PcyM_0106400 | cysteine-rich secretory protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0106400SP0.0062940.9933520.000354CS pos: 26-27. CKA-AT. Pr: 0.6538
No Results

  • Fasta :-

    >PcyM_0106400 MVDRRLHCLFALLCFLTLSRISSCKAATGGFCSFNNDFIRERHNDLRLKHNADPLRWSTQ LEKAASAEAKLIKEISNCTVMVNQMNTNYFTISPNSKIETAVDTWYEGINNYDFELGPIR RGDDTVFEFTRVVWNSAEHIGCSSACCGNRGVLICKYDSHTNQPGHFADNVGTLDPMFVW ENFTFEPEQRRPDSEPSQNGLPPSPIS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0106400.fa Sequence name : PcyM_0106400 Sequence length : 207 VALUES OF COMPUTED PARAMETERS Coef20 : 5.098 CoefTot : 0.650 ChDiff : -5 ZoneTo : 36 KR : 4 DE : 1 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.341 1.812 0.437 0.488 MesoH : -1.017 -0.059 -0.474 0.089 MuHd_075 : 26.489 14.293 8.089 5.175 MuHd_095 : 29.074 13.656 5.772 6.692 MuHd_100 : 19.006 13.278 3.655 4.313 MuHd_105 : 14.990 15.711 4.904 4.927 Hmax_075 : 14.700 13.738 4.222 4.375 Hmax_095 : 18.550 21.262 4.990 6.335 Hmax_100 : 14.100 21.500 3.508 6.650 Hmax_105 : 8.300 27.067 5.781 5.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6908 0.3092 DFMC : 0.8341 0.1659
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 207 PcyM_0106400 MVDRRLHCLFALLCFLTLSRISSCKAATGGFCSFNNDFIRERHNDLRLKHNADPLRWSTQLEKAASAEAKLIKEISNCTV 80 MVNQMNTNYFTISPNSKIETAVDTWYEGINNYDFELGPIRRGDDTVFEFTRVVWNSAEHIGCSSACCGNRGVLICKYDSH 160 TNQPGHFADNVGTLDPMFVWENFTFEPEQRRPDSEPSQNGLPPSPIS 240 ................................................................................ 80 ................................................................................ 160 ............................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0106400 4 ---MVDR|RL 0.087 . PcyM_0106400 5 --MVDRR|LH 0.086 . PcyM_0106400 20 CFLTLSR|IS 0.071 . PcyM_0106400 25 SRISSCK|AA 0.108 . PcyM_0106400 40 FNNDFIR|ER 0.095 . PcyM_0106400 42 NDFIRER|HN 0.085 . PcyM_0106400 47 ERHNDLR|LK 0.096 . PcyM_0106400 49 HNDLRLK|HN 0.068 . PcyM_0106400 56 HNADPLR|WS 0.125 . PcyM_0106400 63 WSTQLEK|AA 0.070 . PcyM_0106400 70 AASAEAK|LI 0.087 . PcyM_0106400 73 AEAKLIK|EI 0.082 . PcyM_0106400 97 TISPNSK|IE 0.074 . PcyM_0106400 120 FELGPIR|RG 0.073 . PcyM_0106400 121 ELGPIRR|GD 0.182 . PcyM_0106400 131 TVFEFTR|VV 0.113 . PcyM_0106400 150 SACCGNR|GV 0.115 . PcyM_0106400 156 RGVLICK|YD 0.065 . PcyM_0106400 190 TFEPEQR|RP 0.085 . PcyM_0106400 191 FEPEQRR|PD 0.092 . ____________________________^_________________

  • Fasta :-

    >PcyM_0106400 ATGGTGGACAGACGCCTGCATTGCCTTTTTGCCCTACTTTGCTTCTTAACCCTTTCGCGA ATCTCCTCGTGTAAAGCAGCGACTGGAGGTTTTTGCTCGTTTAACAATGACTTCATTCGA GAAAGACACAATGATTTGCGGTTGAAGCATAACGCCGATCCGTTGCGCTGGAGCACACAG CTGGAAAAGGCGGCAAGCGCTGAAGCCAAACTGATAAAGGAGATCTCCAATTGCACTGTC ATGGTGAACCAAATGAATACAAATTATTTTACCATTTCGCCCAACAGCAAAATTGAAACA GCCGTCGATACATGGTATGAAGGCATTAACAACTATGACTTTGAGTTAGGGCCCATCCGC CGGGGGGATGACACCGTTTTTGAATTCACCAGGGTTGTATGGAACAGCGCCGAGCACATC GGGTGCTCCAGTGCCTGCTGCGGTAACAGGGGGGTTTTAATTTGTAAATATGACAGCCAC ACCAATCAGCCAGGTCATTTCGCCGATAACGTTGGGACGCTTGACCCAATGTTCGTTTGG GAAAACTTCACATTCGAGCCGGAACAAAGACGACCAGACAGTGAGCCAAGTCAGAATGGT CTCCCCCCTTCGCCCATTTCATAA
  • Download Fasta

  • Fasta :-

    MVDRRLHCLFALLCFLTLSRISSCKAATGGFCSFNNDFIRERHNDLRLKHNADPLRWSTQ LEKAASAEAKLIKEISNCTVMVNQMNTNYFTISPNSKIETAVDTWYEGINNYDFELGPIR RGDDTVFEFTRVVWNSAEHIGCSSACCGNRGVLICKYDSHTNQPGHFADNVGTLDPMFVW ENFTFEPEQRRPDSEPSQNGLPPSPIS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_010640022 SLSRISSCKA0.991unspPcyM_010640096 SISPNSKIET0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India