PcyM_0603700 | conserved Plasmodium protein, unknown function

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0603700SP0.3791610.6205990.000240CS pos: 28-29. LWG-LI. Pr: 0.3585
No Results

  • Fasta :-

    >PcyM_0603700 MDLNHVKYRGWFVLPLLLPFLLPFLLWGLILLDGGPERSDAVLGEKKGQEGETWGGSIIP LEVVPRNGSIITLGGLLSGGINLGVTKEGDARGKKDSPGKQDDQINNSVSQRGGRSSGGE AFPRRVYLPRREYLPCGNDNGWEEIHSEDEPVNSWDGLPDEVSHSIQNWVSVKYAYLKED AYRGGLIWDRSEVFYHGGIPKGVTNPSRVYEEGSIKWSGKKERGESHSLRVSPSNSCFGM CPNKYSMTRRMLASAKEDHLESPSNGTSNTDDPFKGSVLNLHFTENKNLFTNVKVGGQAL KLALNSRVEGIYVFMKNSQACYVGEEEDKNRICYDPNTSRNSTWCNNDLLCLPPILSKPY ECFSDSNLLLENKAEYPSMYYDSLKFTESHVEGSDDVEMVDLAVAKEAGKAGKAAGEAGE AGEAKEANEANGANGANGANVTNAAGEGGLGGAAQPRDGEDTTFQNTDVKLVTDLSLYNG WSLFKDTDGMMGLAGKELSCRNVSAWNSIVEKNKSLYALDVNLPEGSVKPFVESASQKDS KKGGSSYAKFVPKRASKNKADGVDASDGVDASDGVDASDGVDASDAAGVAAEPSETTSEI HIGDYKKNFGPIVWSEPRERGGIFSDSFMQFTLYNLEVCGNNIFGKYSSNWQGVIDLSSK CLVLPKMFWLSLMEYLPVNKNDERCIPKKKDVNFDESTIPRMCSVDASSRPLPVLKFYLS DNDIVSDNNIGGRSGVNEPSLGDSTQKKNIQEVNIPLDNLIINEEGQNDGYLCVLPDVHE GVSSENSGRTTKPLIKFGTYVINNFYVVVDQENYRVGFANKKNYHYTSERCTRRAECIGN QFYEPALNICVDPDCSIWYFYTLNEETKKCESISSRFYVFLLIILLLLLLDIQSYYFYRK SVHVAKVSSR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0603700.fa Sequence name : PcyM_0603700 Sequence length : 910 VALUES OF COMPUTED PARAMETERS Coef20 : 3.706 CoefTot : -0.541 ChDiff : -27 ZoneTo : 32 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.412 2.671 0.379 0.961 MesoH : -0.116 0.600 -0.237 0.378 MuHd_075 : 20.761 18.779 4.443 5.411 MuHd_095 : 10.181 20.677 5.525 3.448 MuHd_100 : 16.234 21.055 5.801 4.332 MuHd_105 : 19.284 19.500 5.109 5.045 Hmax_075 : 20.650 27.300 4.247 7.817 Hmax_095 : 20.213 27.213 4.094 7.700 Hmax_100 : 19.400 22.200 3.898 7.280 Hmax_105 : 19.600 15.487 1.005 7.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9936 0.0064 DFMC : 0.9924 0.0076
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 910 PcyM_0603700 MDLNHVKYRGWFVLPLLLPFLLPFLLWGLILLDGGPERSDAVLGEKKGQEGETWGGSIIPLEVVPRNGSIITLGGLLSGG 80 INLGVTKEGDARGKKDSPGKQDDQINNSVSQRGGRSSGGEAFPRRVYLPRREYLPCGNDNGWEEIHSEDEPVNSWDGLPD 160 EVSHSIQNWVSVKYAYLKEDAYRGGLIWDRSEVFYHGGIPKGVTNPSRVYEEGSIKWSGKKERGESHSLRVSPSNSCFGM 240 