PcyM_0733600 | M18 aspartyl aminopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0008270      

  • Computed_GO_Functions:  aminopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0733600OTHER0.9992470.0000450.000708
No Results

  • Fasta :-

    >PcyM_0733600 MEKKAREYAQGAVKFIQKSGSNFLACKNLREKLEEKGFKRIQEGEKWNLRKNEGYVFSKQ NRNICGFFIGKDFNIEKGSILISIGHIDSCCLKISPNNNTVKSKLNQLNVECYGSGLWHT WFDRSLGLSGQVVYKRDGKLVEKLIQINRSVLFLPSLAIHLQNRTRFEFSVKINYENHLK PILSTVLYDQLMKGKGKEKGERGTDTNALTEDAAHVGKTQDKRLDGDDSSPSCHSHQENP NSSPLLYTLAKELQCQENDILDFELCLMDVHEPCFTGAYEEFIEGARFDNLLGSYCVFEA FAEMTNTLKGGAPAAPLSSSVPPEAHANLYICIGYDHEEIGSLSEVGAQSYFTQNFIKRI LTAICSPQVAESTPSSTSAPPIDELYGSLMNRSLLLNVDMAHCSHPNYPETVQTDHQLFF HEGIAIKYNTNKNYVTSPYYTCLLKRTFELFASNFKEKIKYQNFMVKNDTPCGSTVGSMV ASNLSMPGIDIGIPQLAMHSIREIAAVRDVYYLVKGILAFYTYYSHVHASCVPDG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0733600.fa Sequence name : PcyM_0733600 Sequence length : 535 VALUES OF COMPUTED PARAMETERS Coef20 : 3.458 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.241 1.324 0.129 0.449 MesoH : -0.130 0.410 -0.236 0.272 MuHd_075 : 18.839 9.239 5.773 2.991 MuHd_095 : 51.098 29.719 14.711 10.485 MuHd_100 : 48.223 29.437 14.289 10.285 MuHd_105 : 34.757 23.274 11.019 7.846 Hmax_075 : -3.033 1.050 -4.168 0.852 Hmax_095 : 7.963 9.800 0.375 3.859 Hmax_100 : 14.300 13.300 1.949 5.360 Hmax_105 : 3.967 10.733 -0.284 4.340 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8743 0.1257 DFMC : 0.8652 0.1348
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 535 PcyM_0733600 MEKKAREYAQGAVKFIQKSGSNFLACKNLREKLEEKGFKRIQEGEKWNLRKNEGYVFSKQNRNICGFFIGKDFNIEKGSI 80 LISIGHIDSCCLKISPNNNTVKSKLNQLNVECYGSGLWHTWFDRSLGLSGQVVYKRDGKLVEKLIQINRSVLFLPSLAIH 160 LQNRTRFEFSVKINYENHLKPILSTVLYDQLMKGKGKEKGERGTDTNALTEDAAHVGKTQDKRLDGDDSSPSCHSHQENP 240 NSSPLLYTLAKELQCQENDILDFELCLMDVHEPCFTGAYEEFIEGARFDNLLGSYCVFEAFAEMTNTLKGGAPAAPLSSS 320 VPPEAHANLYICIGYDHEEIGSLSEVGAQSYFTQNFIKRILTAICSPQVAESTPSSTSAPPIDELYGSLMNRSLLLNVDM 400 AHCSHPNYPETVQTDHQLFFHEGIAIKYNTNKNYVTSPYYTCLLKRTFELFASNFKEKIKYQNFMVKNDTPCGSTVGSMV 480 ASNLSMPGIDIGIPQLAMHSIREIAAVRDVYYLVKGILAFYTYYSHVHASCVPDG 