PcyM_0711700 | protease, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0711700SP0.2865920.7062810.007126CS pos: 18-19. VGC-FN. Pr: 0.6167
No Results

  • Fasta :-

    >PcyM_0711700 MMLPFFCIGLILQLYVGCFNVKKNIIVTCPWGRGENKKEVKSSAFLVRKQFFKFKKFRAH SSDHWEGKPPIDAAQNGAKNTLSEFYHRNCRRLRKTFELVKSGLISIQDNLFSNSLASQL AISVSFFLLHFYMLSRHFLILFPYQLIPNHSNILMSLDMNNTLFFLMSIFFFKRFKAHFH SFKQRLQLNRFTIKLQDHKRKNILSVCFFLIASYVLSGYVSIYTERILTLWKLFSHPRSD NVVKSLQILTGHFIWVACSIVVFKQLLYPYFLNNESNLNLRHKDSWYFEVIYGYVFSHFV FSIVDLLNNFIINRFMGEAQDEVYVDNSIDDIVSGREFVSTLLCIISPCFSAPFFEEFIY RFFVLKSLNLFMHIHYAVTFSSLFFAIHHLNIFNLLPLFFLSFLWSYIYIYTDNILVTML IHSFWNIYVFLSSLYS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0711700.fa Sequence name : PcyM_0711700 Sequence length : 436 VALUES OF COMPUTED PARAMETERS Coef20 : 4.028 CoefTot : -1.689 ChDiff : 16 ZoneTo : 34 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.982 2.035 0.455 0.779 MesoH : 1.086 1.230 -0.043 0.564 MuHd_075 : 24.706 20.827 5.873 7.546 MuHd_095 : 13.803 16.939 8.208 3.730 MuHd_100 : 16.624 18.829 8.355 4.321 MuHd_105 : 23.918 21.513 8.769 5.668 Hmax_075 : 7.467 25.300 5.138 5.063 Hmax_095 : 9.800 20.912 6.004 5.504 Hmax_100 : 12.900 22.900 6.710 6.870 Hmax_105 : 13.767 22.700 8.048 6.950 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3693 0.6307 DFMC : 0.5940 0.4060
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 436 PcyM_0711700 MMLPFFCIGLILQLYVGCFNVKKNIIVTCPWGRGENKKEVKSSAFLVRKQFFKFKKFRAHSSDHWEGKPPIDAAQNGAKN 80 TLSEFYHRNCRRLRKTFELVKSGLISIQDNLFSNSLASQLAISVSFFLLHFYMLSRHFLILFPYQLIPNHSNILMSLDMN 160 NTLFFLMSIFFFKRFKAHFHSFKQRLQLNRFTIKLQDHKRKNILSVCFFLIASYVLSGYVSIYTERILTLWKLFSHPRSD 240 NVVKSLQILTGHFIWVACSIVVFKQLLYPYFLNNESNLNLRHKDSWYFEVIYGYVFSHFVFSIVDLLNNFIINRFMGEAQ 320 DEVYVDNSIDDIVSGREFVSTLLCIISPCFSAPFFEEFIYRFFVLKSLNLFMHIHYAVTFSSLFFAIHHLNIFNLLPLFF 400 LSFLWSYIYIYTDNILVTMLIHSFWNIYVFLSSLYS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0711700 22 VGCFNVK|KN 0.060 . PcyM_0711700 23 GCFNVKK|NI 0.102 . PcyM_0711700 33 VTCPWGR|GE 0.093 . PcyM_0711700 37 WGRGENK|KE 0.058 . PcyM_0711700 38 GRGENKK|EV 0.192 . PcyM_0711700 41 ENKKEVK|SS 0.073 . PcyM_0711700 48 SSAFLVR|KQ 0.106 . PcyM_0711700 49 SAFLVRK|QF 0.083 . PcyM_0711700 53 VRKQFFK|FK 0.070 . PcyM_0711700 55 KQFFKFK|KF 0.069 . PcyM_0711700 56 QFFKFKK|FR 0.108 . PcyM_0711700 58 FKFKKFR|AH 0.104 . PcyM_0711700 68 SDHWEGK|PP 0.078 . PcyM_0711700 79 AAQNGAK|NT 0.065 . PcyM_0711700 88 LSEFYHR|NC 0.095 . PcyM_0711700 91 FYHRNCR|RL 0.210 . PcyM_0711700 92 YHRNCRR|LR 0.119 . PcyM_0711700 94 RNCRRLR|KT 0.252 . PcyM_0711700 95 NCRRLRK|TF 0.214 . PcyM_0711700 101 KTFELVK|SG 0.063 . PcyM_0711700 136 HFYMLSR|HF 0.081 . PcyM_0711700 173 MSIFFFK|RF 0.076 . PcyM_0711700 174 SIFFFKR|FK 0.165 . PcyM_0711700 176 FFFKRFK|AH 0.066 . PcyM_0711700 183 AHFHSFK|QR 0.064 . PcyM_0711700 185 FHSFKQR|LQ 0.103 . PcyM_0711700 190 QRLQLNR|FT 0.131 . PcyM_0711700 194 LNRFTIK|LQ 0.072 . PcyM_0711700 199 IKLQDHK|RK 0.055 . PcyM_0711700 200 KLQDHKR|KN 0.164 . PcyM_0711700 201 LQDHKRK|NI 0.095 . PcyM_0711700 226 VSIYTER|IL 0.073 . PcyM_0711700 232 RILTLWK|LF 0.057 . PcyM_0711700 238 KLFSHPR|SD 0.126 . PcyM_0711700 244 RSDNVVK|SL 0.096 . PcyM_0711700 264 CSIVVFK|QL 0.059 . PcyM_0711700 281 ESNLNLR|HK 0.090 . PcyM_0711700 283 NLNLRHK|DS 0.082 . PcyM_0711700 314 NNFIINR|FM 0.118 . PcyM_0711700 336 DDIVSGR|EF 0.080 . PcyM_0711700 361 FEEFIYR|FF 0.075 . PcyM_0711700 366 YRFFVLK|SL 0.085 . ____________________________^_________________

