PcyM_0621600 | DER1-like protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0621600OTHER0.9999910.0000030.000006
No Results

  • Fasta :-

    >PcyM_0621600 MDISGPEVWYGNLPNVTKYLITLIFLVTLLITCNLLNVVYLLLDWNLIYNNYQLWRIFFN FMYVGKFSLSWVFFMSLLAQFSSSLEKNAVFSSPGSYLYFITIQCTFLSLISILFYWPRG YPFLGNSLLFAIIYYWSRREAWSQVSIYFFTVKGYQLPFALIFLHLIMGQSLWVDIMGLM SGHIYYFFRELLPREGGPNLLEKTPKIFDKIMMKLREFRLNQGIRGNFSRYGYRSVSDSR TPNSEGPTRRVFIGRGVRLGDS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0621600.fa Sequence name : PcyM_0621600 Sequence length : 262 VALUES OF COMPUTED PARAMETERS Coef20 : 3.055 CoefTot : 0.000 ChDiff : 10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.118 2.588 0.470 0.798 MesoH : 0.972 1.103 -0.026 0.491 MuHd_075 : 13.767 7.582 2.344 1.037 MuHd_095 : 23.035 13.470 5.161 3.803 MuHd_100 : 12.738 8.470 3.145 3.290 MuHd_105 : 12.497 9.770 4.769 3.611 Hmax_075 : 3.400 6.200 -1.758 2.850 Hmax_095 : 9.362 7.525 -0.512 3.850 Hmax_100 : 1.900 2.100 -2.080 2.740 Hmax_105 : 10.700 10.383 1.628 4.740 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9802 0.0198 DFMC : 0.9890 0.0110
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 262 PcyM_0621600 MDISGPEVWYGNLPNVTKYLITLIFLVTLLITCNLLNVVYLLLDWNLIYNNYQLWRIFFNFMYVGKFSLSWVFFMSLLAQ 80 FSSSLEKNAVFSSPGSYLYFITIQCTFLSLISILFYWPRGYPFLGNSLLFAIIYYWSRREAWSQVSIYFFTVKGYQLPFA 160 LIFLHLIMGQSLWVDIMGLMSGHIYYFFRELLPREGGPNLLEKTPKIFDKIMMKLREFRLNQGIRGNFSRYGYRSVSDSR 240 TPNSEGPTRRVFIGRGVRLGDS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0621600 18 NLPNVTK|YL 0.070 . PcyM_0621600 56 NNYQLWR|IF 0.085 . PcyM_0621600 66 NFMYVGK|FS 0.066 . PcyM_0621600 87 FSSSLEK|NA 0.066 . PcyM_0621600 119 ILFYWPR|GY 0.095 . PcyM_0621600 138 IIYYWSR|RE 0.076 . PcyM_0621600 139 IYYWSRR|EA 0.193 . PcyM_0621600 153 IYFFTVK|GY 0.059 . PcyM_0621600 189 HIYYFFR|EL 0.107 . PcyM_0621600 194 FRELLPR|EG 0.102 . PcyM_0621600 203 GPNLLEK|TP 0.067 . PcyM_0621600 206 LLEKTPK|IF 0.086 . PcyM_0621600 210 TPKIFDK|IM 0.079 . PcyM_0621600 214 FDKIMMK|LR 0.060 . PcyM_0621600 216 KIMMKLR|EF 0.090 . PcyM_0621600 219 MKLREFR|LN 0.245 . PcyM_0621600 225 RLNQGIR|GN 0.091 . PcyM_0621600 230 IRGNFSR|YG 0.131 . PcyM_0621600 234 FSRYGYR|SV 0.297 . PcyM_0621600 240 RSVSDSR|TP 0.082 . PcyM_0621600 249 NSEGPTR|RV 0.133 . PcyM_0621600 250 SEGPTRR|VF 0.141 . PcyM_0621600 255 RRVFIGR|GV 0.182 . PcyM_0621600 258 FIGRGVR|LG 0.141 . ____________________________^_________________

  • Fasta :-

    >PcyM_0621600 ATGGATATATCCGGGCCGGAGGTTTGGTATGGCAACTTACCAAATGTAACCAAATATTTA ATAACCCTAATTTTTTTAGTGACCCTTCTCATAACATGCAACTTACTAAATGTTGTGTAC CTTCTGCTGGACTGGAATTTAATATATAATAATTACCAACTGTGGAGGATTTTTTTTAAC TTTATGTACGTGGGGAAGTTCTCTCTTTCTTGGGTTTTTTTTATGTCTTTATTGGCCCAG TTTTCTTCCTCCCTCGAGAAAAACGCAGTGTTCTCCAGCCCAGGATCATATTTGTACTTT ATCACCATTCAGTGTACCTTCCTATCACTTATAAGCATTTTGTTTTATTGGCCCAGAGGC TACCCCTTCTTGGGAAACTCCCTTTTGTTCGCCATCATTTACTACTGGTCCAGGAGGGAG GCATGGAGCCAAGTGTCCATTTACTTCTTCACGGTGAAGGGCTACCAGCTACCCTTCGCA CTTATTTTCCTGCACCTTATCATGGGACAGTCCCTTTGGGTGGATATTATGGGCCTCATG TCCGGACATATCTACTACTTTTTCAGAGAGCTTCTCCCGAGGGAAGGAGGACCAAATTTG CTCGAAAAAACGCCCAAAATTTTCGATAAAATCATGATGAAGCTGAGGGAGTTCCGCCTA AATCAGGGAATAAGGGGAAACTTCTCAAGGTACGGATACAGAAGTGTGAGTGACTCCAGG ACGCCCAACAGTGAGGGGCCCACAAGGAGAGTCTTCATTGGTCGGGGAGTCAGACTAGGT GACAGTTGA
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  • Fasta :-

    MDISGPEVWYGNLPNVTKYLITLIFLVTLLITCNLLNVVYLLLDWNLIYNNYQLWRIFFN FMYVGKFSLSWVFFMSLLAQFSSSLEKNAVFSSPGSYLYFITIQCTFLSLISILFYWPRG YPFLGNSLLFAIIYYWSRREAWSQVSIYFFTVKGYQLPFALIFLHLIMGQSLWVDIMGLM SGHIYYFFRELLPREGGPNLLEKTPKIFDKIMMKLREFRLNQGIRGNFSRYGYRSVSDSR TPNSEGPTRRVFIGRGVRLGDS

    No Results
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No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0621600235 SYGYRSVSDS0.998unspPcyM_0621600237 SYRSVSDSRT0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India