CPNKYSMTRRMLASAKEDHLESPSNGTSNTDDPFKGSVLNLHFTENKNLFTNVKVGGQALKLALNSRVEGIYVFMKNSQA 320 CYVGEEEDKNRICYDPNTSRNSTWCNNDLLCLPPILSKPYECFSDSNLLLENKAEYPSMYYDSLKFTESHVEGSDDVEMV 400 DLAVAKEAGKAGKAAGEAGEAGEAKEANEANGANGANGANVTNAAGEGGLGGAAQPRDGEDTTFQNTDVKLVTDLSLYNG 480 WSLFKDTDGMMGLAGKELSCRNVSAWNSIVEKNKSLYALDVNLPEGSVKPFVESASQKDSKKGGSSYAKFVPKRASKNKA 560 DGVDASDGVDASDGVDASDGVDASDAAGVAAEPSETTSEIHIGDYKKNFGPIVWSEPRERGGIFSDSFMQFTLYNLEVCG 640 NNIFGKYSSNWQGVIDLSSKCLVLPKMFWLSLMEYLPVNKNDERCIPKKKDVNFDESTIPRMCSVDASSRPLPVLKFYLS 720 DNDIVSDNNIGGRSGVNEPSLGDSTQKKNIQEVNIPLDNLIINEEGQNDGYLCVLPDVHEGVSSENSGRTTKPLIKFGTY 800 VINNFYVVVDQENYRVGFANKKNYHYTSERCTRRAECIGNQFYEPALNICVDPDCSIWYFYTLNEETKKCESISSRFYVF 880 LLIILLLLLLDIQSYYFYRKSVHVAKVSSR 960 ................................................................................ 80 ..................................P............................................. 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .............................. 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_0603700 7 MDLNHVK|YR 0.066 . PcyM_0603700 9 LNHVKYR|GW 0.154 . PcyM_0603700 38 LDGGPER|SD 0.105 . PcyM_0603700 46 DAVLGEK|KG 0.060 . PcyM_0603700 47 AVLGEKK|GQ 0.094 . PcyM_0603700 66 PLEVVPR|NG 0.098 . PcyM_0603700 87 INLGVTK|EG 0.061 . PcyM_0603700 92 TKEGDAR|GK 0.105 . PcyM_0603700 94 EGDARGK|KD 0.066 . PcyM_0603700 95 GDARGKK|DS 0.483 . PcyM_0603700 100 KKDSPGK|QD 0.079 . PcyM_0603700 112 NNSVSQR|GG 0.139 . PcyM_0603700 115 VSQRGGR|SS 0.545 *ProP* PcyM_0603700 124 GGEAFPR|RV 0.098 . PcyM_0603700 125 GEAFPRR|VY 0.121 . PcyM_0603700 130 RRVYLPR|RE 0.075 . PcyM_0603700 131 RVYLPRR|EY 0.124 . PcyM_0603700 173 QNWVSVK|YA 0.085 . PcyM_0603700 178 VKYAYLK|ED 0.057 . PcyM_0603700 183 LKEDAYR|GG 0.089 . PcyM_0603700 190 GGLIWDR|SE 0.086 . PcyM_0603700 201 YHGGIPK|GV 0.073 . PcyM_0603700 208 GVTNPSR|VY 0.086 . PcyM_0603700 216 YEEGSIK|WS 0.083 . PcyM_0603700 220 SIKWSGK|KE 0.070 . PcyM_0603700 221 IKWSGKK|ER 0.093 . PcyM_0603700 223 WSGKKER|GE 0.171 . PcyM_0603700 230 GESHSLR|VS 0.095 . PcyM_0603700 244 FGMCPNK|YS 0.066 . PcyM_0603700 249 NKYSMTR|RM 0.075 . PcyM_0603700 250 KYSMTRR|ML 0.207 . PcyM_0603700 256 RMLASAK|ED 0.063 . PcyM_0603700 275 NTDDPFK|GS 0.061 . PcyM_0603700 