PcyM_0809500 | metallopeptidase, putative

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0809500OTHER0.9999210.0000230.000056
No Results

  • Fasta :-

    >PcyM_0809500 MNIKNIDDVKYRIHKIKVLNENDKKAKAVLTRAADQVMPIMRKMRFSVELLSEFLPRSPN LLGLNIATKSEIKIRMRKKRGGELFHFNDIMGTLLHELAHIVHSGHDRSFYELLDKLVLE YNKLYTFGKIENQISGGKKTGGSDFRICNGSPKLMAAQAAEMRLLNNFMNKDGEILNVSL GSCLTQEQYDNLFKNRKERDDKICSISNDIIVIDPSMDLTNHDHGENGETSQNRKNDFKR SNSLQRRNKNVFIFNADCIKEEKQTDALAQDVCKKSFKTPEGSDCVHILKVKRDCSGVKH PENENGSTVSDNVGIRKGKKRKVIILD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0809500.fa Sequence name : PcyM_0809500 Sequence length : 327 VALUES OF COMPUTED PARAMETERS Coef20 : 3.617 CoefTot : -0.381 ChDiff : 13 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.341 0.994 -0.092 0.403 MesoH : -1.235 -0.007 -0.586 0.089 MuHd_075 : 11.418 5.010 0.551 0.901 MuHd_095 : 19.968 12.204 3.883 4.296 MuHd_100 : 21.996 16.540 6.441 5.058 MuHd_105 : 25.505 22.038 9.258 6.030 Hmax_075 : -9.600 6.800 -4.104 2.200 Hmax_095 : -2.712 7.612 -2.802 2.520 Hmax_100 : -6.500 6.800 -3.091 2.240 Hmax_105 : 11.900 21.817 3.053 6.907 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9525 0.0475 DFMC : 0.9754 0.0246
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 327 PcyM_0809500 MNIKNIDDVKYRIHKIKVLNENDKKAKAVLTRAADQVMPIMRKMRFSVELLSEFLPRSPNLLGLNIATKSEIKIRMRKKR 80 GGELFHFNDIMGTLLHELAHIVHSGHDRSFYELLDKLVLEYNKLYTFGKIENQISGGKKTGGSDFRICNGSPKLMAAQAA 160 EMRLLNNFMNKDGEILNVSLGSCLTQEQYDNLFKNRKERDDKICSISNDIIVIDPSMDLTNHDHGENGETSQNRKNDFKR 240 SNSLQRRNKNVFIFNADCIKEEKQTDALAQDVCKKSFKTPEGSDCVHILKVKRDCSGVKHPENENGSTVSDNVGIRKGKK 320 RKVIILD 400 ...............................................................................P 80 ................................................................................ 160 ...............................................................................P 240 ................................................................................ 320 ....... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ PcyM_0809500 4 ---MNIK|NI 0.067 . PcyM_0809500 10 KNIDDVK|YR 0.067 . PcyM_0809500 12 IDDVKYR|IH 0.089 . PcyM_0809500 15 VKYRIHK|IK 0.103 . PcyM_0809500 17 YRIHKIK|VL 0.077 . PcyM_0809500 24 VLNENDK|KA 0.076 . PcyM_0809500 25 LNENDKK|AK 0.081 . PcyM_0809500 27 ENDKKAK|AV 0.081 . PcyM_0809500 32 AKAVLTR|AA 0.209 . PcyM_0809500 42 QVMPIMR|KM 0.085 . PcyM_0809500 43 VMPIMRK|MR 0.074 . PcyM_0809500 45 PIMRKMR|FS 0.385 . PcyM_0809500 57 LSEFLPR|SP 0.115 . PcyM_0809500 69 GLNIATK|SE 0.091 . PcyM_0809500 73 ATKSEIK|IR 0.056 . PcyM_0809500 75 KSEIKIR|MR 0.107 . PcyM_0809500 77 EIKIRMR|KK 0.098 . PcyM_0809500 78 IKIRMRK|KR 0.327 . PcyM_0809500 79 KIRMRKK|RG 0.121 . PcyM_0809500 80 IRMRKKR|GG 0.755 *ProP* PcyM_0809500 108 VHSGHDR|SF 0.168 . PcyM_0809500 116 FYELLDK|LV 0.060 . PcyM_0809500 123 LVLEYNK|LY 0.052 . PcyM_0809500 129 KLYTFGK|IE 0.069 . PcyM_0809500 138 NQISGGK|KT 0.064 . PcyM_0809500 139 QISGGKK|TG 0.111 . PcyM_0809500 146 TGGSDFR|IC 0.094 . PcyM_0809500 153 ICNGSPK|LM 0.069 . PcyM_0809500 163 AQAAEMR|LL 0.080 . PcyM_0809500 171 LNNFMNK|DG 0.083 . PcyM_0809500 194 QYDNLFK|NR 0.052 . PcyM_0809500 196 DNLFKNR|KE 0.085 . PcyM_0809500 197 NLFKNRK|ER 0.088 . PcyM_0809500 199 FKNRKER|DD 0.359 . PcyM_0809500 202 RKERDDK|IC 0.161 . PcyM_0809500 234 GETSQNR|KN 0.094 . PcyM_0809500 235 ETSQNRK|ND 0.079 . PcyM_0809500 239 NRKNDFK|RS 0.062 . PcyM_0809500 240 RKNDFKR|SN 0.548 *ProP* PcyM_0809500 246 RSNSLQR|RN 0.091 . PcyM_0809500 247 SNSLQRR|NK 0.162 . PcyM_0809500 249 SLQRRNK|NV 0.195 . PcyM_0809500 260 FNADCIK|EE 0.057 . PcyM_0809500 263 DCIKEEK|QT 0.065 . PcyM_0809500 274 LAQDVCK|KS 0.070 . PcyM_0809500 275 AQDVCKK|SF 0.148 . PcyM_0809500 278 VCKKSFK|TP 0.068 . PcyM_0809500 290 DCVHILK|VK 0.056 . PcyM_0809500 292 VHILKVK|RD 0.061 . PcyM_0809500 293 HILKVKR|DC 0.285 . PcyM_0809500 299 RDCSGVK|HP 0.066 . PcyM_0809500 316 SDNVGIR|KG 0.078 . PcyM_0809500 317 DNVGIRK|GK 0.078 . PcyM_0809500 319 VGIRKGK|KR 0.117 . PcyM_0809500 320 GIRKGKK|RK 0.096 . PcyM_0809500 321 IRKGKKR|KV 0.365 . PcyM_0809500 322 RKGKKRK|VI 0.094 . ____________________________^_________________

