PcyM_0117400 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0117400OTHER0.9995640.0004070.000029
No Results

  • Fasta :-

    >PcyM_0117400 MGNTLNRFIFNNPVEGCYEKFRLDFIFVETECGDRIAAHFINRKAPLTILFCHGNGENIY MLYDYFCEASKIWNVNVFLYDYPGYGESTGTPNEMSMYQSGRAVYDYMVNVLNIKAESIV LYGKSIGSCAAIDIAIVRKVKGIILQSALMSLLNICFKTRFILPFDSFCNIKKIGMVPCF AFFIHGTDDKIVPFYHGLSLYEKCKLKVHPYWVVGGKHNDIELIENKKFNDSIKSFLKFL RNV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0117400.fa Sequence name : PcyM_0117400 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 3.318 CoefTot : -0.782 ChDiff : 4 ZoneTo : 14 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.553 0.131 0.515 MesoH : 0.073 1.043 -0.120 0.355 MuHd_075 : 26.928 21.102 7.256 6.738 MuHd_095 : 34.693 20.646 10.282 7.124 MuHd_100 : 22.274 11.362 6.373 5.053 MuHd_105 : 7.346 2.565 1.551 3.077 Hmax_075 : 14.817 15.983 2.652 5.845 Hmax_095 : 10.400 10.763 1.985 4.296 Hmax_100 : 10.200 8.700 1.281 4.520 Hmax_105 : 1.000 5.600 -1.063 3.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8375 0.1625 DFMC : 0.8787 0.1213
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 PcyM_0117400 MGNTLNRFIFNNPVEGCYEKFRLDFIFVETECGDRIAAHFINRKAPLTILFCHGNGENIYMLYDYFCEASKIWNVNVFLY 80 DYPGYGESTGTPNEMSMYQSGRAVYDYMVNVLNIKAESIVLYGKSIGSCAAIDIAIVRKVKGIILQSALMSLLNICFKTR 160 FILPFDSFCNIKKIGMVPCFAFFIHGTDDKIVPFYHGLSLYEKCKLKVHPYWVVGGKHNDIELIENKKFNDSIKSFLKFL 240 RNV 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0117400 7 MGNTLNR|FI 0.112 . PcyM_0117400 20 VEGCYEK|FR 0.060 . PcyM_0117400 22 GCYEKFR|LD 0.099 . PcyM_0117400 35 ETECGDR|IA 0.071 . PcyM_0117400 43 AAHFINR|KA 0.082 . PcyM_0117400 44 AHFINRK|AP 0.079 . PcyM_0117400 71 YFCEASK|IW 0.056 . PcyM_0117400 102 SMYQSGR|AV 0.187 . PcyM_0117400 115 VNVLNIK|AE 0.065 . PcyM_0117400 124 SIVLYGK|SI 0.082 . PcyM_0117400 138 IDIAIVR|KV 0.124 . PcyM_0117400 139 DIAIVRK|VK 0.110 . PcyM_0117400 141 AIVRKVK|GI 0.128 . PcyM_0117400 158 LLNICFK|TR 0.063 . PcyM_0117400 160 NICFKTR|FI 0.096 . PcyM_0117400 172 DSFCNIK|KI 0.072 . PcyM_0117400 173 SFCNIKK|IG 0.080 . PcyM_0117400 190 IHGTDDK|IV 0.065 . PcyM_0117400 203 GLSLYEK|CK 0.069 . PcyM_0117400 205 SLYEKCK|LK 0.060 . PcyM_0117400 207 YEKCKLK|VH 0.056 . PcyM_0117400 217 YWVVGGK|HN 0.070 . PcyM_0117400 227 IELIENK|KF 0.066 . PcyM_0117400 228 ELIENKK|FN 0.094 . PcyM_0117400 234 KFNDSIK|SF 0.099 . PcyM_0117400 238 SIKSFLK|FL 0.075 . PcyM_0117400 241 SFLKFLR|NV 0.127 . ____________________________^_________________

  • Fasta :-

    >PcyM_0117400 ATGGGGAACACCCTGAATCGGTTTATTTTTAATAACCCCGTCGAGGGGTGCTACGAAAAA TTCCGCTTGGACTTTATTTTTGTTGAAACGGAGTGCGGGGACAGAATTGCGGCCCACTTC ATCAATAGGAAAGCCCCACTAACCATTTTGTTCTGCCATGGCAATGGTGAGAACATCTAC ATGTTGTATGATTACTTTTGCGAGGCGTCCAAAATATGGAATGTGAACGTGTTCTTGTAC GATTACCCCGGATACGGAGAGAGCACCGGAACGCCCAACGAAATGAGTATGTACCAAAGT GGAAGAGCGGTGTATGACTACATGGTGAACGTCTTAAACATAAAGGCAGAGAGCATTGTG TTGTACGGGAAGTCCATAGGTTCGTGCGCTGCGATCGACATAGCCATCGTGAGGAAGGTA AAAGGAATAATTCTGCAGAGCGCCCTAATGTCCCTCCTGAACATTTGCTTTAAAACGCGG TTTATCCTGCCGTTCGATTCTTTCTGCAACATAAAGAAGATCGGCATGGTTCCCTGCTTC GCCTTTTTCATCCATGGCACTGACGACAAGATAGTCCCCTTTTATCACGGACTGAGCCTC TATGAAAAGTGCAAACTGAAAGTGCATCCCTACTGGGTTGTCGGCGGCAAGCACAATGAC ATCGAGTTGATTGAGAACAAGAAGTTCAACGACAGCATAAAGTCTTTTTTGAAGTTTCTG CGTAATGTGTAG
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  • Fasta :-

    MGNTLNRFIFNNPVEGCYEKFRLDFIFVETECGDRIAAHFINRKAPLTILFCHGNGENIY MLYDYFCEASKIWNVNVFLYDYPGYGESTGTPNEMSMYQSGRAVYDYMVNVLNIKAESIV LYGKSIGSCAAIDIAIVRKVKGIILQSALMSLLNICFKTRFILPFDSFCNIKKIGMVPCF AFFIHGTDDKIVPFYHGLSLYEKCKLKVHPYWVVGGKHNDIELIENKKFNDSIKSFLKFL RNV

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India