PY17X_1464400 | 26S protease regulatory subunit 8, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1464400OTHER0.9996460.0000540.000299
No Results

  • Fasta :-

    >PY17X_1464400 MAAVDMQMRSSNLGEGTKNENDKSNGNKNDEETQSGIKTYYEMKIEEYESIINKKLQNKK RLEAQRNELNTRVRELRDEIQYLLEAASYVGEIAKPMGKNKVLVKINPEGKYVVDIASHI DIAKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKE VIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFE STQNIKVIMCTNRIDILDDALLRPGRIDRKIEFPNPNVEARIEILKIHSRKMNLMRGIDM VKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQDAEKNFTLRKL WK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1464400.fa Sequence name : PY17X_1464400 Sequence length : 422 VALUES OF COMPUTED PARAMETERS Coef20 : 3.603 CoefTot : 0.282 ChDiff : -2 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.335 0.788 -0.063 0.398 MesoH : -0.765 0.175 -0.411 0.158 MuHd_075 : 19.383 5.818 2.517 2.436 MuHd_095 : 4.726 3.874 1.552 0.254 MuHd_100 : 16.178 6.007 4.743 1.627 MuHd_105 : 27.247 10.463 7.573 3.535 Hmax_075 : 2.012 3.600 -2.592 1.300 Hmax_095 : 2.975 3.063 -1.527 1.514 Hmax_100 : 12.200 7.400 1.251 3.230 Hmax_105 : 12.367 6.533 1.148 3.045 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9479 0.0521 DFMC : 0.8833 0.1167
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 422 PY17X_1464400 MAAVDMQMRSSNLGEGTKNENDKSNGNKNDEETQSGIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELRDEI 80 QYLLEAASYVGEIAKPMGKNKVLVKINPEGKYVVDIASHIDIAKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKV 160 PDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY 240 IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDDA 320 LLRPGRIDRKIEFPNPNVEARIEILKIHSRKMNLMRGIDMVKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFE 400 MAVAKVMKQDAEKNFTLRKLWK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1464400 9 AVDMQMR|SS 0.146 . PY17X_1464400 18 NLGEGTK|NE 0.057 . PY17X_1464400 23 TKNENDK|SN 0.139 . PY17X_1464400 28 DKSNGNK|ND 0.080 . PY17X_1464400 38 ETQSGIK|TY 0.054 . PY17X_1464400 44 KTYYEMK|IE 0.059 . PY17X_1464400 54 YESIINK|KL 0.064 . PY17X_1464400 55 ESIINKK|LQ 0.096 . PY17X_1464400 59 NKKLQNK|KR 0.061 . PY17X_1464400 60 KKLQNKK|RL 0.114 . PY17X_1464400 61 KLQNKKR|LE 0.171 . PY17X_1464400 66 KRLEAQR|NE 0.074 . PY17X_1464400 72 RNELNTR|VR 0.071 . PY17X_1464400 74 ELNTRVR|EL 0.111 . PY17X_1464400 77 TRVRELR|DE 0.409 . PY17X_1464400 95 YVGEIAK|PM 0.070 . PY17X_1464400 99 IAKPMGK|NK 0.054 . PY17X_1464400 101 KPMGKNK|VL 0.077 . PY17X_1464400 105 KNKVLVK|IN 0.064 . PY17X_1464400 111 KINPEGK|YV 0.096 . PY17X_1464400 124 SHIDIAK|CT 0.065 . PY17X_1464400 130 KCTPNTR|VA 0.068 . PY17X_1464400 139 LYNDSYK|LH 0.058 . PY17X_1464400 142 DSYKLHK|IL 0.062 . PY17X_1464400 147 HKILPSK|VD 0.057 . PY17X_1464400 156 PLVSLMK|VE 0.054 . PY17X_1464400 159 SLMKVEK|VP 0.064 . PY17X_1464400 176 GLDQQVK|EV 0.083 . PY17X_1464400 179 QQVKEVK|EV 0.072 . PY17X_1464400 187 VIELPVK|HP 0.060 . PY17X_1464400 201 LGISQPK|GV 0.082 . PY17X_1464400 213 GPPGTGK|TL 0.059 . PY17X_1464400 218 GKTLLAR|AV 0.134 . PY17X_1464400 230 TDCTFIR|VS 0.131 . PY17X_1464400 239 GSELVQK|YI 0.105 . PY17X_1464400 246 YIGEGSR|MV 0.115 . PY17X_1464400 249 EGSRMVR|EL 0.260 . PY17X_1464400 256 ELFVMAR|EH 0.090 . PY17X_1464400 275 DSIGSQR|IE 0.114 . PY17X_1464400 287 GDSEVQR|TM 0.152 . PY17X_1464400 306 ESTQNIK|VI 0.055 . PY17X_1464400 313 VIMCTNR|ID 0.071 . PY17X_1464400 323 LDDALLR|PG 0.069 . PY17X_1464400 326 ALLRPGR|ID 0.223 . PY17X_1464400 329 RPGRIDR|KI 0.277 . PY17X_1464400 330 PGRIDRK|IE 0.075 . PY17X_1464400 341 NPNVEAR|IE 0.127 . PY17X_1464400 346 ARIEILK|IH 0.067 . PY17X_1464400 350 ILKIHSR|KM 0.079 . PY17X_1464400 351 LKIHSRK|MN 0.092 . PY17X_1464400 356 RKMNLMR|GI 0.152 . PY17X_1464400 362 RGIDMVK|IA 0.068 . PY17X_1464400 376 CSGAEVK|AV 0.103 . PY17X_1464400 388 AGMFALR|ER 0.080 . PY17X_1464400 390 MFALRER|RV 0.129 . PY17X_1464400 391 FALRERR|VH 0.353 . PY17X_1464400 405 FEMAVAK|VM 0.065 . PY17X_1464400 408 AVAKVMK|QD 0.074 . PY17X_1464400 413 MKQDAEK|NF 0.058 . PY17X_1464400 418 EKNFTLR|KL 0.106 . PY17X_1464400 419 KNFTLRK|LW 0.077 . PY17X_1464400 422 TLRKLWK|-- 0.080 . ____________________________^_________________