  • Fasta :-

    >PcyM_0711700 ATGATGCTTCCTTTTTTTTGCATTGGCCTAATTCTGCAGTTGTACGTCGGGTGCTTCAAC GTAAAAAAAAACATAATAGTGACATGCCCATGGGGAAGAGGAGAAAACAAGAAGGAAGTC AAATCGAGTGCATTTCTAGTGAGGAAACAATTTTTTAAATTTAAAAAATTTCGAGCTCAT TCATCAGACCATTGGGAGGGCAAACCTCCCATTGATGCAGCACAGAATGGAGCAAAGAAT ACCCTAAGCGAATTCTACCATCGAAATTGTAGGCGACTGAGGAAGACATTCGAATTAGTT AAAAGTGGTCTAATCTCCATTCAGGATAATTTATTTTCAAATTCGTTAGCTAGCCAGCTA GCCATTTCTGTGTCATTTTTTCTTCTCCACTTTTATATGCTATCTCGTCACTTCCTCATA TTATTCCCCTATCAGTTAATTCCAAACCATTCCAATATTTTGATGAGCCTAGACATGAAC AACACGCTCTTTTTCTTAATGTCCATATTTTTTTTCAAACGTTTCAAGGCCCACTTTCAC AGCTTCAAGCAGAGGTTACAGTTGAACCGATTTACCATCAAGCTACAGGACCATAAGAGG AAAAACATCCTCTCCGTCTGCTTCTTCTTGATTGCATCCTACGTCTTGTCCGGCTACGTG TCCATATACACGGAGCGCATCTTGACGCTGTGGAAACTGTTCAGTCACCCCCGCTCGGAT AACGTGGTGAAGTCGCTACAGATCCTGACCGGGCACTTCATATGGGTAGCGTGTAGCATC GTCGTGTTTAAGCAGTTGCTGTACCCCTACTTCCTAAACAATGAAAGCAATTTGAATTTG CGCCACAAGGACAGCTGGTACTTTGAGGTAATCTACGGGTACGTCTTTTCCCACTTCGTA TTCAGCATTGTGGATTTGCTGAACAATTTTATAATAAATCGTTTCATGGGGGAGGCGCAA GACGAGGTGTACGTGGACAACAGTATAGATGACATTGTTAGCGGAAGAGAGTTCGTTTCA ACTCTGCTGTGCATTATTAGTCCCTGTTTTAGTGCGCCTTTTTTTGAGGAATTCATTTAT CGTTTTTTTGTACTGAAGAGTTTGAATTTGTTCATGCATATACATTACGCCGTTACCTTT TCTTCCCTATTTTTCGCAATTCACCATTTGAACATTTTTAACTTACTTCCTTTGTTTTTC CTGTCCTTCCTATGGTCCTACATTTATATATACACTGACAACATTCTCGTCACTATGCTT ATTCACTCGTTTTGGAACATTTACGTTTTTTTGTCCTCCCTCTACAGCTAG
  • Download Fasta

  • Fasta :-

    MMLPFFCIGLILQLYVGCFNVKKNIIVTCPWGRGENKKEVKSSAFLVRKQFFKFKKFRAH SSDHWEGKPPIDAAQNGAKNTLSEFYHRNCRRLRKTFELVKSGLISIQDNLFSNSLASQL AISVSFFLLHFYMLSRHFLILFPYQLIPNHSNILMSLDMNNTLFFLMSIFFFKRFKAHFH SFKQRLQLNRFTIKLQDHKRKNILSVCFFLIASYVLSGYVSIYTERILTLWKLFSHPRSD NVVKSLQILTGHFIWVACSIVVFKQLLYPYFLNNESNLNLRHKDSWYFEVIYGYVFSHFV FSIVDLLNNFIINRFMGEAQDEVYVDNSIDDIVSGREFVSTLLCIISPCFSAPFFEEFIY RFFVLKSLNLFMHIHYAVTFSSLFFAIHHLNIFNLLPLFFLSFLWSYIYIYTDNILVTML IHSFWNIYVFLSSLYS

    No Results
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IDSitePeptideScoreMethod
PcyM_0711700334 SDDIVSGREF0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India