PcyM_0416600 | serine-repeat antigen 5 (SERA)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0416600SP0.1108750.8891210.000005CS pos: 22-23. SES-SS. Pr: 0.4034
No Results

  • Fasta :-

    >PcyM_0416600 MKSRWCALLILLKCTPGEISESSSGLGSGPDGVQSSGPTSGVSDDSSKSPQQNAEQTIPG NGSSTGTTVSSPSGQPSGGGGTDPQAGSGSAGETHNATQVPGTQIPAIPENAQDQSIEET ITSNGGQNGDNVVSTVQNPEQANPQADSATQVAAPPPAITTNPIEVKSSLLKDQKGLKIT GPCKSFFQVYLVPYLYMNVNAERSEIEMEPLFMKVDNRIKFEKEKHLLQNICAENKSFKL VLYIYEGELTIKWKVYPPKGESTNDKTVDIRKYKMKDIGQPITSMQVMVMTEKHKTIYVE SKNFSVMNDIPEKCDAIANECFMSGVLDIQKCYHCTLLLQKKDSAQECFNFVSPEIRSRF DDIQAKGEDEENPNEVELEGAIDKIFIKIYKKGENHYKEVDQLAIMDSSFKSELLKYCSL MKETDSSGALDNHELGNAEEVFAHITTMLQSNSDLNVYSLKNKLKNPAICLKKVGHWIGS KTGLVLPILEHSSVHDSANTYVETEGSTSNSATTQSADVHLLHVSDKLFCNADYCDWTKD TSSCIAKIEAQDQGDCATSWLFASKVHLETIKCVKGYEHVPSSALYVANCSSKEAKDKCQ AASNPLEFLNILEETKFLPAESDLPYSYKAVNNVCPEPKSHWQNLWENVKLLDKQYQPNS VSTKGYTAYQSDHFKGNMDAFNKLVKSEVMNKGSAIAYVKAQGVMSYDLNGKKVLSLCGG ETPDLAVNIVGYGNYINGEGVKKSYWLLQNSWGKHWGDKGKFKVDMHGPAHCQQNFIHTA AVFNVDIPVIVPAPNSDPEINNYYLKKSPDFFSNFYFNKLEAESDGNSGGAKNASNNLTV QGQEEPPVVPTEAQASHSGGSGSGQSAGGSANGQVQPGPGTPVPEGSAVGSSPLQTVPST SLPTNPDASAAPVQQNGGADQQVSPTLPGTPNSLATTGTTGQAPEQPTVQPTPQTVQVPS AQPARAPLSTLTGSTGVIVTEVKEALHFLKNVKNGKVKSNFVSYDNADALGDEKVCSRAF STDVDKQAECIEFCEKNWDACKDKVSPGYCLTKKRGSNDCFFCFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0416600.fa Sequence name : PcyM_0416600 Sequence length : 1065 VALUES OF COMPUTED PARAMETERS Coef20 : 4.381 CoefTot : 0.147 ChDiff : -28 ZoneTo : 17 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.041 1.494 0.088 0.609 MesoH : -0.071 -0.008 -0.309 0.173 MuHd_075 : 28.610 11.749 7.341 4.886 MuHd_095 : 6.087 3.081 3.027 1.051 MuHd_100 : 4.870 3.063 2.900 1.272 MuHd_105 : 2.512 2.990 3.154 1.185 Hmax_075 : 16.800 12.950 4.388 4.888 Hmax_095 : 4.988 8.838 2.475 3.369 Hmax_100 : 14.700 10.100 2.449 4.820 Hmax_105 : 6.100 7.800 1.895 3.200 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9776 0.0224 DFMC : 0.9371 0.0629
