PcyM_0534500 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0534500OTHER0.9998410.0000730.000086
No Results

  • Fasta :-

    >PcyM_0534500 MAEKESRDEEICLRGTRLDGAPKHDSFFNKDGLLLRSYAWLVKNAIGIIILIHGIKCHAR LNFLRPNVEVVSDDNVIVKDENNYYLYEDSWVEYFNKHGYSVFGLDLQGHGLSDGFEKLS YNVKDFDDFAYDVMQYIRNIQDSLNGSNVDDGGDSLSFRDDKICGRKPLPTYVVGLSMGG SVALRMLQILGKSQIENTGLNISGCISISPMITVEKLPSKNSFLFQCVLLPLSKFIADWF PRVRLISKYPYKMYPYVKYFIEYDKNRPKEAVTCKLGYELLRTIDNLDNDIKHMPKDIPV LIIHSKKDILCYYDGSLSFYNRLDVNNKEMHTLDDMEHTVIWEPGNEKVSKKIMDWIMGL SSEVGSTSKGSNVSEVSSASKVSSASEVSSASEVSSASEVSNSSEVSNSSEMVSSGSVSL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0534500.fa Sequence name : PcyM_0534500 Sequence length : 420 VALUES OF COMPUTED PARAMETERS Coef20 : 3.554 CoefTot : 0.141 ChDiff : -11 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.500 1.771 0.266 0.708 MesoH : 0.155 0.678 -0.173 0.301 MuHd_075 : 31.541 11.596 8.540 4.048 MuHd_095 : 15.969 3.794 3.835 2.702 MuHd_100 : 30.386 10.535 7.226 5.914 MuHd_105 : 37.606 14.677 9.548 7.882 Hmax_075 : -9.683 0.175 -2.205 1.003 Hmax_095 : -7.300 0.400 -2.309 0.360 Hmax_100 : -5.400 4.900 -1.603 1.510 Hmax_105 : 0.000 3.617 0.061 1.213 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9498 0.0502 DFMC : 0.9200 0.0800
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 420 PcyM_0534500 MAEKESRDEEICLRGTRLDGAPKHDSFFNKDGLLLRSYAWLVKNAIGIIILIHGIKCHARLNFLRPNVEVVSDDNVIVKD 80 ENNYYLYEDSWVEYFNKHGYSVFGLDLQGHGLSDGFEKLSYNVKDFDDFAYDVMQYIRNIQDSLNGSNVDDGGDSLSFRD 160 DKICGRKPLPTYVVGLSMGGSVALRMLQILGKSQIENTGLNISGCISISPMITVEKLPSKNSFLFQCVLLPLSKFIADWF 240 PRVRLISKYPYKMYPYVKYFIEYDKNRPKEAVTCKLGYELLRTIDNLDNDIKHMPKDIPVLIIHSKKDILCYYDGSLSFY 320 NRLDVNNKEMHTLDDMEHTVIWEPGNEKVSKKIMDWIMGLSSEVGSTSKGSNVSEVSSASKVSSASEVSSASEVSSASEV 400 SNSSEVSNSSEMVSSGSVSL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0534500 4 ---MAEK|ES 0.065 . PcyM_0534500 7 MAEKESR|DE 0.125 . PcyM_0534500 14 DEEICLR|GT 0.073 . PcyM_0534500 17 ICLRGTR|LD 0.165 . PcyM_0534500 23 RLDGAPK|HD 0.062 . PcyM_0534500 30 HDSFFNK|DG 0.079 . PcyM_0534500 36 KDGLLLR|SY 0.103 . PcyM_0534500 43 SYAWLVK|NA 0.069 . PcyM_0534500 56 ILIHGIK|CH 0.055 . PcyM_0534500 60 GIKCHAR|LN 0.091 . PcyM_0534500 65 ARLNFLR|PN 0.094 . PcyM_0534500 79 DDNVIVK|DE 0.067 . PcyM_0534500 97 WVEYFNK|HG 0.062 . PcyM_0534500 118 LSDGFEK|LS 0.062 . PcyM_0534500 124 KLSYNVK|DF 0.085 . PcyM_0534500 138 DVMQYIR|NI 0.106 . PcyM_0534500 159 GDSLSFR|DD 0.143 . PcyM_0534500 162 LSFRDDK|IC 0.132 . PcyM_0534500 166 DDKICGR|KP 0.067 . PcyM_0534500 167 DKICGRK|PL 0.077 . PcyM_0534500 185 GGSVALR|ML 0.109 . PcyM_0534500 192 MLQILGK|SQ 0.076 . PcyM_0534500 216 PMITVEK|LP 0.059 . PcyM_0534500 220 VEKLPSK|NS 0.059 . PcyM_0534500 234 VLLPLSK|FI 0.065 . PcyM_0534500 242 IADWFPR|VR 0.072 . PcyM_0534500 244 DWFPRVR|LI 0.092 . PcyM_0534500 248 RVRLISK|YP 0.067 . PcyM_0534500 252 ISKYPYK|MY 0.066 . PcyM_0534500 258 KMYPYVK|YF 0.067 . PcyM_0534500 265 YFIEYDK|NR 0.054 . PcyM_0534500 267 IEYDKNR|PK 0.113 . PcyM_0534500 269 YDKNRPK|EA 0.069 . PcyM_0534500 275 KEAVTCK|LG 0.069 . PcyM_0534500 282 LGYELLR|TI 0.086 . PcyM_0534500 292 NLDNDIK|HM 0.060 . PcyM_0534500 296 DIKHMPK|DI 0.074 . PcyM_0534500 306 VLIIHSK|KD 0.059 . PcyM_0534500 307 LIIHSKK|DI 0.164 . PcyM_0534500 322 SLSFYNR|LD 0.090 . PcyM_0534500 328 RLDVNNK|EM 0.065 . PcyM_0534500 348 WEPGNEK|VS 0.059 . PcyM_0534500 351 GNEKVSK|KI 0.097 . PcyM_0534500 352 NEKVSKK|IM 0.138 . PcyM_0534500 369 EVGSTSK|GS 0.067 . PcyM_0534500 381 EVSSASK|VS 0.075 . ____________________________^_________________