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0733600 3 ----MEK|KA 0.065 . PcyM_0733600 4 ---MEKK|AR 0.116 . PcyM_0733600 6 -MEKKAR|EY 0.120 . PcyM_0733600 14 YAQGAVK|FI 0.075 . PcyM_0733600 18 AVKFIQK|SG 0.079 . PcyM_0733600 27 SNFLACK|NL 0.067 . PcyM_0733600 30 LACKNLR|EK 0.074 . PcyM_0733600 32 CKNLREK|LE 0.069 . PcyM_0733600 36 REKLEEK|GF 0.068 . PcyM_0733600 39 LEEKGFK|RI 0.076 . PcyM_0733600 40 EEKGFKR|IQ 0.183 . PcyM_0733600 46 RIQEGEK|WN 0.061 . PcyM_0733600 50 GEKWNLR|KN 0.091 . PcyM_0733600 51 EKWNLRK|NE 0.096 . PcyM_0733600 59 EGYVFSK|QN 0.065 . PcyM_0733600 62 VFSKQNR|NI 0.123 . PcyM_0733600 71 CGFFIGK|DF 0.068 . PcyM_0733600 77 KDFNIEK|GS 0.061 . PcyM_0733600 93 IDSCCLK|IS 0.060 . PcyM_0733600 102 PNNNTVK|SK 0.094 . PcyM_0733600 104 NNTVKSK|LN 0.063 . PcyM_0733600 124 WHTWFDR|SL 0.156 . PcyM_0733600 135 SGQVVYK|RD 0.074 . PcyM_0733600 136 GQVVYKR|DG 0.216 . PcyM_0733600 139 VYKRDGK|LV 0.157 . PcyM_0733600 143 DGKLVEK|LI 0.062 . PcyM_0733600 149 KLIQINR|SV 0.122 . PcyM_0733600 164 AIHLQNR|TR 0.073 . PcyM_0733600 166 HLQNRTR|FE 0.103 . PcyM_0733600 172 RFEFSVK|IN 0.059 . PcyM_0733600 180 NYENHLK|PI 0.056 . PcyM_0733600 193 LYDQLMK|GK 0.065 . PcyM_0733600 195 DQLMKGK|GK 0.089 . PcyM_0733600 197 LMKGKGK|EK 0.075 . PcyM_0733600 199 KGKGKEK|GE 0.064 . PcyM_0733600 202 GKEKGER|GT 0.119 . PcyM_0733600 218 DAAHVGK|TQ 0.072 . PcyM_0733600 222 VGKTQDK|RL 0.063 . PcyM_0733600 223 GKTQDKR|LD 0.140 . PcyM_0733600 251 LLYTLAK|EL 0.074 . PcyM_0733600 287 EFIEGAR|FD 0.069 . PcyM_0733600 309 EMTNTLK|GG 0.059 . PcyM_0733600 358 FTQNFIK|RI 0.068 . PcyM_0733600 359 TQNFIKR|IL 0.226 . PcyM_0733600 392 YGSLMNR|SL 0.130 . PcyM_0733600 427 HEGIAIK|YN 0.064 . PcyM_0733600 432 IKYNTNK|NY 0.065 . PcyM_0733600 445 YYTCLLK|RT 0.054 . PcyM_0733600 446 YTCLLKR|TF 0.128 . PcyM_0733600 456 LFASNFK|EK 0.061 . PcyM_0733600 458 ASNFKEK|IK 0.087 . PcyM_0733600 460 NFKEKIK|YQ 0.066 . PcyM_0733600 467 YQNFMVK|ND 0.076 . PcyM_0733600 502 LAMHSIR|EI 0.138 . PcyM_0733600 508 REIAAVR|DV 0.127 . PcyM_0733600 515 DVYYLVK|GI 0.062 . ____________________________^_________________

