PcyM_0831100 | aspartyl proteinase, putative

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0831100SP0.0016520.9980890.000259CS pos: 24-25. ILC-VP. Pr: 0.8972
No Results

  • Fasta :-

    >PcyM_0831100 MGRAFLFAPLFALFVALLPPPILCVPPFSALKSVGGKQNLSHPTPLEDTSKKGLLLREIK LKNRFKNDIKGFIKNVRSFHDIIEDRTPNSLLYVQEDLLNFHNSQFIGDIEIGTPPQSFK VVFDTGSSNFALPSTKCVKGGCVSHKKFNPDQSRTYTRQLKGNKESIYTYIQYGTGKSIL EHGYDDVNLKGLRIKHQSVGLAIEESLHPFSDLPFDGIVGLGFSDPDFSFQKGYGTSLIE TIKKQNLLKRNIFSFYVPKNLKEPGSITFGRANSKYALEGRKIEWFPVISIYFWEINLID VQLSDNNLNMCENRKCRAAIDTGSSLLTGPSSLMQPLIEKLYLQKDCSNKSSLPNISFIL KNVEGKEVKFDFTPDDYILEETDEEDNSVQCVIGIMSLDVPAPRGPIFVFGNVFIRKYYS IFDNDHKLVGLTEARHDW
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0831100.fa Sequence name : PcyM_0831100 Sequence length : 438 VALUES OF COMPUTED PARAMETERS Coef20 : 4.334 CoefTot : -1.254 ChDiff : 2 ZoneTo : 46 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.188 2.188 0.407 0.838 MesoH : -0.784 0.256 -0.457 0.179 MuHd_075 : 24.401 19.942 9.167 6.077 MuHd_095 : 12.607 15.152 4.116 4.222 MuHd_100 : 10.735 11.595 3.374 3.088 MuHd_105 : 17.937 13.471 5.035 3.890 Hmax_075 : 10.850 9.100 1.736 4.218 Hmax_095 : 22.050 24.938 3.031 8.225 Hmax_100 : 19.700 20.700 3.138 7.820 Hmax_105 : 21.700 5.133 0.421 7.520 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5768 0.4232 DFMC : 0.6965 0.3035
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 438 PcyM_0831100 MGRAFLFAPLFALFVALLPPPILCVPPFSALKSVGGKQNLSHPTPLEDTSKKGLLLREIKLKNRFKNDIKGFIKNVRSFH 80 DIIEDRTPNSLLYVQEDLLNFHNSQFIGDIEIGTPPQSFKVVFDTGSSNFALPSTKCVKGGCVSHKKFNPDQSRTYTRQL 160 KGNKESIYTYIQYGTGKSILEHGYDDVNLKGLRIKHQSVGLAIEESLHPFSDLPFDGIVGLGFSDPDFSFQKGYGTSLIE 240 TIKKQNLLKRNIFSFYVPKNLKEPGSITFGRANSKYALEGRKIEWFPVISIYFWEINLIDVQLSDNNLNMCENRKCRAAI 320 DTGSSLLTGPSSLMQPLIEKLYLQKDCSNKSSLPNISFILKNVEGKEVKFDFTPDDYILEETDEEDNSVQCVIGIMSLDV 400 PAPRGPIFVFGNVFIRKYYSIFDNDHKLVGLTEARHDW 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................P... 320 ................................................................................ 400 ...................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_0831100 3 ----MGR|AF 0.078 . PcyM_0831100 32 PPFSALK|SV 0.121 . PcyM_0831100 37 LKSVGGK|QN 0.067 . PcyM_0831100 51 PLEDTSK|KG 0.054 . PcyM_0831100 52 LEDTSKK|GL 0.088 . PcyM_0831100 57 KKGLLLR|EI 0.082 . PcyM_0831100 60 LLLREIK|LK 0.087 . PcyM_0831100 62 LREIKLK|NR 0.065 . PcyM_0831100 64 EIKLKNR|FK 0.100 . PcyM_0831100 66 KLKNRFK|ND 0.069 . PcyM_0831100 70 RFKNDIK|GF 0.068 . PcyM_0831100 74 DIKGFIK|NV 0.068 . PcyM_0831100 77 GFIKNVR|SF 0.171 . PcyM_0831100 86 HDIIEDR|TP 0.076 . PcyM_0831100 120 TPPQSFK|VV 0.099 . PcyM_0831100 136 FALPSTK|CV 0.074 . PcyM_0831100 139 PSTKCVK|GG 0.062 . PcyM_0831100 146 GGCVSHK|KF 0.072 . PcyM_0831100 147 GCVSHKK|FN 0.121 . PcyM_0831100 154 FNPDQSR|TY 0.095 . PcyM_0831100 158 QSRTYTR|QL 0.115 . PcyM_0831100 161 TYTRQLK|GN 0.134 . PcyM_0831100 164 RQLKGNK|ES 0.055 . PcyM_0831100 177 IQYGTGK|SI 0.086 . PcyM_0831100 190 YDDVNLK|GL 0.066 . PcyM_0831100 193 VNLKGLR|IK 0.080 . PcyM_0831100 195 LKGLRIK|HQ 0.084 . PcyM_0831100 232 PDFSFQK|GY 0.081 . PcyM_0831100 243 SLIETIK|KQ 0.058 . PcyM_0831100 244 LIETIKK|QN 0.088 . PcyM_0831100 249 KKQNLLK|RN 0.061 . PcyM_0831100 250 KQNLLKR|NI 0.181 . PcyM_0831100 259 FSFYVPK|NL 0.063 . PcyM_0831100 262 YVPKNLK|EP 0.058 . PcyM_0831100 271 GSITFGR|AN 0.140 . PcyM_0831100 275 FGRANSK|YA 0.077 . PcyM_0831100 281 KYALEGR|KI 0.102 . PcyM_0831100 282 YALEGRK|IE 0.059 . PcyM_0831100 314 LNMCENR|KC 0.121 . PcyM_0831100 315 NMCENRK|CR 0.077 . PcyM_0831100 317 CENRKCR|AA 0.505 *ProP* PcyM_0831100 340 MQPLIEK|LY 0.054 . PcyM_0831100 345 EKLYLQK|DC 0.063 . PcyM_0831100 350 QKDCSNK|SS 0.076 . PcyM_0831100 361 NISFILK|NV 0.097 . PcyM_0831100 366 LKNVEGK|EV 0.077 . PcyM_0831100 369 VEGKEVK|FD 0.064 . PcyM_0831100 404 LDVPAPR|GP 0.091 . PcyM_0831100 416 FGNVFIR|KY 0.094 . PcyM_0831100 417 GNVFIRK|YY 0.107 . PcyM_0831100 427 IFDNDHK|LV 0.071 . PcyM_0831100 435 VGLTEAR|HD 0.079 . ____________________________^_________________

