PcyM_0824100 | proteasome regulatory protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0824100OTHER0.9999850.0000010.000014
No Results

  • Fasta :-

    >PcyM_0824100 MNLDEFNALVKQRDEIEREIKENVDFLEAPENKSVGMKGKLVDEEGFPRNDIDIYSIRVA RNKVICLKNDYLNVNKKIEEYLHKVHNSHPVIRVQRSKAKDEQGNDPNESSPESVTEDYD ESAPDYEKLIEEARRSTFAMIDEMVENSPSHKAGLRINDYIIQFGDIRKKKSEKKKSDKN EKENDNERESEKDHEDIFKRIAAYMSNNPTRIKVKILREGKIFFYFVFPSKTANGLYIGC HLTPTRGVVV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0824100.fa Sequence name : PcyM_0824100 Sequence length : 250 VALUES OF COMPUTED PARAMETERS Coef20 : 3.515 CoefTot : -0.012 ChDiff : -4 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.918 0.971 -0.025 0.531 MesoH : -2.222 -0.471 -0.825 -0.076 MuHd_075 : 24.443 10.237 3.724 5.336 MuHd_095 : 15.951 8.207 3.783 3.140 MuHd_100 : 25.679 14.708 6.505 4.974 MuHd_105 : 34.463 21.151 9.619 6.571 Hmax_075 : -14.400 -0.700 -6.371 0.653 Hmax_095 : -10.600 1.500 -4.562 1.270 Hmax_100 : -6.200 3.800 -4.247 1.430 Hmax_105 : -2.100 11.100 -1.372 2.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9089 0.0911 DFMC : 0.8991 0.1009
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 250 PcyM_0824100 MNLDEFNALVKQRDEIEREIKENVDFLEAPENKSVGMKGKLVDEEGFPRNDIDIYSIRVARNKVICLKNDYLNVNKKIEE 80 YLHKVHNSHPVIRVQRSKAKDEQGNDPNESSPESVTEDYDESAPDYEKLIEEARRSTFAMIDEMVENSPSHKAGLRINDY 160 IIQFGDIRKKKSEKKKSDKNEKENDNERESEKDHEDIFKRIAAYMSNNPTRIKVKILREGKIFFYFVFPSKTANGLYIGC 240 HLTPTRGVVV 320 ................................................................................ 80 ................................................................................ 160 ..........P..................................................................... 240 .......... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_0824100 11 EFNALVK|QR 0.069 . PcyM_0824100 13 NALVKQR|DE 0.113 . PcyM_0824100 18 QRDEIER|EI 0.095 . PcyM_0824100 21 EIEREIK|EN 0.109 . PcyM_0824100 33 LEAPENK|SV 0.161 . PcyM_0824100 38 NKSVGMK|GK 0.081 . PcyM_0824100 40 SVGMKGK|LV 0.109 . PcyM_0824100 49 DEEGFPR|ND 0.080 . PcyM_0824100 58 IDIYSIR|VA 0.100 . PcyM_0824100 61 YSIRVAR|NK 0.255 . PcyM_0824100 63 IRVARNK|VI 0.068 . PcyM_0824100 68 NKVICLK|ND 0.057 . PcyM_0824100 76 DYLNVNK|KI 0.066 . PcyM_0824100 77 YLNVNKK|IE 0.099 . PcyM_0824100 84 IEEYLHK|VH 0.057 . PcyM_0824100 93 NSHPVIR|VQ 0.095 . PcyM_0824100 96 PVIRVQR|SK 0.416 . PcyM_0824100 98 IRVQRSK|AK 0.087 . PcyM_0824100 100 VQRSKAK|DE 0.083 . PcyM_0824100 128 SAPDYEK|LI 0.067 . PcyM_0824100 134 KLIEEAR|RS 0.083 . PcyM_0824100 135 LIEEARR|ST 0.287 . PcyM_0824100 152 ENSPSHK|AG 0.073 . PcyM_0824100 156 SHKAGLR|IN 0.088 . PcyM_0824100 168 IQFGDIR|KK 0.068 . PcyM_0824100 169 QFGDIRK|KK 0.078 . PcyM_0824100 170 FGDIRKK|KS 0.093 . PcyM_0824100 171 GDIRKKK|SE 0.533 *ProP* PcyM_0824100 174 RKKKSEK|KK 0.076 . PcyM_0824100 175 KKKSEKK|KS 0.144 . PcyM_0824100 176 KKSEKKK|SD 0.233 . PcyM_0824100 179 EKKKSDK|NE 0.060 . PcyM_0824100 182 KSDKNEK|EN 0.069 . PcyM_0824100 188 KENDNER|ES 0.091 . PcyM_0824100 192 NERESEK|DH 0.091 . PcyM_0824100 199 DHEDIFK|RI 0.065 . PcyM_0824100 200 HEDIFKR|IA 0.164 . PcyM_0824100 211 MSNNPTR|IK 0.151 . PcyM_0824100 213 NNPTRIK|VK 0.055 . PcyM_0824100 215 PTRIKVK|IL 0.073 . PcyM_0824100 218 IKVKILR|EG 0.074 . PcyM_0824100 221 KILREGK|IF 0.090 . PcyM_0824100 231 YFVFPSK|TA 0.060 . PcyM_0824100 246 CHLTPTR|GV 0.103 . ____________________________^_________________

