PcyM_0806400 | PPPDE peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0806400OTHER0.9999530.0000130.000034
No Results

  • Fasta :-

    >PcyM_0806400 MKKKNRAKGRECTKKDDKNDVSGNYETQGSQEIPQPDVNSSMVYLNIYDLDAISKVVNTV ARSMGAGAFHAGVEVYGYEYSFGYIVDGETGVTKTSARYHPYHVYRESIPMEEVDLLVEV MKLQWIGDTYDILSRNCLNYADYFCNLLDVGSIPEWVMSLQKKVTWVKSNINVAASKLKE LNKAAGIPTVINFIKKKYNDNGDDYEGCKVIVKS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0806400.fa Sequence name : PcyM_0806400 Sequence length : 214 VALUES OF COMPUTED PARAMETERS Coef20 : 3.203 CoefTot : -0.425 ChDiff : -1 ZoneTo : 10 KR : 6 DE : 0 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.441 0.971 -0.085 0.451 MesoH : -0.701 0.210 -0.414 0.196 MuHd_075 : 7.580 5.145 2.187 1.886 MuHd_095 : 32.589 12.990 9.283 6.458 MuHd_100 : 26.389 9.849 7.624 4.901 MuHd_105 : 14.388 4.320 5.703 2.244 Hmax_075 : -30.800 -11.112 -9.261 -4.366 Hmax_095 : -21.000 -9.712 -6.625 -2.380 Hmax_100 : -15.200 -7.600 -5.268 -1.820 Hmax_105 : -24.800 -11.200 -7.192 -3.870 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8848 0.1152 DFMC : 0.7819 0.2181
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 214 PcyM_0806400 MKKKNRAKGRECTKKDDKNDVSGNYETQGSQEIPQPDVNSSMVYLNIYDLDAISKVVNTVARSMGAGAFHAGVEVYGYEY 80 SFGYIVDGETGVTKTSARYHPYHVYRESIPMEEVDLLVEVMKLQWIGDTYDILSRNCLNYADYFCNLLDVGSIPEWVMSL 160 QKKVTWVKSNINVAASKLKELNKAAGIPTVINFIKKKYNDNGDDYEGCKVIVKS 240 ................................................................................ 80 ................................................................................ 160 ...................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0806400 2 -----MK|KK 0.063 . PcyM_0806400 3 ----MKK|KN 0.112 . PcyM_0806400 4 ---MKKK|NR 0.121 . PcyM_0806400 6 -MKKKNR|AK 0.118 . PcyM_0806400 8 KKKNRAK|GR 0.073 . PcyM_0806400 10 KNRAKGR|EC 0.141 . PcyM_0806400 14 KGRECTK|KD 0.064 . PcyM_0806400 15 GRECTKK|DD 0.136 . PcyM_0806400 18 CTKKDDK|ND 0.054 . PcyM_0806400 55 DLDAISK|VV 0.070 . PcyM_0806400 62 VVNTVAR|SM 0.300 . PcyM_0806400 94 GETGVTK|TS 0.060 . PcyM_0806400 98 VTKTSAR|YH 0.087 . PcyM_0806400 106 HPYHVYR|ES 0.146 . PcyM_0806400 122 LLVEVMK|LQ 0.066 . PcyM_0806400 135 TYDILSR|NC 0.069 . PcyM_0806400 162 WVMSLQK|KV 0.070 . PcyM_0806400 163 VMSLQKK|VT 0.119 . PcyM_0806400 168 KKVTWVK|SN 0.080 . PcyM_0806400 177 INVAASK|LK 0.059 . PcyM_0806400 179 VAASKLK|EL 0.070 . PcyM_0806400 183 KLKELNK|AA 0.074 . PcyM_0806400 195 TVINFIK|KK 0.065 . PcyM_0806400 196 VINFIKK|KY 0.120 . PcyM_0806400 197 INFIKKK|YN 0.180 . PcyM_0806400 209 DDYEGCK|VI 0.060 . PcyM_0806400 213 GCKVIVK|S- 0.077 . ____________________________^_________________

  • Fasta :-

    >PcyM_0806400 ATGAAGAAAAAAAATCGCGCCAAGGGAAGAGAATGCACAAAGAAAGATGACAAAAATGAC GTGTCTGGGAATTACGAAACGCAGGGTTCTCAAGAAATACCCCAGCCCGACGTCAATTCC AGCATGGTCTACTTAAATATATATGACTTGGATGCCATTTCCAAGGTTGTCAACACGGTG GCCAGATCAATGGGCGCAGGTGCCTTTCACGCAGGCGTAGAGGTCTACGGGTATGAATAT TCATTCGGTTACATAGTAGACGGAGAAACGGGGGTGACCAAAACGAGCGCCCGCTACCAT CCCTACCACGTGTATCGTGAAAGCATCCCTATGGAAGAAGTAGACCTTTTGGTTGAGGTG ATGAAACTGCAGTGGATCGGAGATACGTACGACATATTGTCAAGGAATTGCCTCAACTAT GCCGACTATTTCTGCAATTTGCTGGATGTCGGCAGCATCCCCGAATGGGTCATGAGTTTA CAAAAGAAAGTAACATGGGTAAAGTCAAACATAAATGTCGCTGCGTCAAAGTTGAAAGAA TTAAACAAAGCTGCTGGAATACCAACCGTGATAAATTTCATAAAGAAAAAGTACAACGAC AATGGTGACGACTACGAAGGATGTAAAGTGATTGTAAAATCGTAG
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  • Fasta :-

    MKKKNRAKGRECTKKDDKNDVSGNYETQGSQEIPQPDVNSSMVYLNIYDLDAISKVVNTV ARSMGAGAFHAGVEVYGYEYSFGYIVDGETGVTKTSARYHPYHVYRESIPMEEVDLLVEV MKLQWIGDTYDILSRNCLNYADYFCNLLDVGSIPEWVMSLQKKVTWVKSNINVAASKLKE LNKAAGIPTVINFIKKKYNDNGDDYEGCKVIVKS

    No Results
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IDSitePeptideScoreMethod
PcyM_080640013 TGRECTKKDD0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India