PcyM_0721900 | OTU-like cysteine protease, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0721900OTHER0.9908230.0003600.008817
No Results

  • Fasta :-

    >PcyM_0721900 MGLCCSGKLSNVRYRYMASRLRVSESLERDEQIETKLSTSMNIKSLAHVLTDIQKLKRTE EMKRYSTFDRRISFLKRNSKINKRNYKSGRTILEKRLSAVDCELIKVPGDGNCLFRSISC NLFNEQRYHMYVRKRCVQHMLNCKDEFSIYFEEGAFYEYTEKMSQNGYWGDELCIKATAD AFDCVVYIITSTADNWHLKYESKHRTEGKHKKCVFLAYTSPVHYDSFRLTRA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0721900.fa Sequence name : PcyM_0721900 Sequence length : 232 VALUES OF COMPUTED PARAMETERS Coef20 : 4.514 CoefTot : 0.434 ChDiff : 13 ZoneTo : 24 KR : 5 DE : 0 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.506 1.529 0.103 0.474 MesoH : -1.411 -0.275 -0.594 0.066 MuHd_075 : 14.578 14.509 3.589 4.882 MuHd_095 : 20.929 14.845 5.984 4.085 MuHd_100 : 19.882 9.002 4.871 3.591 MuHd_105 : 15.751 5.725 3.803 2.510 Hmax_075 : 8.900 7.700 3.878 3.267 Hmax_095 : -0.700 5.163 -0.162 0.753 Hmax_100 : 9.300 4.200 0.562 2.740 Hmax_105 : -5.133 6.533 -1.387 2.707 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8636 0.1364 DFMC : 0.8534 0.1466
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 232 PcyM_0721900 MGLCCSGKLSNVRYRYMASRLRVSESLERDEQIETKLSTSMNIKSLAHVLTDIQKLKRTEEMKRYSTFDRRISFLKRNSK 80 INKRNYKSGRTILEKRLSAVDCELIKVPGDGNCLFRSISCNLFNEQRYHMYVRKRCVQHMLNCKDEFSIYFEEGAFYEYT 160 EKMSQNGYWGDELCIKATADAFDCVVYIITSTADNWHLKYESKHRTEGKHKKCVFLAYTSPVHYDSFRLTRA 240 ................................................................................ 80 ................................................................................ 160 ........................................................................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0721900 8 GLCCSGK|LS 0.067 . PcyM_0721900 13 GKLSNVR|YR 0.075 . PcyM_0721900 15 LSNVRYR|YM 0.119 . PcyM_0721900 20 YRYMASR|LR 0.070 . PcyM_0721900 22 YMASRLR|VS 0.082 . PcyM_0721900 29 VSESLER|DE 0.077 . PcyM_0721900 36 DEQIETK|LS 0.059 . PcyM_0721900 44 STSMNIK|SL 0.113 . PcyM_0721900 55 VLTDIQK|LK 0.060 . PcyM_0721900 57 TDIQKLK|RT 0.075 . PcyM_0721900 58 DIQKLKR|TE 0.162 . PcyM_0721900 63 KRTEEMK|RY 0.068 . PcyM_0721900 64 RTEEMKR|YS 0.154 . PcyM_0721900 70 RYSTFDR|RI 0.112 . PcyM_0721900 71 YSTFDRR|IS 0.114 . PcyM_0721900 76 RRISFLK|RN 0.072 . PcyM_0721900 77 RISFLKR|NS 0.193 . PcyM_0721900 80 FLKRNSK|IN 0.102 . PcyM_0721900 83 RNSKINK|RN 0.089 . PcyM_0721900 84 NSKINKR|NY 0.173 . PcyM_0721900 87 INKRNYK|SG 0.239 . PcyM_0721900 90 RNYKSGR|TI 0.125 . PcyM_0721900 95 GRTILEK|RL 0.073 . PcyM_0721900 96 RTILEKR|LS 0.107 . PcyM_0721900 106 VDCELIK|VP 0.063 . PcyM_0721900 116 DGNCLFR|SI 0.225 . PcyM_0721900 127 NLFNEQR|YH 0.086 . PcyM_0721900 133 RYHMYVR|KR 0.086 . PcyM_0721900 134 YHMYVRK|RC 0.082 . PcyM_0721900 135 HMYVRKR|CV 0.389 . PcyM_0721900 144 QHMLNCK|DE 0.067 . PcyM_0721900 162 FYEYTEK|MS 0.059 . PcyM_0721900 176 GDELCIK|AT 0.080 . PcyM_0721900 199 ADNWHLK|YE 0.088 . PcyM_0721900 203 HLKYESK|HR 0.067 . PcyM_0721900 205 KYESKHR|TE 0.102 . PcyM_0721900 209 KHRTEGK|HK 0.075 . PcyM_0721900 211 RTEGKHK|KC 0.058 . PcyM_0721900 212 TEGKHKK|CV 0.214 . PcyM_0721900 228 VHYDSFR|LT 0.098 . PcyM_0721900 231 DSFRLTR|A- 0.255 . ____________________________^_________________

  • Fasta :-

    >PcyM_0721900 ATGGGGCTCTGCTGCAGCGGGAAGCTGAGCAACGTGCGATACCGATACATGGCGAGTCGC CTGAGGGTCTCCGAGAGCCTCGAGAGAGACGAACAAATAGAAACAAAGCTGAGTACAAGC ATGAATATAAAAAGTTTAGCACATGTACTGACAGATATACAGAAGCTAAAACGGACGGAA GAAATGAAACGATACAGTACCTTTGACAGAAGAATTTCTTTTTTAAAAAGAAATAGCAAA ATAAATAAAAGAAATTACAAATCTGGACGAACAATTTTGGAAAAGAGACTCTCGGCAGTT GACTGTGAATTGATTAAAGTCCCAGGAGATGGTAACTGTCTATTTCGATCCATTTCTTGT AACTTATTTAATGAACAAAGGTATCATATGTATGTACGGAAAAGGTGTGTGCAGCACATG TTGAATTGTAAGGATGAGTTTTCCATTTATTTTGAAGAGGGTGCTTTTTATGAATACACA GAAAAAATGTCTCAGAATGGCTACTGGGGGGATGAGTTGTGTATAAAGGCCACAGCAGAT GCCTTTGACTGCGTTGTTTATATTATCACGTCTACTGCGGATAATTGGCATTTGAAATAT GAATCCAAGCATCGAACTGAGGGGAAGCACAAGAAGTGCGTGTTTCTCGCCTACACCAGC CCCGTGCACTACGACTCCTTTAGGCTCACTCGGGCGTGA
  • Download Fasta

  • Fasta :-

    MGLCCSGKLSNVRYRYMASRLRVSESLERDEQIETKLSTSMNIKSLAHVLTDIQKLKRTE EMKRYSTFDRRISFLKRNSKINKRNYKSGRTILEKRLSAVDCELIKVPGDGNCLFRSISC NLFNEQRYHMYVRKRCVQHMLNCKDEFSIYFEEGAFYEYTEKMSQNGYWGDELCIKATAD AFDCVVYIITSTADNWHLKYESKHRTEGKHKKCVFLAYTSPVHYDSFRLTRA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_072190066 SMKRYSTFDR0.997unspPcyM_072190066 SMKRYSTFDR0.997unspPcyM_072190066 SMKRYSTFDR0.997unspPcyM_072190079 SLKRNSKINK0.992unspPcyM_072190098 SEKRLSAVDC0.995unspPcyM_072190024 SRLRVSESLE0.99unspPcyM_072190026 SRVSESLERD0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India