PcyM_0717600 | PPPDE peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0717600OTHER0.9967260.0028130.000460
No Results

  • Fasta :-

    >PcyM_0717600 MNIWLHTYTLDVPFFLKNVRHTGIEIFGSEYTFSMDGITTCKPKKSTIGQYCKSYELTFV KITYSQFSEILNALGKIYRPNTYNFVCKNCNHFCDDLFELLSGKRLFHTFMIYSRLGKLF GSFKNLALCGYIDSMELSGNDKEMYVYALKLSKSIIRRNRKASIGVAGKSQSSLPNGLTD KSQSSLPNGLPGNLTSTLPNALPSALPSALPSNLPPCLTSPLPPLHFNKPSDNYCNQFYS PSPIYVIPYAPYANDSCMGQNVFYGENTFNGPMKSLPDEVQKGVFPNSQFRTVYSISTND SFSMA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0717600.fa Sequence name : PcyM_0717600 Sequence length : 305 VALUES OF COMPUTED PARAMETERS Coef20 : 4.075 CoefTot : -1.256 ChDiff : 8 ZoneTo : 24 KR : 2 DE : 1 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.035 0.882 0.050 0.403 MesoH : 0.032 0.163 -0.264 0.216 MuHd_075 : 24.143 16.926 6.730 4.996 MuHd_095 : 17.374 14.578 7.172 4.748 MuHd_100 : 20.813 18.814 8.389 5.775 MuHd_105 : 25.790 19.900 8.632 6.012 Hmax_075 : 19.600 17.000 3.194 6.592 Hmax_095 : 15.700 13.000 -0.105 6.670 Hmax_100 : 15.700 16.800 2.646 6.670 Hmax_105 : 8.800 21.117 3.537 4.070 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8939 0.1061 DFMC : 0.8844 0.1156
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 305 PcyM_0717600 MNIWLHTYTLDVPFFLKNVRHTGIEIFGSEYTFSMDGITTCKPKKSTIGQYCKSYELTFVKITYSQFSEILNALGKIYRP 80 NTYNFVCKNCNHFCDDLFELLSGKRLFHTFMIYSRLGKLFGSFKNLALCGYIDSMELSGNDKEMYVYALKLSKSIIRRNR 160 KASIGVAGKSQSSLPNGLTDKSQSSLPNGLPGNLTSTLPNALPSALPSALPSNLPPCLTSPLPPLHFNKPSDNYCNQFYS 240 PSPIYVIPYAPYANDSCMGQNVFYGENTFNGPMKSLPDEVQKGVFPNSQFRTVYSISTNDSFSMA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0717600 17 DVPFFLK|NV 0.068 . PcyM_0717600 20 FFLKNVR|HT 0.105 . PcyM_0717600 42 DGITTCK|PK 0.058 . PcyM_0717600 44 ITTCKPK|KS 0.071 . PcyM_0717600 45 TTCKPKK|ST 0.212 . PcyM_0717600 53 TIGQYCK|SY 0.079 . PcyM_0717600 61 YELTFVK|IT 0.063 . PcyM_0717600 76 ILNALGK|IY 0.067 . PcyM_0717600 79 ALGKIYR|PN 0.087 . PcyM_0717600 88 TYNFVCK|NC 0.075 . PcyM_0717600 104 FELLSGK|RL 0.058 . PcyM_0717600 105 ELLSGKR|LF 0.098 . PcyM_0717600 115 TFMIYSR|LG 0.068 . PcyM_0717600 118 IYSRLGK|LF 0.131 . PcyM_0717600 124 KLFGSFK|NL 0.060 . PcyM_0717600 142 ELSGNDK|EM 0.060 . PcyM_0717600 150 MYVYALK|LS 0.056 . PcyM_0717600 153 YALKLSK|SI 0.069 . PcyM_0717600 157 LSKSIIR|RN 0.081 . PcyM_0717600 158 SKSIIRR|NR 0.182 . PcyM_0717600 160 SIIRRNR|KA 0.453 . PcyM_0717600 161 IIRRNRK|AS 0.268 . PcyM_0717600 169 SIGVAGK|SQ 0.081 . PcyM_0717600 181 PNGLTDK|SQ 0.077 . PcyM_0717600 229 PPLHFNK|PS 0.072 . PcyM_0717600 274 TFNGPMK|SL 0.115 . PcyM_0717600 282 LPDEVQK|GV 0.083 . PcyM_0717600 291 FPNSQFR|TV 0.122 . ____________________________^_________________

  • Fasta :-

    >PcyM_0717600 ATGAATATCTGGCTGCACACCTACACCCTAGACGTTCCCTTTTTTCTGAAAAATGTGCGC CACACGGGAATCGAAATTTTCGGAAGCGAGTACACCTTCTCCATGGATGGAATCACCACT TGCAAGCCAAAGAAGTCGACCATCGGACAGTACTGTAAAAGCTACGAATTGACCTTCGTG AAAATAACCTACTCTCAGTTTTCCGAAATTTTAAATGCCCTTGGAAAAATATACAGACCC AACACGTATAACTTCGTGTGTAAAAACTGCAACCATTTCTGCGATGACTTATTTGAGTTA CTGAGTGGAAAAAGATTATTTCATACATTTATGATTTATTCTCGATTGGGAAAACTTTTC GGAAGTTTTAAGAACTTGGCCTTATGTGGGTACATCGACTCCATGGAGCTGTCCGGCAAT GATAAGGAGATGTACGTCTACGCGCTGAAGCTGTCCAAGTCGATCATACGGCGGAATAGG AAGGCGTCCATCGGGGTGGCGGGCAAATCGCAGAGCAGCTTGCCGAATGGCTTGACGGAC AAATCGCAGAGCAGCTTGCCAAATGGCTTGCCGGGCAATTTGACGAGCACCCTTCCTAAC GCCCTTCCGAGTGCCCTTCCGAGTGCCCTGCCCAGCAACTTACCCCCCTGCCTGACGAGC CCCTTGCCTCCCCTCCATTTCAACAAACCAAGCGACAACTATTGCAACCAGTTTTACAGC CCGTCTCCCATATATGTCATCCCGTACGCCCCCTACGCGAATGACTCCTGCATGGGCCAA AACGTCTTCTACGGAGAGAATACCTTTAACGGCCCCATGAAAAGCCTGCCTGATGAGGTG CAGAAGGGAGTTTTCCCGAACAGCCAATTCAGAACGGTTTATTCGATTAGCACCAATGAC AGCTTTTCAATGGCATGA
  • Download Fasta

  • Fasta :-

    MNIWLHTYTLDVPFFLKNVRHTGIEIFGSEYTFSMDGITTCKPKKSTIGQYCKSYELTFV KITYSQFSEILNALGKIYRPNTYNFVCKNCNHFCDDLFELLSGKRLFHTFMIYSRLGKLF GSFKNLALCGYIDSMELSGNDKEMYVYALKLSKSIIRRNRKASIGVAGKSQSSLPNGLTD KSQSSLPNGLPGNLTSTLPNALPSALPSALPSNLPPCLTSPLPPLHFNKPSDNYCNQFYS PSPIYVIPYAPYANDSCMGQNVFYGENTFNGPMKSLPDEVQKGVFPNSQFRTVYSISTND SFSMA

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India