287 LHFTENK|NL 0.065 . PcyM_0603700 294 NLFTNVK|VG 0.069 . PcyM_0603700 301 VGGQALK|LA 0.060 . PcyM_0603700 307 KLALNSR|VE 0.099 . PcyM_0603700 316 GIYVFMK|NS 0.069 . PcyM_0603700 329 VGEEEDK|NR 0.056 . PcyM_0603700 331 EEEDKNR|IC 0.090 . PcyM_0603700 340 YDPNTSR|NS 0.076 . PcyM_0603700 358 LPPILSK|PY 0.058 . PcyM_0603700 373 NLLLENK|AE 0.057 . PcyM_0603700 385 MYYDSLK|FT 0.082 . PcyM_0603700 406 VDLAVAK|EA 0.099 . PcyM_0603700 410 VAKEAGK|AG 0.063 . PcyM_0603700 413 EAGKAGK|AA 0.107 . PcyM_0603700 425 GEAGEAK|EA 0.087 . PcyM_0603700 457 GGAAQPR|DG 0.158 . PcyM_0603700 470 FQNTDVK|LV 0.065 . PcyM_0603700 485 NGWSLFK|DT 0.071 . PcyM_0603700 496 MMGLAGK|EL 0.063 . PcyM_0603700 501 GKELSCR|NV 0.139 . PcyM_0603700 512 WNSIVEK|NK 0.070 . PcyM_0603700 514 SIVEKNK|SL 0.090 . PcyM_0603700 529 LPEGSVK|PF 0.065 . PcyM_0603700 538 VESASQK|DS 0.108 . PcyM_0603700 541 ASQKDSK|KG 0.072 . PcyM_0603700 542 SQKDSKK|GG 0.116 . PcyM_0603700 549 GGSSYAK|FV 0.089 . PcyM_0603700 553 YAKFVPK|RA 0.080 . PcyM_0603700 554 AKFVPKR|AS 0.223 . PcyM_0603700 557 VPKRASK|NK 0.146 . PcyM_0603700 559 KRASKNK|AD 0.090 . PcyM_0603700 606 IHIGDYK|KN 0.060 . PcyM_0603700 607 HIGDYKK|NF 0.143 . PcyM_0603700 618 IVWSEPR|ER 0.099 . PcyM_0603700 620 WSEPRER|GG 0.084 . PcyM_0603700 646 GNNIFGK|YS 0.102 . PcyM_0603700 660 VIDLSSK|CL 0.053 . PcyM_0603700 666 KCLVLPK|MF 0.064 . PcyM_0603700 680 EYLPVNK|ND 0.057 . PcyM_0603700 684 VNKNDER|CI 0.087 . PcyM_0603700 688 DERCIPK|KK 0.069 . PcyM_0603700 689 ERCIPKK|KD 0.091 . PcyM_0603700 690 RCIPKKK|DV 0.228 . PcyM_0603700 701 DESTIPR|MC 0.101 . PcyM_0603700 710 SVDASSR|PL 0.071 . PcyM_0603700 716 RPLPVLK|FY 0.064 . PcyM_0603700 733 DNNIGGR|SG 0.104 . PcyM_0603700 747 LGDSTQK|KN 0.065 . PcyM_0603700 748 GDSTQKK|NI 0.143 . PcyM_0603700 789 SSENSGR|TT 0.100 . PcyM_0603700 792 NSGRTTK|PL 0.148 . PcyM_0603700 796 TTKPLIK|FG 0.068 . PcyM_0603700 815 VDQENYR|VG 0.079 . PcyM_0603700 821 RVGFANK|KN 0.061 . PcyM_0603700 822 VGFANKK|NY 0.074 . PcyM_0603700 830 YHYTSER|CT 0.102 . PcyM_0603700 833 TSERCTR|RA 0.433 . PcyM_0603700 834 SERCTRR|AE 0.162 . PcyM_0603700 868 TLNEETK|KC 0.070 . PcyM_0603700 869 LNEETKK|CE 0.090 . PcyM_0603700 876 CESISSR|FY 0.106 . PcyM_0603700 899 QSYYFYR|KS 0.094 . PcyM_0603700 900 SYYFYRK|SV 0.191 . PcyM_0603700 906 KSVHVAK|VS 0.078 . PcyM_0603700 910 VAKVSSR|-- 0.101 . ____________________________^_________________