  • Fasta :-

    >PY17X_1464400 ATGGCAGCAGTTGATATGCAAATGAGATCAAGTAATTTAGGAGAAGGAACAAAAAATGAA AATGATAAAAGTAATGGAAATAAAAATGATGAAGAAACACAATCAGGTATCAAAACTTAT TATGAAATGAAAATAGAAGAATATGAATCAATTATAAATAAAAAATTACAAAATAAAAAA AGATTAGAAGCTCAAAGAAATGAATTAAATACAAGAGTTAGAGAATTAAGAGATGAAATT CAATATTTATTAGAAGCTGCATCATATGTTGGTGAAATAGCTAAACCAATGGGAAAAAAT AAAGTACTTGTTAAAATAAATCCAGAAGGTAAATATGTAGTAGATATAGCTAGCCATATA GATATAGCTAAATGTACACCAAATACAAGAGTAGCTTTATATAATGATTCATATAAGTTA CATAAAATATTACCAAGTAAGGTTGATCCACTTGTTTCATTAATGAAAGTTGAAAAAGTA CCTGACTCAACATATGAAATGGTTGGAGGATTAGATCAACAAGTTAAAGAAGTTAAAGAA GTTATTGAATTACCAGTTAAACATCCAGAAATATTTGAATCGTTAGGTATATCTCAACCT AAAGGTGTATTATTATATGGTCCACCAGGTACAGGCAAAACTTTATTAGCACGTGCTGTA GCACATCATACAGATTGTACATTTATTAGAGTTTCGGGTTCTGAACTTGTTCAGAAATAT ATTGGAGAAGGATCTCGTATGGTTAGAGAATTATTTGTTATGGCTAGAGAACATGCACCA TCTATTATTTTTATGGATGAAATTGATTCTATTGGAAGTCAAAGAATAGAAGGTGAACAT GGAGATTCAGAAGTTCAAAGAACCATGATGGAATTATTAAATCAACTAGATGGATTTGAG TCGACACAAAATATTAAAGTTATTATGTGCACTAACAGAATTGATATATTAGATGATGCA TTATTAAGACCAGGACGGATCGATAGGAAAATCGAATTTCCAAATCCAAATGTAGAAGCA CGTATTGAAATTCTCAAAATTCATAGTAGAAAAATGAATTTAATGAGAGGTATTGATATG GTAAAAATTGCTACTGATATGAATAATTGTTCAGGAGCCGAAGTTAAAGCTGTTTGTACT GAAGCAGGTATGTTTGCATTAAGAGAAAGACGGGTTCATGTTACTCAGGAAGATTTTGAA ATGGCTGTTGCTAAAGTTATGAAACAAGATGCAGAGAAAAATTTTACCTTACGAAAATTA TGGAAATAA
  • Download Fasta

  • Fasta :-

    MAAVDMQMRSSNLGEGTKNENDKSNGNKNDEETQSGIKTYYEMKIEEYESIINKKLQNKK RLEAQRNELNTRVRELRDEIQYLLEAASYVGEIAKPMGKNKVLVKINPEGKYVVDIASHI DIAKCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKE VIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFE STQNIKVIMCTNRIDILDDALLRPGRIDRKIEFPNPNVEARIEILKIHSRKMNLMRGIDM VKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQDAEKNFTLRKL WK

  • title: ATP binding site
  • coordinates: P208,P209,G210,T211,G212,K213,T214,L215,D266,N312
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1464400163 SKVPDSTYEM0.996unspPY17X_1464400232 SFIRVSGSEL0.996unsp
PY17X_1464400


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India