAAA ACAAATTGCTATTCCGTACAATCTCACAGCAATTTGAAAACAAATAATTCTCAATGTATT GGCTGTATGAATGGAAAAACTAAAACATTAAGAAACATCGAAAGTAAAAATAATAGAATC AATAGTTCTTTCTTACATGTACGAGAAGATGAAGAAGATGATAATACATTTTATAGTCTC AAATTAAATGAAAAAAATTTTAGATGGAGCATACCATTAGCAATAGGTTCAGATAAGACT GTTATTGATTTAGTTTTAACTATTGCAAATTCTTCTACTGCATTTTATTGCTATGATGAA AAGAAACCCTCTCCAGATACAGAAACATTAGGATATGATTTATCGAAATCTACAGATTTG AAATATGTTGATTGTAAAGATGAAACATGTACTGAAATTTTAGGAAGTAATAAGTGTTTA ATTTTAGAAGAATATTTTAAATTATTAAATGGATATGTTTTGAGAAAAAAAAGTTGTAAA AGCAAATTTTGTGATTATGTAAATAAAATGAATTTTTTAAATATGAGTAATCCAGGTGTA GATAAAAATGCATCTGTATGTCCATTTGATAATAAAGTTGATAGTGATAAAATTAAAGGG TTCTATTTTAATGATTCCTTTTTAATTAGTAAGGAAAAAAAAGTTACATATAATTATTTT GGATGTATAACAGAAAATGAAAATTTAAATATTAATGAAAATACATCTGGTATTATTGGA TTAACTAATGATTATAAAGCTGATAAGAAATATTCATCTATTTTAAATTCTTTTATTTCA AATTCCGAATCAAAAAAAAATATATTTGGTGTATGCTTAATTGATGGGGGTGGGTTTATT TCATTTGGAGGATATGACAAATTAGCATTAAAACCTGGTGTGCCTCCAAAAAAAGTAAAA GGCCCAGAAGATAGTGATGATTCTGTAGACACATCTTATAGAAACACATTATTATCTATT GGAGATGATTCAGATGGTTTAATTTGGGTAGACTATTCCGAATCTACAAATGAATTATAC AAAGTAAAAGTGACAAAAATAAATGTGAACGTAACTGATGATAGCTCAGAACATGAAGTT AACAAAGATTTTATCCTTGATACATATGACTACTTTATATCGCTACCCAGAGAAATTTCA GCTAAACTTACAGAAAAAATTAATAAAATATGTAAAGATTTAAATGACAAATGTAAACAA GTTGAAAATTCTGGAACATTCCAAATGGAAAGTGAGCAAGTAGCATCTTTCCCAGCCATA GAATTTTATTTCAATGAAAACAAAGTGGTGGTCCAACCCCAAGATTATATAATAAATGAC GGAGATAAAAATTACAAAATTTTAGTAAAACATGCTGAAAGCAATGAAAAACTTGGAGTC CCATTTTTCTTGAGCAAATATATAATATTTGACAACGAACAAAAGAAATTAGGTATTGCC CAATCTGCATGCCAAACTAAAAACGCATTCTCACCACAAGATTCTTCTGTCAAACCACCA GTAGTACCTAAAGAACCAACCGAAGTTGTTGATCTCCCAGCCAAAGATAAAGGGCCAGGT GATGTCATTGTAGTTCCAGGTGAAGATAAAAGACCAGGCGAAGTTATAGTACCAGAGGAC GGTGAAGATAAAGGTTTTTACGAAAAAAATAAAACAGCCATTTTAGCAGTCTCTGGTGTT GCTGTTTCAGGATCTATTATTGGAAGTATTTTTTACCTTTTATAA
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  • Fasta :-

    MSQKYLVIVHCVFLLLNLFKTNCYSVQSHSNLKTNNSQCIGCMNGKTKTLRNIESKNNRI NSSFLHVREDEEDDNTFYSLKLNEKNFRWSIPLAIGSDKTVIDLVLTIANSSTAFYCYDE KKPSPDTETLGYDLSKSTDLKYVDCKDETCTEILGSNKCLILEEYFKLLNGYVLRKKSCK SKFCDYVNKMNFLNMSNPGVDKNASVCPFDNKVDSDKIKGFYFNDSFLISKEKKVTYNYF GCITENENLNINENTSGIIGLTNDYKADKKYSSILNSFISNSESKKNIFGVCLIDGGGFI SFGGYDKLALKPGVPPKKVKGPEDSDDSVDTSYRNTLLSIGDDSDGLIWVDYSESTNELY KVKVTKINVNVTDDSSEHEVNKDFILDTYDYFISLPREISAKLTEKINKICKDLNDKCKQ VENSGTFQMESEQVASFPAIEFYFNENKVVVQPQDYIINDGDKNYKILVKHAESNEKLGV PFFLSKYIIFDNEQKKLGIAQSACQTKNAFSPQDSSVKPPVVPKEPTEVVDLPAKDKGPG DVIVVPGEDKRPGEVIVPEDGEDKGFYEKNKTAILAVSGVAVSGSIIGSIFYLL

  • title: Active site flap
  • coordinates: D210,N211,K212,V213,K217,I218,K219,G220
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1451500339 SNTLLSIGDD0.994unspPY17X_1451500339 SNTLLSIGDD0.994unspPY17X_1451500339 SNTLLSIGDD0.994unspPY17X_1451500511 SKNAFSPQDS0.997unspPY17X_1451500284 SSNSESKKNI0.994unspPY17X_1451500332 SSVDTSYRNT0.995unsp
PY17X_1451500


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India