  • Fasta :-

    >PcyM_0603700 ATGGATTTGAATCATGTAAAATACAGAGGCTGGTTTGTTCTGCCGCTCCTTCTGCCGTTC CTTTTGCCATTCCTTCTGTGGGGATTGATCCTTCTGGATGGTGGGCCGGAGCGCAGTGAT GCAGTGTTGGGAGAGAAGAAGGGGCAGGAAGGAGAGACCTGGGGTGGAAGCATCATCCCC CTGGAAGTAGTCCCCAGGAATGGAAGCATCATCACGCTGGGGGGGTTGCTCTCAGGTGGA ATAAATTTGGGTGTAACCAAGGAGGGAGACGCTAGGGGGAAAAAGGACAGCCCTGGCAAG CAGGATGATCAAATAAATAATAGCGTTAGCCAAAGGGGTGGAAGAAGTAGCGGTGGAGAA GCATTCCCCAGGAGGGTGTACCTCCCCAGGAGGGAGTACCTCCCCTGTGGGAACGACAAC GGATGGGAAGAAATCCATAGTGAGGACGAGCCTGTGAACAGCTGGGATGGTCTCCCTGAT GAGGTTAGCCACTCCATACAAAACTGGGTAAGCGTGAAATATGCTTATTTGAAAGAGGAT GCATATCGAGGGGGGTTGATTTGGGATCGCAGTGAAGTCTTCTACCATGGAGGGATCCCC AAAGGGGTAACAAATCCATCTCGGGTATACGAAGAGGGGTCGATTAAGTGGAGTGGGAAG AAGGAAAGGGGAGAATCACATTCACTGAGGGTTAGTCCCTCTAACAGCTGCTTTGGTATG TGCCCCAATAAGTACAGCATGACGAGGCGAATGCTCGCATCTGCCAAGGAGGACCATCTA GAATCACCAAGCAATGGTACATCTAACACAGATGATCCCTTCAAAGGAAGTGTGTTAAAT TTGCATTTTACGGAGAACAAAAATTTGTTTACTAATGTAAAGGTAGGAGGACAAGCATTA AAGCTGGCACTGAACAGTAGGGTGGAGGGCATATATGTATTTATGAAGAACTCCCAAGCG TGCTACGTAGGTGAGGAGGAGGATAAGAATCGGATCTGTTACGACCCTAACACGTCTAGG AATTCTACCTGGTGCAATAACGACCTTCTTTGTCTGCCGCCCATCCTGTCCAAGCCGTAC GAGTGCTTCAGTGACAGCAATTTGCTGCTGGAGAACAAGGCGGAGTATCCCAGCATGTAC TACGACTCGCTGAAGTTTACGGAGAGCCACGTGGAGGGGTCGGACGACGTGGAGATGGTC GATTTGGCAGTGGCGAAGGAAGCGGGGAAAGCGGGGAAAGCGGCGGGTGAAGCAGGAGAA GCAGGAGAAGCAAAAGAGGCAAACGAGGCAAACGGAGCAAACGGAGCAAACGGAGCAAAC GTGACCAACGCGGCGGGCGAAGGCGGGCTGGGAGGCGCTGCCCAGCCGCGCGACGGGGAG GACACCACCTTCCAGAACACCGACGTGAAGCTGGTCACGGACCTCTCCCTGTACAATGGG TGGAGCCTATTCAAAGACACAGACGGGATGATGGGGCTGGCCGGAAAGGAACTCAGCTGC AGGAATGTCAGTGCTTGGAACAGCATCGTGGAGAAAAACAAATCTCTGTATGCCCTAGAT GTGAATTTGCCGGAAGGTTCCGTGAAACCCTTCGTGGAGTCAGCTAGCCAAAAGGACTCC AAAAAAGGGGGTTCATCCTACGCAAAGTTTGTTCCGAAGAGGGCAAGCAAAAATAAAGCA GATGGAGTAGATGCATCAGATGGAGTAGATGCATCGGATGGAGTAGATGCATCGGATGGA GTAGATGCATCGGATGCAGCAGGTGTAGCGGCGGAACCGAGTGAAACCACATCTGAAATA CATATTGGAGATTATAAAAAAAACTTTGGACCAATCGTATGGTCGGAACCAAGAGAAAGA GGAGGAATTTTTTCCGATTCATTCATGCAGTTTACCCTGTACAATTTGGAAGTGTGTGGT