  • Fasta :-

    >PcyM_0534500 ATGGCCGAAAAGGAATCGCGCGATGAAGAAATATGCTTGAGGGGAACTCGGCTTGATGGG GCACCAAAGCATGATTCATTTTTTAATAAGGATGGGTTACTATTAAGAAGTTACGCATGG TTAGTAAAAAACGCCATAGGCATTATAATACTAATTCATGGAATTAAATGTCACGCGAGA CTAAACTTTTTAAGACCCAATGTAGAGGTAGTAAGCGACGATAACGTTATAGTGAAGGAT GAAAATAATTACTACCTTTATGAAGATAGCTGGGTAGAATATTTTAATAAACATGGGTAT TCCGTTTTTGGATTAGATTTACAAGGACACGGTTTATCAGATGGCTTTGAGAAGCTCAGC TATAATGTAAAAGATTTTGACGATTTCGCCTATGATGTAATGCAATATATTAGGAATATT CAGGATAGCTTAAATGGTTCTAATGTTGATGATGGGGGAGATAGTTTGTCATTTCGAGAT GACAAGATATGTGGGAGGAAGCCTCTGCCCACTTACGTAGTCGGTTTATCTATGGGGGGA AGTGTCGCTTTAAGGATGCTACAAATATTAGGAAAGTCACAAATAGAAAATACAGGACTA AACATCAGCGGGTGCATCTCCATCTCTCCGATGATAACTGTTGAGAAGCTACCATCCAAA AATTCGTTTTTATTTCAGTGCGTTTTACTCCCATTGTCAAAGTTCATTGCTGATTGGTTT CCAAGGGTGAGACTTATTAGCAAGTATCCGTATAAAATGTATCCTTATGTTAAATATTTT ATTGAGTATGATAAAAATCGACCTAAGGAGGCAGTCACGTGTAAATTGGGCTATGAGCTT TTGAGAACAATCGACAACTTAGACAATGACATAAAACACATGCCTAAAGACATTCCTGTG CTGATTATTCATTCTAAGAAGGACATTTTGTGCTACTATGACGGATCCCTATCGTTCTAC AACCGACTCGATGTAAACAATAAAGAAATGCACACATTGGATGATATGGAGCATACCGTC ATTTGGGAGCCCGGAAATGAGAAGGTTTCGAAGAAGATCATGGATTGGATTATGGGTCTG TCGTCAGAAGTGGGCAGCACGTCGAAGGGGAGCAACGTGTCTGAGGTGAGCAGCGCATCT AAGGTGAGCAGCGCATCTGAGGTGAGCAGCGCATCTGAGGTGAGCAGCGCATCTGAGGTG AGCAACTCATCTGAGGTGAGCAACTCATCTGAGATGGTTAGCTCAGGAAGTGTTTCTCTC TGA
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  • Fasta :-

    MAEKESRDEEICLRGTRLDGAPKHDSFFNKDGLLLRSYAWLVKNAIGIIILIHGIKCHAR LNFLRPNVEVVSDDNVIVKDENNYYLYEDSWVEYFNKHGYSVFGLDLQGHGLSDGFEKLS YNVKDFDDFAYDVMQYIRNIQDSLNGSNVDDGGDSLSFRDDKICGRKPLPTYVVGLSMGG SVALRMLQILGKSQIENTGLNISGCISISPMITVEKLPSKNSFLFQCVLLPLSKFIADWF PRVRLISKYPYKMYPYVKYFIEYDKNRPKEAVTCKLGYELLRTIDNLDNDIKHMPKDIPV LIIHSKKDILCYYDGSLSFYNRLDVNNKEMHTLDDMEHTVIWEPGNEKVSKKIMDWIMGL SSEVGSTSKGSNVSEVSSASKVSSASEVSSASEVSSASEVSNSSEVSNSSEMVSSGSVSL

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PcyM_0534500157 SGDSLSFRDD0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India