  • Fasta :-

    >PcyM_0809500 ATGAACATTAAAAACATAGATGATGTAAAATACAGAATTCACAAAATTAAAGTTTTAAAC GAAAATGATAAGAAGGCAAAAGCAGTGTTGACCCGGGCTGCCGACCAGGTGATGCCAATT ATGAGGAAGATGCGCTTTTCGGTTGAATTACTGTCAGAGTTTTTACCTCGGAGTCCCAAT TTGCTAGGGCTGAACATTGCAACTAAATCGGAAATTAAGATACGGATGCGGAAAAAAAGG GGAGGGGAATTATTTCACTTCAACGACATCATGGGGACTCTGTTGCACGAGCTGGCGCAT ATAGTGCACAGTGGACATGACAGATCATTTTACGAACTATTGGACAAACTAGTGTTAGAG TATAATAAATTATACACTTTTGGAAAAATAGAAAATCAAATCAGTGGAGGGAAAAAAACA GGAGGAAGTGATTTCCGTATATGTAATGGTAGCCCCAAATTAATGGCAGCACAGGCTGCT GAAATGAGACTACTAAATAATTTTATGAACAAGGATGGGGAAATATTAAATGTATCCCTT GGAAGTTGCTTAACACAAGAACAGTATGATAATTTATTTAAAAATCGAAAAGAACGTGAT GATAAAATTTGTTCCATTTCGAATGATATAATTGTGATCGATCCGTCTATGGATTTGACC AACCATGACCATGGTGAAAATGGGGAAACCTCACAGAACAGAAAAAATGATTTTAAACGA TCAAATTCGTTGCAAAGAAGGAATAAAAATGTCTTCATTTTTAATGCGGATTGTATAAAG GAGGAGAAACAGACAGATGCGCTTGCGCAGGATGTGTGTAAGAAATCATTCAAGACACCA GAAGGAAGCGACTGCGTGCATATTTTAAAGGTTAAACGAGATTGCAGCGGTGTGAAACAT CCTGAAAATGAAAATGGATCGACCGTTTCGGATAATGTGGGTATCAGGAAGGGCAAAAAG AGAAAAGTTATTATTCTCGATTAG
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  • Fasta :-

    MNIKNIDDVKYRIHKIKVLNENDKKAKAVLTRAADQVMPIMRKMRFSVELLSEFLPRSPN LLGLNIATKSEIKIRMRKKRGGELFHFNDIMGTLLHELAHIVHSGHDRSFYELLDKLVLE YNKLYTFGKIENQISGGKKTGGSDFRICNGSPKLMAAQAAEMRLLNNFMNKDGEILNVSL GSCLTQEQYDNLFKNRKERDDKICSISNDIIVIDPSMDLTNHDHGENGETSQNRKNDFKR SNSLQRRNKNVFIFNADCIKEEKQTDALAQDVCKKSFKTPEGSDCVHILKVKRDCSGVKH PENENGSTVSDNVGIRKGKKRKVIILD

    No Results
  • title: Zn binding site
  • coordinates: H96,H100,H106
No Results
No Results
IDSitePeptideScoreMethod
PcyM_080950047 SKMRFSVELL0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India