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1065 PcyM_0416600 MKSRWCALLILLKCTPGEISESSSGLGSGPDGVQSSGPTSGVSDDSSKSPQQNAEQTIPGNGSSTGTTVSSPSGQPSGGG 80 GTDPQAGSGSAGETHNATQVPGTQIPAIPENAQDQSIEETITSNGGQNGDNVVSTVQNPEQANPQADSATQVAAPPPAIT 160 TNPIEVKSSLLKDQKGLKITGPCKSFFQVYLVPYLYMNVNAERSEIEMEPLFMKVDNRIKFEKEKHLLQNICAENKSFKL 240 VLYIYEGELTIKWKVYPPKGESTNDKTVDIRKYKMKDIGQPITSMQVMVMTEKHKTIYVESKNFSVMNDIPEKCDAIANE 320 CFMSGVLDIQKCYHCTLLLQKKDSAQECFNFVSPEIRSRFDDIQAKGEDEENPNEVELEGAIDKIFIKIYKKGENHYKEV 400 DQLAIMDSSFKSELLKYCSLMKETDSSGALDNHELGNAEEVFAHITTMLQSNSDLNVYSLKNKLKNPAICLKKVGHWIGS 480 KTGLVLPILEHSSVHDSANTYVETEGSTSNSATTQSADVHLLHVSDKLFCNADYCDWTKDTSSCIAKIEAQDQGDCATSW 560 LFASKVHLETIKCVKGYEHVPSSALYVANCSSKEAKDKCQAASNPLEFLNILEETKFLPAESDLPYSYKAVNNVCPEPKS 640 HWQNLWENVKLLDKQYQPNSVSTKGYTAYQSDHFKGNMDAFNKLVKSEVMNKGSAIAYVKAQGVMSYDLNGKKVLSLCGG 720 ETPDLAVNIVGYGNYINGEGVKKSYWLLQNSWGKHWGDKGKFKVDMHGPAHCQQNFIHTAAVFNVDIPVIVPAPNSDPEI 800 NNYYLKKSPDFFSNFYFNKLEAESDGNSGGAKNASNNLTVQGQEEPPVVPTEAQASHSGGSGSGQSAGGSANGQVQPGPG 880 TPVPEGSAVGSSPLQTVPSTSLPTNPDASAAPVQQNGGADQQVSPTLPGTPNSLATTGTTGQAPEQPTVQPTPQTVQVPS 960 AQPARAPLSTLTGSTGVIVTEVKEALHFLKNVKNGKVKSNFVSYDNADALGDEKVCSRAFSTDVDKQAECIEFCEKNWDA 1040 CKDKVSPGYCLTKKRGSNDCFFCFV 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ......................... 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0416600 2 -----MK|SR 0.080 . PcyM_0416600 4 ---MKSR|WC 0.080 . PcyM_0416600 13 ALLILLK|CT 0.057 . PcyM_0416600 48 VSDDSSK|SP 0.077 . PcyM_0416600 167 TNPIEVK|SS 0.069 . PcyM_0416600 172 VKSSLLK|DQ 0.068 . PcyM_0416600 175 SLLKDQK|GL 0.066 . PcyM_0416600 178 KDQKGLK|IT 0.071 . PcyM_0416600 184 KITGPCK|SF 0.079 . PcyM_0416600 203 MNVNAER|SE 0.144 . PcyM_0416600 214 MEPLFMK|VD 0.059 . PcyM_0416600 218 FMKVDNR|IK 0.106 . PcyM_0416600 220 KVDNRIK|FE 0.056 . PcyM_0416600 223 NRIKFEK|EK 0.073 . PcyM_0416600 225 IKFEKEK|HL 0.074 . PcyM_0416600 236 NICAENK|SF 0.071 . PcyM_0416600 239 AENKSFK|LV 0.086 . PcyM_0416600 252 EGELTIK|WK 0.056 . PcyM_0416600 254 ELTIKWK|VY 0.069 . PcyM_0416600 259 WKVYPPK|GE 0.090 . PcyM_0416600 266 GESTNDK|TV 0.091 . PcyM_0416600 271 DKTVDIR|KY 0.074 . PcyM_0416600 272 KTVDIRK|YK 0.091 . PcyM_0416600 274 VDIRKYK|MK 0.239 . PcyM_0416600 276 IRKYKMK|DI 0.183 . PcyM_0416600 293 VMVMTEK|HK 0.061 . PcyM_0416600 295 VMTEKHK|TI 0.066 . PcyM_0416600 302 TIYVESK|NF 0.081 . PcyM_0416600 313 MNDIPEK|CD 0.062 . PcyM_0416600 331 GVLDIQK|CY 0.056 . PcyM_0416600 341 CTLLLQK|KD 0.060 . PcyM_0416600 342 TLLLQKK|DS 0.135 . PcyM_0416600 357 FVSPEIR|SR 0.134 . PcyM_0416600 359 SPEIRSR|FD 0.122 . PcyM_0416600 366 FDDIQAK|GE 0.070 . PcyM_0416600 384 LEGAIDK|IF 0.063 . PcyM_0416600 388 IDKIFIK|IY 0.076 . PcyM_0416600 391 IFIKIYK|KG 0.061 . PcyM_0416600 392 FIKIYKK|GE 0.078 . PcyM_0416600 398 KGENHYK|EV 0.094 . PcyM_0416600 411 IMDSSFK|SE 0.062 . PcyM_0416600 416 FKSELLK|YC 0.074 . PcyM_0416600 422 KYCSLMK|ET 0.064 . PcyM_0416600 461 LNVYSLK|NK 0.059 . PcyM_0416600 463 VYSLKNK|LK 0.069 . PcyM_0416600 465 SLKNKLK|NP 0.069 . PcyM_0416600 472 NPAICLK|KV 0.099 . PcyM_0416600 473 PAICLKK|VG 0.085 . PcyM_0416600 481 GHWIGSK|TG 0.051 . PcyM_0416600 527 LLHVSDK|LF 0.069 . PcyM_0416600 539 DYCDWTK|DT 0.073 . PcyM_0416600 547 TSSCIAK|IE 0.079 . PcyM_0416600 565 SWLFASK|VH 0.057 . PcyM_0416600 572 VHLETIK|CV 0.075 . PcyM_0416600 575 ETIKCVK|GY 0.074 . PcyM_0416600 593 VANCSSK|EA 0.075 . PcyM_0416600 596 CSSKEAK|DK 0.134 . PcyM_0416600 598 SKEAKDK|CQ 0.074 . PcyM_0416600 616 NILEETK|FL 0.062 . PcyM_0416600 629 DLPYSYK|AV 0.084 . PcyM_0416600 639 NVCPEPK|SH 0.086 . PcyM_0416600 650 NLWENVK|LL 0.061 . PcyM_0416600 654 NVKLLDK|QY 0.056 . PcyM_0416600 664 PNSVSTK|GY 0.101 . PcyM_0416600 675 YQSDHFK|GN 0.095 . PcyM_0416600 683 NMDAFNK|LV 0.066 . PcyM_0416600 686 AFNKLVK|SE 0.069 . PcyM_0416600 692 KSEVMNK|GS 0.065 . PcyM_0416600 700 SAIAYVK|AQ 0.064 . PcyM_0416600 712 SYDLNGK|KV 0.059 . PcyM_0416600 713 YDLNGKK|VL 0.080 . PcyM_0416600 742 INGEGVK|KS 0.061 . PcyM_0416600 743 NGEGVKK|SY 0.124 . PcyM_0416600 754 LQNSWGK|HW 0.096 . PcyM_0416600 759 GKHWGDK|GK 0.086 . PcyM_0416600 761 HWGDKGK|FK 0.076 . PcyM_0416600 763 GDKGKFK|VD 0.078 . PcyM_0416600 806 INNYYLK|KS 0.065 . PcyM_0416600 807 NNYYLKK|SP 0.122 . PcyM_0416600 819 SNFYFNK|LE 0.064 . PcyM_0416600 832 GNSGGAK|NA 0.101 . PcyM_0416600 965 PSAQPAR|AP 0.094 . PcyM_0416600 983 VIVTEVK|EA 0.062 . PcyM_0416600 990 EALHFLK|NV 0.072 . PcyM_0416600 993 HFLKNVK|NG 0.053 . PcyM_0416600 996 KNVKNGK|VK 0.061 . PcyM_0416600 998 VKNGKVK|SN 0.100 . PcyM_0416600 1014 DALGDEK|VC 0.057 . PcyM_0416600 1018 DEKVCSR|AF 0.088 . PcyM_0416600 1026 FSTDVDK|QA 0.082 . PcyM_0416600 1036 CIEFCEK|NW 0.062 . PcyM_0416600 1042 KNWDACK|DK 0.062 . PcyM_0416600 1044 WDACKDK|VS 0.063 . PcyM_0416600 1053 PGYCLTK|KR 0.062 . PcyM_0416600 1054 GYCLTKK|RG 0.075 . PcyM_0416600 1055 YCLTKKR|GS 0.256 . ____________________________^_________________

  • Fasta :-