  • Fasta :-

    >PcyM_0733600 ATGGAAAAGAAGGCGCGCGAGTACGCTCAAGGAGCGGTGAAGTTCATACAAAAGAGCGGG AGCAATTTCCTTGCATGTAAAAACCTGCGAGAGAAATTAGAAGAAAAAGGATTCAAGAGA ATACAAGAAGGAGAAAAATGGAACCTACGAAAAAACGAAGGATATGTATTCAGTAAGCAG AACAGAAATATATGCGGATTCTTTATTGGGAAGGACTTTAACATAGAGAAGGGTTCTATC CTTATTTCAATTGGTCATATAGACTCCTGCTGTTTGAAAATATCTCCAAATAATAACACC GTTAAGAGTAAGTTGAACCAATTAAACGTAGAATGCTACGGGTCAGGGTTGTGGCACACA TGGTTCGATCGTAGCTTAGGCTTGTCTGGTCAGGTAGTCTACAAGAGAGATGGCAAGCTT GTGGAGAAACTAATCCAAATTAACAGATCCGTGTTGTTCCTTCCTAGTCTTGCTATTCAC TTGCAAAACAGGACGAGGTTTGAATTTTCAGTAAAAATTAATTATGAGAATCATTTGAAG CCTATCCTATCCACTGTTTTGTATGATCAGCTGATGAAAGGGAAAGGGAAGGAGAAAGGG GAGAGGGGCACAGATACAAATGCCCTTACGGAAGACGCTGCGCATGTGGGGAAAACACAG GATAAGCGCCTGGACGGAGATGACTCCTCCCCTAGCTGCCACTCCCATCAGGAAAATCCC AACTCATCCCCACTCCTCTACACACTAGCAAAAGAGTTGCAGTGCCAAGAAAATGACATC CTTGATTTCGAACTGTGCTTAATGGATGTACATGAGCCTTGCTTCACTGGGGCCTACGAA GAGTTCATCGAAGGGGCGAGATTTGATAATCTGTTAGGTTCTTATTGCGTCTTTGAGGCG TTCGCGGAGATGACAAACACACTAAAGGGGGGAGCGCCAGCAGCACCGCTCTCCTCCTCT GTCCCCCCCGAGGCACACGCAAACCTGTACATCTGCATCGGTTACGACCACGAAGAAATA GGTTCCCTGAGCGAAGTCGGCGCGCAGTCTTACTTTACGCAAAATTTTATTAAGCGAATT TTAACTGCCATTTGTTCTCCCCAGGTAGCAGAGAGTACACCCTCATCCACTTCTGCTCCT CCCATCGATGAGTTGTATGGAAGTCTCATGAACAGGTCTCTCCTGCTCAACGTCGACATG GCACACTGTAGTCACCCCAACTACCCAGAAACGGTACAGACAGACCATCAGTTATTCTTC CACGAAGGAATTGCTATCAAATACAACACGAATAAAAATTACGTCACTTCGCCCTACTAC ACATGCTTACTTAAGAGGACCTTCGAGCTATTTGCTTCCAATTTTAAGGAGAAAATAAAA TATCAAAATTTTATGGTGAAGAATGATACCCCTTGTGGTAGTACTGTGGGTTCTATGGTT GCATCGAACCTTTCCATGCCAGGTATTGACATTGGCATTCCACAGCTAGCCATGCATTCG ATAAGGGAGATAGCCGCTGTGCGGGACGTCTACTACTTGGTCAAGGGGATCTTGGCCTTC TACACCTACTACAGTCACGTGCACGCCTCCTGCGTGCCCGATGGGTAG
  • Download Fasta

  • Fasta :-

    MEKKAREYAQGAVKFIQKSGSNFLACKNLREKLEEKGFKRIQEGEKWNLRKNEGYVFSKQ NRNICGFFIGKDFNIEKGSILISIGHIDSCCLKISPNNNTVKSKLNQLNVECYGSGLWHT WFDRSLGLSGQVVYKRDGKLVEKLIQINRSVLFLPSLAIHLQNRTRFEFSVKINYENHLK PILSTVLYDQLMKGKGKEKGERGTDTNALTEDAAHVGKTQDKRLDGDDSSPSCHSHQENP NSSPLLYTLAKELQCQENDILDFELCLMDVHEPCFTGAYEEFIEGARFDNLLGSYCVFEA FAEMTNTLKGGAPAAPLSSSVPPEAHANLYICIGYDHEEIGSLSEVGAQSYFTQNFIKRI LTAICSPQVAESTPSSTSAPPIDELYGSLMNRSLLLNVDMAHCSHPNYPETVQTDHQLFF HEGIAIKYNTNKNYVTSPYYTCLLKRTFELFASNFKEKIKYQNFMVKNDTPCGSTVGSMV ASNLSMPGIDIGIPQLAMHSIREIAAVRDVYYLVKGILAFYTYYSHVHASCVPDG

  • title: metal binding site
  • coordinates: H86,D289,E338,E339,D399,H499
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India