AATAATATATTTGGAAAATACAGTAGCAATTGGCAAGGAGTGATAGACTTGAGTAGCAAG TGTTTGGTTCTACCAAAGATGTTCTGGTTGAGTTTGATGGAGTATCTACCCGTGAACAAA AATGACGAGAGGTGTATTCCTAAGAAAAAAGATGTTAACTTTGATGAGAGTACCATACCG AGGATGTGTTCTGTGGATGCCAGCAGTAGACCACTACCTGTGTTAAAATTCTACCTTTCG GATAACGACATCGTGAGTGACAATAACATAGGAGGAAGGAGTGGTGTCAATGAACCATCA CTTGGAGACTCCACACAGAAGAAGAACATACAAGAAGTAAATATCCCGTTGGATAATCTC ATAATAAATGAGGAGGGTCAGAACGACGGCTACCTCTGTGTGTTGCCAGATGTACATGAA GGAGTTTCAAGTGAAAATAGCGGAAGGACCACCAAGCCGTTAATTAAGTTCGGCACGTAT GTTATCAATAATTTTTATGTTGTGGTGGATCAAGAAAATTATCGAGTAGGGTTTGCTAAC AAGAAAAATTACCACTACACAAGTGAGAGATGCACACGGAGGGCTGAGTGTATAGGGAAT CAGTTTTACGAACCAGCTTTGAATATCTGTGTGGACCCTGACTGTTCGATATGGTACTTT TACACACTAAATGAGGAAACAAAGAAATGTGAATCCATTTCGTCCCGCTTCTACGTCTTC CTGCTCATCATCCTGCTGCTGCTGCTGCTGGATATACAGTCGTACTACTTTTACAGGAAG TCGGTGCACGTGGCGAAGGTGTCCTCGCGCTAG
  • Download Fasta

  • Fasta :-

    MDLNHVKYRGWFVLPLLLPFLLPFLLWGLILLDGGPERSDAVLGEKKGQEGETWGGSIIP LEVVPRNGSIITLGGLLSGGINLGVTKEGDARGKKDSPGKQDDQINNSVSQRGGRSSGGE AFPRRVYLPRREYLPCGNDNGWEEIHSEDEPVNSWDGLPDEVSHSIQNWVSVKYAYLKED AYRGGLIWDRSEVFYHGGIPKGVTNPSRVYEEGSIKWSGKKERGESHSLRVSPSNSCFGM CPNKYSMTRRMLASAKEDHLESPSNGTSNTDDPFKGSVLNLHFTENKNLFTNVKVGGQAL KLALNSRVEGIYVFMKNSQACYVGEEEDKNRICYDPNTSRNSTWCNNDLLCLPPILSKPY ECFSDSNLLLENKAEYPSMYYDSLKFTESHVEGSDDVEMVDLAVAKEAGKAGKAAGEAGE AGEAKEANEANGANGANGANVTNAAGEGGLGGAAQPRDGEDTTFQNTDVKLVTDLSLYNG WSLFKDTDGMMGLAGKELSCRNVSAWNSIVEKNKSLYALDVNLPEGSVKPFVESASQKDS KKGGSSYAKFVPKRASKNKADGVDASDGVDASDGVDASDGVDASDAAGVAAEPSETTSEI HIGDYKKNFGPIVWSEPRERGGIFSDSFMQFTLYNLEVCGNNIFGKYSSNWQGVIDLSSK CLVLPKMFWLSLMEYLPVNKNDERCIPKKKDVNFDESTIPRMCSVDASSRPLPVLKFYLS DNDIVSDNNIGGRSGVNEPSLGDSTQKKNIQEVNIPLDNLIINEEGQNDGYLCVLPDVHE GVSSENSGRTTKPLIKFGTYVINNFYVVVDQENYRVGFANKKNYHYTSERCTRRAECIGN QFYEPALNICVDPDCSIWYFYTLNEETKKCESISSRFYVFLLIILLLLLLDIQSYYFYRK SVHVAKVSSR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0603700117 SGGRSSGGEA0.998unspPcyM_0603700117 SGGRSSGGEA0.998unspPcyM_0603700117 SGGRSSGGEA0.998unspPcyM_0603700232 SSLRVSPSNS0.996unspPcyM_0603700254 SRMLASAKED0.991unspPcyM_0603700536 SVESASQKDS0.998unspPcyM_0603700540 SSQKDSKKGG0.995unspPcyM_060370097 SGKKDSPGKQ0.997unspPcyM_0603700110 SNNSVSQRGG0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India