    >PcyM_0416600 ATGAAGTCTCGTTGGTGTGCCCTCTTGATATTATTGAAGTGCACCCCGGGTGAGATTAGT GAATCGAGTAGTGGACTGGGTAGTGGACCGGATGGTGTACAGAGTAGTGGGCCGACAAGT GGAGTATCAGATGATTCAAGTAAATCGCCACAGCAGAATGCTGAACAGACCATTCCAGGA AATGGCTCTTCCACTGGCACCACTGTTAGCTCCCCATCTGGGCAACCAAGTGGGGGAGGA GGCACAGATCCCCAAGCAGGATCAGGTAGCGCAGGTGAAACACATAATGCAACACAGGTA CCTGGAACACAGATACCTGCAATACCAGAGAATGCGCAAGATCAGTCTATTGAAGAAACT ATAACATCAAATGGAGGTCAAAATGGAGATAATGTAGTTTCCACTGTTCAAAATCCTGAA CAAGCGAATCCCCAAGCAGATTCCGCTACCCAAGTAGCTGCCCCTCCCCCCGCGATCACC ACAAATCCCATTGAGGTAAAATCGTCCTTGTTGAAGGACCAGAAGGGGCTCAAAATAACA GGTCCATGCAAGTCCTTCTTTCAAGTATACCTCGTACCCTATCTCTACATGAACGTTAAC GCAGAAAGAAGCGAAATTGAGATGGAGCCATTATTCATGAAGGTGGACAATAGGATCAAA TTTGAGAAGGAGAAACATCTCCTACAGAACATCTGTGCTGAAAATAAATCTTTTAAGCTT GTCTTGTACATTTACGAGGGAGAGCTAACCATTAAGTGGAAGGTCTATCCTCCCAAGGGG GAATCAACTAACGATAAAACGGTGGATATTAGAAAGTACAAAATGAAGGACATCGGCCAG CCTATCACTTCCATGCAAGTGATGGTGATGACTGAAAAGCATAAGACCATTTACGTGGAG AGCAAAAATTTCTCCGTCATGAATGATATCCCAGAGAAATGTGACGCGATTGCCAACGAG TGCTTCATGAGCGGTGTATTAGATATCCAGAAGTGCTACCACTGCACGCTGCTGCTTCAG AAGAAGGACAGCGCTCAGGAATGCTTCAATTTTGTGTCCCCCGAGATTAGAAGCAGATTT GATGATATACAAGCGAAGGGAGAAGACGAGGAGAACCCCAACGAAGTGGAACTGGAAGGA GCAATTGATAAAATATTCATCAAAATTTACAAAAAGGGAGAGAATCACTACAAAGAGGTG GATCAGCTAGCCATCATGGATTCTTCTTTTAAGTCTGAGTTGTTGAAGTACTGCTCATTA ATGAAGGAAACAGACTCAAGCGGTGCGCTGGACAATCACGAGCTGGGCAACGCTGAGGAG GTATTCGCACACATAACGACCATGCTGCAGAGCAACAGCGATCTTAATGTGTATTCACTA AAGAACAAGCTTAAAAATCCAGCCATATGTTTGAAGAAAGTTGGTCACTGGATTGGAAGC AAAACGGGATTGGTACTTCCCATCCTGGAGCATAGCAGCGTGCATGATAGCGCGAACACC TATGTTGAAACCGAAGGCAGCACTTCCAATTCGGCCACCACCCAGAGTGCAGATGTGCAT CTCTTACACGTATCAGATAAGCTGTTTTGCAATGCGGACTATTGCGATTGGACGAAGGAC ACCAGCAGCTGCATCGCAAAGATTGAGGCTCAGGACCAAGGAGACTGCGCCACGTCTTGG CTGTTCGCCTCGAAGGTGCACCTGGAAACGATAAAGTGTGTGAAGGGCTACGAACACGTC CCAAGTTCTGCTCTCTACGTGGCTAACTGTTCCAGTAAAGAAGCGAAGGACAAGTGTCAA GCTGCGTCTAACCCGCTAGAATTTTTGAACATCCTGGAGGAGACCAAATTTTTGCCAGCC GAGTCGGACCTTCCATACTCTTACAAAGCGGTGAATAACGTCTGCCCGGAGCCGAAGAGT CACTGGCAAAACTTATGGGAAAATGTGAAGCTCCTAGACAAGCAGTATCAACCCAACTCG GTAAGCACCAAGGGGTACACCGCCTACCAGAGTGACCACTTCAAAGGCAACATGGACGCG TTTAACAAGTTGGTAAAATCAGAAGTGATGAACAAAGGATCCGCAATCGCTTATGTGAAG GCACAAGGAGTGATGTCGTACGACCTGAATGGGAAGAAGGTGCTCTCTTTGTGTGGAGGT GAAACGCCCGACCTCGCTGTCAACATAGTAGGCTATGGTAACTACATAAACGGGGAAGGA GTGAAAAAGTCTTACTGGTTGCTACAAAACAGTTGGGGCAAGCACTGGGGAGATAAAGGC AAGTTTAAGGTGGACATGCATGGACCAGCCCATTGCCAACAGAACTTCATCCACACCGCT GCTGTCTTCAACGTGGACATCCCCGTGATCGTCCCCGCACCGAATAGCGACCCAGAAATA