  • Fasta :-

    >PcyM_0824100 ATGAACCTGGACGAGTTCAACGCGCTGGTGAAGCAGAGAGACGAAATCGAGCGGGAGATC AAAGAGAACGTAGACTTCCTGGAGGCCCCCGAAAACAAAAGTGTGGGCATGAAGGGCAAG CTGGTAGATGAAGAAGGGTTCCCCAGAAATGACATTGACATATATAGCATCCGAGTTGCA AGGAACAAAGTCATATGCTTAAAAAATGATTACCTAAATGTGAACAAAAAAATCGAAGAG TACCTTCACAAGGTTCACAATTCCCACCCCGTCATACGAGTACAGAGAAGTAAGGCAAAG GACGAACAAGGAAATGACCCAAATGAATCATCTCCAGAAAGTGTCACAGAAGATTATGAT GAGTCAGCACCTGATTATGAAAAGCTAATCGAAGAAGCCAGAAGAAGTACCTTTGCCATG ATCGATGAGATGGTGGAAAATTCTCCTTCACATAAGGCAGGACTACGCATCAATGATTAT ATAATTCAGTTTGGTGATATACGAAAAAAAAAAAGTGAAAAAAAAAAAAGTGATAAAAAT GAAAAGGAGAATGATAATGAACGGGAAAGTGAAAAGGACCATGAGGATATCTTCAAGAGA ATTGCAGCTTACATGAGTAACAACCCCACCAGAATTAAAGTCAAAATTTTGAGAGAGGGG AAAATTTTTTTTTATTTTGTTTTTCCCAGTAAGACAGCCAATGGGTTATACATTGGCTGT CACCTGACACCAACCAGGGGGGTAGTAGTGTAG
  • Download Fasta

  • Fasta :-

    MNLDEFNALVKQRDEIEREIKENVDFLEAPENKSVGMKGKLVDEEGFPRNDIDIYSIRVA RNKVICLKNDYLNVNKKIEEYLHKVHNSHPVIRVQRSKAKDEQGNDPNESSPESVTEDYD ESAPDYEKLIEEARRSTFAMIDEMVENSPSHKAGLRINDYIIQFGDIRKKKSEKKKSDKN EKENDNERESEKDHEDIFKRIAAYMSNNPTRIKVKILREGKIFFYFVFPSKTANGLYIGC HLTPTRGVVV

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0824100177 SEKKKSDKNE0.997unspPcyM_0824100177 SEKKKSDKNE0.997unspPcyM_0824100177 SEKKKSDKNE0.997unspPcyM_0824100190 SNERESEKDH0.998unspPcyM_0824100114 SSSPESVTED0.996unspPcyM_0824100172 SRKKKSEKKK0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India