PcyM_0824900 | proteasome subunit alpha type-3, putative

_IDPredictionOTHERSPmTPCS_Position
PcyM_0824900OTHER0.9995860.0003530.000061
No Results

  • Fasta :-

    >PcyM_0824900 MAGLSAGYDLSVSTFSPDGRLYQVEYIYKAINNNNTALSLECRDGLLTCCVNSNILKNKM IKQNSYNRIYHVNNNVIVTYAGLDGDARNIIDRAKYEANSYYLNFHTNIPLHILANRVSL YIHSFTLYWHLRPFASSIILASFDEKEKGEIYCVEPNGACYKYAGVVIGKNKEIFKTEIE KKNYKEIDVKEALVDIYKIILTSDDHMNKNNLPHLVNFSWICKDSSYEYQSVDSETLNEA MRLAVESVEQLNQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0824900.fa Sequence name : PcyM_0824900 Sequence length : 253 VALUES OF COMPUTED PARAMETERS Coef20 : 3.707 CoefTot : -0.141 ChDiff : -4 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.824 0.929 -0.019 0.448 MesoH : -0.668 0.181 -0.421 0.216 MuHd_075 : 23.497 12.390 4.947 3.001 MuHd_095 : 9.262 6.029 2.442 2.046 MuHd_100 : 4.187 5.142 0.585 1.413 MuHd_105 : 5.257 2.255 1.425 0.842 Hmax_075 : 15.517 10.267 1.459 3.885 Hmax_095 : 13.000 9.800 1.586 4.440 Hmax_100 : 13.000 9.800 1.283 3.940 Hmax_105 : 10.033 5.250 1.204 3.768 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9067 0.0933 DFMC : 0.8501 0.1499
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 253 PcyM_0824900 MAGLSAGYDLSVSTFSPDGRLYQVEYIYKAINNNNTALSLECRDGLLTCCVNSNILKNKMIKQNSYNRIYHVNNNVIVTY 80 AGLDGDARNIIDRAKYEANSYYLNFHTNIPLHILANRVSLYIHSFTLYWHLRPFASSIILASFDEKEKGEIYCVEPNGAC 160 YKYAGVVIGKNKEIFKTEIEKKNYKEIDVKEALVDIYKIILTSDDHMNKNNLPHLVNFSWICKDSSYEYQSVDSETLNEA 240 MRLAVESVEQLNQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0824900 20 TFSPDGR|LY 0.091 . PcyM_0824900 29 QVEYIYK|AI 0.063 . PcyM_0824900 43 ALSLECR|DG 0.079 . PcyM_0824900 57 VNSNILK|NK 0.069 . PcyM_0824900 59 SNILKNK|MI 0.076 . PcyM_0824900 62 LKNKMIK|QN 0.077 . PcyM_0824900 68 KQNSYNR|IY 0.089 . PcyM_0824900 88 GLDGDAR|NI 0.084 . PcyM_0824900 93 ARNIIDR|AK 0.108 . PcyM_0824900 95 NIIDRAK|YE 0.062 . PcyM_0824900 117 LHILANR|VS 0.070 . PcyM_0824900 132 TLYWHLR|PF 0.097 . PcyM_0824900 146 LASFDEK|EK 0.083 . PcyM_0824900 148 SFDEKEK|GE 0.057 . PcyM_0824900 162 PNGACYK|YA 0.095 . PcyM_0824900 170 AGVVIGK|NK 0.061 . PcyM_0824900 172 VVIGKNK|EI 0.073 . PcyM_0824900 176 KNKEIFK|TE 0.060 . PcyM_0824900 181 FKTEIEK|KN 0.062 . PcyM_0824900 182 KTEIEKK|NY 0.096 . PcyM_0824900 185 IEKKNYK|EI 0.075 . PcyM_0824900 190 YKEIDVK|EA 0.060 . PcyM_0824900 198 ALVDIYK|II 0.066 . PcyM_0824900 209 SDDHMNK|NN 0.062 . PcyM_0824900 223 NFSWICK|DS 0.083 . PcyM_0824900 242 TLNEAMR|LA 0.108 . ____________________________^_________________

  • Fasta :-

    >PcyM_0824900 ATGGCAGGTCTCAGTGCAGGCTACGACCTATCCGTTTCGACCTTCTCCCCTGACGGGAGG CTCTACCAAGTAGAATACATATATAAGGCAATCAACAATAACAACACAGCCCTGAGTCTG GAGTGTCGAGATGGATTACTCACCTGTTGCGTCAATTCAAATATACTGAAGAATAAAATG ATAAAGCAGAATAGCTACAATAGAATCTACCATGTTAATAATAACGTAATTGTGACGTAT GCAGGATTGGATGGAGACGCAAGAAATATTATTGACAGGGCTAAGTATGAAGCGAACAGT TATTACCTTAATTTTCATACTAATATCCCTTTGCACATTTTAGCGAATCGTGTTTCTCTT TATATTCACTCGTTTACGTTGTACTGGCACTTGAGACCCTTTGCATCTTCCATCATACTG GCGTCATTCGACGAGAAGGAGAAAGGTGAAATTTACTGTGTAGAGCCTAACGGAGCTTGC TACAAATACGCAGGAGTAGTTATTGGTAAAAACAAGGAGATATTTAAAACAGAAATCGAA AAGAAAAACTACAAAGAAATTGATGTAAAGGAAGCCCTCGTGGATATATACAAAATAATC TTAACAAGTGACGATCATATGAATAAGAATAACTTACCTCACCTGGTTAATTTTTCTTGG ATTTGCAAAGACTCGTCGTATGAATATCAGAGTGTTGATTCTGAGACGTTAAACGAAGCC ATGCGTTTGGCCGTGGAGTCGGTGGAGCAGTTGAATCAGTAG
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  • Fasta :-

    MAGLSAGYDLSVSTFSPDGRLYQVEYIYKAINNNNTALSLECRDGLLTCCVNSNILKNKM IKQNSYNRIYHVNNNVIVTYAGLDGDARNIIDRAKYEANSYYLNFHTNIPLHILANRVSL YIHSFTLYWHLRPFASSIILASFDEKEKGEIYCVEPNGACYKYAGVVIGKNKEIFKTEIE KKNYKEIDVKEALVDIYKIILTSDDHMNKNNLPHLVNFSWICKDSSYEYQSVDSETLNEA MRLAVESVEQLNQ

  • title: active site
  • coordinates: N35,S53,I55,R68
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India