AATAACTACTACTTGAAGAAATCACCAGATTTTTTCAGTAACTTTTATTTTAATAAACTC GAGGCGGAAAGTGACGGCAATTCTGGCGGTGCAAAAAATGCTAGCAACAATTTGACCGTT CAGGGGCAAGAAGAGCCACCTGTAGTACCTACGGAAGCACAAGCATCACATAGTGGAGGT AGTGGATCAGGCCAATCAGCAGGAGGAAGTGCGAATGGACAAGTACAACCAGGGCCTGGG ACACCAGTACCAGAAGGAAGTGCAGTTGGTTCAAGCCCACTACAAACAGTTCCCAGCACT TCCTTACCCACTAATCCAGATGCATCTGCAGCACCCGTGCAACAAAATGGAGGAGCGGAT CAACAAGTATCACCTACATTACCAGGAACTCCCAATTCACTCGCGACTACGGGAACTACA GGGCAAGCGCCTGAGCAACCGACTGTGCAACCGACTCCGCAAACAGTGCAGGTACCATCA GCACAACCCGCCAGGGCGCCCCTCTCAACGTTGACGGGTAGCACTGGAGTTATCGTGACT GAAGTAAAGGAAGCTCTCCATTTCTTGAAGAACGTAAAGAATGGAAAAGTAAAAAGTAAT TTCGTGTCATACGATAATGCAGATGCCTTGGGTGATGAAAAAGTTTGCTCCAGAGCTTTC TCCACAGATGTCGATAAACAAGCGGAGTGCATCGAATTTTGTGAAAAGAATTGGGATGCA TGCAAAGACAAGGTGTCTCCTGGCTACTGCTTAACGAAGAAGAGAGGAAGCAACGACTGC TTCTTCTGCTTCGTGTAG
  • Download Fasta

  • Fasta :-

    MKSRWCALLILLKCTPGEISESSSGLGSGPDGVQSSGPTSGVSDDSSKSPQQNAEQTIPG NGSSTGTTVSSPSGQPSGGGGTDPQAGSGSAGETHNATQVPGTQIPAIPENAQDQSIEET ITSNGGQNGDNVVSTVQNPEQANPQADSATQVAAPPPAITTNPIEVKSSLLKDQKGLKIT GPCKSFFQVYLVPYLYMNVNAERSEIEMEPLFMKVDNRIKFEKEKHLLQNICAENKSFKL VLYIYEGELTIKWKVYPPKGESTNDKTVDIRKYKMKDIGQPITSMQVMVMTEKHKTIYVE SKNFSVMNDIPEKCDAIANECFMSGVLDIQKCYHCTLLLQKKDSAQECFNFVSPEIRSRF DDIQAKGEDEENPNEVELEGAIDKIFIKIYKKGENHYKEVDQLAIMDSSFKSELLKYCSL MKETDSSGALDNHELGNAEEVFAHITTMLQSNSDLNVYSLKNKLKNPAICLKKVGHWIGS KTGLVLPILEHSSVHDSANTYVETEGSTSNSATTQSADVHLLHVSDKLFCNADYCDWTKD TSSCIAKIEAQDQGDCATSWLFASKVHLETIKCVKGYEHVPSSALYVANCSSKEAKDKCQ AASNPLEFLNILEETKFLPAESDLPYSYKAVNNVCPEPKSHWQNLWENVKLLDKQYQPNS VSTKGYTAYQSDHFKGNMDAFNKLVKSEVMNKGSAIAYVKAQGVMSYDLNGKKVLSLCGG ETPDLAVNIVGYGNYINGEGVKKSYWLLQNSWGKHWGDKGKFKVDMHGPAHCQQNFIHTA AVFNVDIPVIVPAPNSDPEINNYYLKKSPDFFSNFYFNKLEAESDGNSGGAKNASNNLTV QGQEEPPVVPTEAQASHSGGSGSGQSAGGSANGQVQPGPGTPVPEGSAVGSSPLQTVPST SLPTNPDASAAPVQQNGGADQQVSPTLPGTPNSLATTGTTGQAPEQPTVQPTPQTVQVPS AQPARAPLSTLTGSTGVIVTEVKEALHFLKNVKNGKVKSNFVSYDNADALGDEKVCSRAF STDVDKQAECIEFCEKNWDACKDKVSPGYCLTKKRGSNDCFFCFV

  • title: active site
  • coordinates: Q553,S559,L725,N750
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0416600493 SLEHSSVHDS0.992unspPcyM_0416600493 SLEHSSVHDS0.992unspPcyM_0416600493 SLEHSSVHDS0.992unspPcyM_04166001057 SKKRGSNDCF0.993unspPcyM_041660046 SVSDDSSKSP0.992unspPcyM_041660071 STTVSSPSGQ0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India