PcyM_0529400 | conserved Plasmodium protein, unknown function

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0529400OTHER0.9999880.0000090.000003
No Results

  • Fasta :-

    >PcyM_0529400 MVDPMGEATCRSVERIFDGVSFNKSDRKKLQFEDKKLNRFFENGILNYSLVEVVGVPGTG KTQFALTLCAELLLKNMDEKKQAIVFYVYFNRMFPMRRLEEIIKSKLKLRGRRVHRGAEN GRSGKGAHGRGDAYGCFQRGNEKRMEQMEGLGEVGNRGERLHGEGLHDEGLHDEGLHDEG LHDEGLHDEVGQPNPAHAQNCPVRSALQNLYIQKINDEKDFFQLIKKDIYYILKHHQISL LVVDSLNSLFNANDNLDSYRKCQLFTGISQTLKKLAYENNFFLLVLNSWQPRRDYINFSF NIFDYVINSSFSNTIIFFKKRKRKNEIYRRMTIKHSEFLRKYKSMRFEINDSGFRVS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0529400.fa Sequence name : PcyM_0529400 Sequence length : 357 VALUES OF COMPUTED PARAMETERS Coef20 : 3.764 CoefTot : 0.000 ChDiff : 11 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.835 1.088 0.052 0.512 MesoH : -0.990 0.154 -0.529 0.133 MuHd_075 : 1.989 7.027 1.800 2.875 MuHd_095 : 65.475 32.401 14.340 11.464 MuHd_100 : 58.213 30.718 13.931 10.351 MuHd_105 : 39.986 22.014 10.955 7.492 Hmax_075 : -5.338 5.500 -2.478 2.500 Hmax_095 : 18.375 16.100 3.521 5.696 Hmax_100 : 17.600 17.100 4.723 5.870 Hmax_105 : 14.500 12.900 2.766 4.492 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1506 0.8494 DFMC : 0.6084 0.3916
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 357 PcyM_0529400 MVDPMGEATCRSVERIFDGVSFNKSDRKKLQFEDKKLNRFFENGILNYSLVEVVGVPGTGKTQFALTLCAELLLKNMDEK 80 KQAIVFYVYFNRMFPMRRLEEIIKSKLKLRGRRVHRGAENGRSGKGAHGRGDAYGCFQRGNEKRMEQMEGLGEVGNRGER 160 LHGEGLHDEGLHDEGLHDEGLHDEGLHDEVGQPNPAHAQNCPVRSALQNLYIQKINDEKDFFQLIKKDIYYILKHHQISL 240 LVVDSLNSLFNANDNLDSYRKCQLFTGISQTLKKLAYENNFFLLVLNSWQPRRDYINFSFNIFDYVINSSFSNTIIFFKK 320 RKRKNEIYRRMTIKHSEFLRKYKSMRFEINDSGFRVS 400 ................................................................................ 80 ...................................P............................................ 160 ................................................................................ 240 ................................................................................ 320 ..................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_0529400 11 MGEATCR|SV 0.279 . PcyM_0529400 15 TCRSVER|IF 0.116 . PcyM_0529400 24 DGVSFNK|SD 0.080 . PcyM_0529400 27 SFNKSDR|KK 0.099 . PcyM_0529400 28 FNKSDRK|KL 0.076 . PcyM_0529400 29 NKSDRKK|LQ 0.100 . PcyM_0529400 35 KLQFEDK|KL 0.069 . PcyM_0529400 36 LQFEDKK|LN 0.086 . PcyM_0529400 39 EDKKLNR|FF 0.122 . PcyM_0529400 61 GVPGTGK|TQ 0.057 . PcyM_0529400 75 CAELLLK|NM 0.056 . PcyM_0529400 80 LKNMDEK|KQ 0.065 . PcyM_0529400 81 KNMDEKK|QA 0.116 . PcyM_0529400 92 FYVYFNR|MF 0.073 . PcyM_0529400 97 NRMFPMR|RL 0.155 . PcyM_0529400 98 RMFPMRR|LE 0.107 . PcyM_0529400 104 RLEEIIK|SK 0.066 . PcyM_0529400 106 EEIIKSK|LK 0.062 . PcyM_0529400 108 IIKSKLK|LR 0.062 . PcyM_0529400 110 KSKLKLR|GR 0.102 . PcyM_0529400 112 KLKLRGR|RV 0.128 . PcyM_0529400 113 LKLRGRR|VH 0.376 . PcyM_0529400 116 RGRRVHR|GA 0.579 *ProP* PcyM_0529400 122 RGAENGR|SG 0.118 . PcyM_0529400 125 ENGRSGK|GA 0.266 . PcyM_0529400 130 GKGAHGR|GD 0.133 . PcyM_0529400 139 AYGCFQR|GN 0.114 . PcyM_0529400 143 FQRGNEK|RM 0.065 . PcyM_0529400 144 QRGNEKR|ME 0.252 . PcyM_0529400 157 LGEVGNR|GE 0.087 . PcyM_0529400 160 VGNRGER|LH 0.262 . PcyM_0529400 204 AQNCPVR|SA 0.200 . PcyM_0529400 214 QNLYIQK|IN 0.063 . PcyM_0529400 219 QKINDEK|DF 0.069 . PcyM_0529400 226 DFFQLIK|KD 0.057 . PcyM_0529400 227 FFQLIKK|DI 0.139 . PcyM_0529400 234 DIYYILK|HH 0.062 . PcyM_0529400 260 DNLDSYR|KC 0.074 . PcyM_0529400 261 NLDSYRK|CQ 0.061 . PcyM_0529400 273 GISQTLK|KL 0.067 . PcyM_0529400 274 ISQTLKK|LA 0.112 . PcyM_0529400 292 LNSWQPR|RD 0.103 . PcyM_0529400 293 NSWQPRR|DY 0.147 . PcyM_0529400 319 NTIIFFK|KR 0.057 . PcyM_0529400 320 TIIFFKK|RK 0.110 . PcyM_0529400 321 IIFFKKR|KR 0.141 . PcyM_0529400 322 IFFKKRK|RK 0.083 . PcyM_0529400 323 FFKKRKR|KN 0.204 . PcyM_0529400 324 FKKRKRK|NE 0.235 . PcyM_0529400 329 RKNEIYR|RM 0.098 . PcyM_0529400 330 KNEIYRR|MT 0.132 . PcyM_0529400 334 YRRMTIK|HS 0.080 . PcyM_0529400 340 KHSEFLR|KY 0.098 . PcyM_0529400 341 HSEFLRK|YK 0.110 . PcyM_0529400 343 EFLRKYK|SM 0.191 . PcyM_0529400 346 RKYKSMR|FE 0.093 . PcyM_0529400 355 INDSGFR|VS 0.069 . ____________________________^_________________

