Warning : mysqli_connect(): (HY000/1045): Access denied for user 'root'@'localhost' (using password: YES) in /opt/lampp/htdocs/ProtPathDB/database/db_connect.php on line 2
Failed to connect to MySQL: Access denied for user 'root'@'localhost' (using password: YES)
ProtPathDB
Targetp
Signalp
Mitoprot
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1464400.fa
Sequence name : PY17X_1464400
Sequence length : 422
VALUES OF COMPUTED PARAMETERS
Coef20 : 3.603
CoefTot : 0.282
ChDiff : -2
ZoneTo : 4
KR : 0
DE : 0
CleavSite : 0
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 0.335 0.788 -0.063 0.398
MesoH : -0.765 0.175 -0.411 0.158
MuHd_075 : 19.383 5.818 2.517 2.436
MuHd_095 : 4.726 3.874 1.552 0.254
MuHd_100 : 16.178 6.007 4.743 1.627
MuHd_105 : 27.247 10.463 7.573 3.535
Hmax_075 : 2.012 3.600 -2.592 1.300
Hmax_095 : 2.975 3.063 -1.527 1.514
Hmax_100 : 12.200 7.400 1.251 3.230
Hmax_105 : 12.367 6.533 1.148 3.045
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.9479 0.0521
DFMC : 0.8833 0.1167
##### ProP v.1.0b ProPeptide Cleavage Site Prediction #####
##### Furin-type cleavage site prediction (Arginine/Lysine residues) #####
422 PY17X_1464400
MAAVDMQMRSSNLGEGTKNENDKSNGNKNDEETQSGIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELRDEI 80
QYLLEAASYVGEIAKPMGKNKVLVKINPEGKYVVDIASHIDIAKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKV 160
PDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY 240
IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDDA 320
LLRPGRIDRKIEFPNPNVEARIEILKIHSRKMNLMRGIDMVKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 400
MAVAKVMKQDAEKNFTLRKLWK 480
................................................................................ 80
................................................................................ 160
................................................................................ 240
................................................................................ 320
................................................................................ 400
...................... 480
Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0
Name Pos Context Score Pred
____________________________v_________________
PY17X_1464400 9 AVDMQMR|SS 0.146 .
PY17X_1464400 18 NLGEGTK|NE 0.057 .
PY17X_1464400 23 TKNENDK|SN 0.139 .
PY17X_1464400 28 DKSNGNK|ND 0.080 .
PY17X_1464400 38 ETQSGIK|TY 0.054 .
PY17X_1464400 44 KTYYEMK|IE 0.059 .
PY17X_1464400 54 YESIINK|KL 0.064 .
PY17X_1464400 55 ESIINKK|LQ 0.096 .
PY17X_1464400 59 NKKLQNK|KR 0.061 .
PY17X_1464400 60 KKLQNKK|RL 0.114 .
PY17X_1464400 61 KLQNKKR|LE 0.171 .
PY17X_1464400 66 KRLEAQR|NE 0.074 .
PY17X_1464400 72 RNELNTR|VR 0.071 .
PY17X_1464400 74 ELNTRVR|EL 0.111 .
PY17X_1464400 77 TRVRELR|DE 0.409 .
PY17X_1464400 95 YVGEIAK|PM 0.070 .
PY17X_1464400 99 IAKPMGK|NK 0.054 .
PY17X_1464400 101 KPMGKNK|VL 0.077 .
PY17X_1464400 105 KNKVLVK|IN 0.064 .
PY17X_1464400 111 KINPEGK|YV 0.096 .
PY17X_1464400 124 SHIDIAK|CT 0.065 .
PY17X_1464400 130 KCTPNTR|VA 0.068 .
PY17X_1464400 139 LYNDSYK|LH 0.058 .
PY17X_1464400 142 DSYKLHK|IL 0.062 .
PY17X_1464400 147 HKILPSK|VD 0.057 .
PY17X_1464400 156 PLVSLMK|VE 0.054 .
PY17X_1464400 159 SLMKVEK|VP 0.064 .
PY17X_1464400 176 GLDQQVK|EV 0.083 .
PY17X_1464400 179 QQVKEVK|EV 0.072 .
PY17X_1464400 187 VIELPVK|HP 0.060 .
PY17X_1464400 201 LGISQPK|GV 0.082 .
PY17X_1464400 213 GPPGTGK|TL 0.059 .
PY17X_1464400 218 GKTLLAR|AV 0.134 .
PY17X_1464400 230 TDCTFIR|VS 0.131 .
PY17X_1464400 239 GSELVQK|YI 0.105 .
PY17X_1464400 246 YIGEGSR|MV 0.115 .
PY17X_1464400 249 EGSRMVR|EL 0.260 .
PY17X_1464400 256 ELFVMAR|EH 0.090 .
PY17X_1464400 275 DSIGSQR|IE 0.114 .
PY17X_1464400 287 GDSEVQR|TM 0.152 .
PY17X_1464400 306 ESTQNIK|VI 0.055 .
PY17X_1464400 313 VIMCTNR|ID 0.071 .
PY17X_1464400 323 LDDALLR|PG 0.069 .
PY17X_1464400 326 ALLRPGR|ID 0.223 .
PY17X_1464400 329 RPGRIDR|KI 0.277 .
PY17X_1464400 330 PGRIDRK|IE 0.075 .
PY17X_1464400 341 NPNVEAR|IE 0.127 .
PY17X_1464400 346 ARIEILK|IH 0.067 .
PY17X_1464400 350 ILKIHSR|KM 0.079 .
PY17X_1464400 351 LKIHSRK|MN 0.092 .
PY17X_1464400 356 RKMNLMR|GI 0.152 .
PY17X_1464400 362 RGIDMVK|IA 0.068 .
PY17X_1464400 376 CSGAEVK|AV 0.103 .
PY17X_1464400 388 AGMFALR|ER 0.080 .
PY17X_1464400 390 MFALRER|RV 0.129 .
PY17X_1464400 391 FALRERR|VH 0.353 .
PY17X_1464400 405 FEMAVAK|VM 0.065 .
PY17X_1464400 408 AVAKVMK|QD 0.074 .
PY17X_1464400 413 MKQDAEK|NF 0.058 .
PY17X_1464400 418 EKNFTLR|KL 0.106 .
PY17X_1464400 419 KNFTLRK|LW 0.077 .
PY17X_1464400 422 TLRKLWK|-- 0.080 .
____________________________^_________________
Nucleotide sequence
Protein sequence
N_Linked Glycosylation
O_Linked Glycosylation
Phosphorylation