  • Fasta :-

    >PcyM_0529400 ATGGTAGACCCGATGGGAGAAGCCACGTGCAGATCTGTGGAGCGCATTTTCGACGGCGTC TCGTTTAACAAAAGTGACAGGAAAAAGCTCCAATTCGAGGACAAGAAGCTAAACCGCTTC TTCGAAAATGGGATACTGAATTACAGCCTCGTGGAGGTGGTAGGCGTGCCGGGCACCGGA AAAACGCAGTTCGCCCTGACCCTCTGCGCAGAGCTCCTTTTAAAAAATATGGACGAAAAA AAACAAGCCATAGTTTTTTATGTATACTTTAATCGAATGTTTCCCATGCGAAGGTTGGAA GAAATAATTAAGAGTAAGTTAAAGTTGAGGGGGAGACGTGTACATAGGGGGGCAGAAAAT GGTCGTAGTGGGAAAGGGGCGCATGGGAGGGGTGACGCGTATGGCTGTTTTCAGAGGGGG AATGAAAAGAGGATGGAGCAGATGGAGGGGCTTGGAGAAGTGGGCAACCGTGGAGAGAGA CTGCATGGTGAGGGACTGCATGATGAGGGACTGCATGATGAGGGACTGCATGATGAGGGA CTGCATGATGAGGGACTCCATGACGAGGTAGGCCAACCAAACCCAGCGCACGCACAGAAC TGCCCCGTCCGAAGTGCCCTGCAAAATTTGTACATACAAAAAATAAACGACGAAAAGGAT TTCTTTCAGTTAATAAAAAAAGACATATACTATATTTTGAAACATCACCAGATATCCCTC CTTGTGGTGGATTCACTAAACTCACTATTTAATGCAAATGATAACCTAGACTCATACAGG AAGTGCCAGCTTTTTACAGGAATATCTCAAACTCTAAAAAAACTAGCATATGAGAATAAC TTCTTTTTATTGGTACTTAACAGTTGGCAGCCACGGAGAGACTACATTAATTTTTCTTTC AACATTTTTGATTATGTCATTAATTCTTCCTTTTCCAATACGATTATATTTTTCAAAAAG AGGAAGAGAAAAAATGAAATATATCGTAGGATGACTATAAAGCATTCGGAATTTTTGCGC AAGTATAAATCGATGCGCTTCGAAATTAACGACTCGGGGTTTAGAGTGTCCTGA
  • Download Fasta

  • Fasta :-

    MVDPMGEATCRSVERIFDGVSFNKSDRKKLQFEDKKLNRFFENGILNYSLVEVVGVPGTG KTQFALTLCAELLLKNMDEKKQAIVFYVYFNRMFPMRRLEEIIKSKLKLRGRRVHRGAEN GRSGKGAHGRGDAYGCFQRGNEKRMEQMEGLGEVGNRGERLHGEGLHDEGLHDEGLHDEG LHDEGLHDEVGQPNPAHAQNCPVRSALQNLYIQKINDEKDFFQLIKKDIYYILKHHQISL LVVDSLNSLFNANDNLDSYRKCQLFTGISQTLKKLAYENNFFLLVLNSWQPRRDYINFSF NIFDYVINSSFSNTIIFFKKRKRKNEIYRRMTIKHSEFLRKYKSMRFEINDSGFRVS

  • title: Walker A motif
  • coordinates: G55,V56,G60,K61,T62
No Results
No Results
IDSitePeptideScoreMethod
PcyM_0529400332 TYRRMTIKHS0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India