  • Fasta :-

    >PcyM_0831100 ATGGGACGAGCATTCCTCTTTGCCCCCCTGTTCGCCCTGTTCGTGGCTTTGCTGCCGCCC CCAATTTTGTGTGTACCTCCATTTAGCGCCCTTAAAAGCGTCGGGGGGAAACAAAACTTA AGTCACCCCACCCCCTTGGAGGACACCAGCAAGAAGGGCCTTCTCTTGAGAGAAATAAAA TTGAAAAACCGATTTAAAAATGACATAAAGGGGTTCATAAAAAACGTGAGGTCGTTCCAC GACATCATAGAGGACAGGACTCCAAACTCGTTGTTGTACGTGCAGGAGGACTTACTCAAT TTTCACAACAGCCAGTTTATTGGGGACATAGAGATCGGCACTCCTCCTCAAAGTTTCAAG GTCGTGTTCGACACCGGGTCCAGCAACTTCGCCCTGCCCTCCACGAAATGCGTCAAAGGA GGCTGCGTGTCCCACAAGAAATTCAACCCCGACCAGTCCAGGACGTACACGCGGCAGTTA AAAGGCAATAAGGAATCCATTTACACATACATCCAGTACGGGACAGGAAAGAGCATCCTT GAGCACGGATATGATGACGTCAATTTAAAGGGACTGAGGATCAAACATCAGAGTGTCGGG CTAGCCATAGAAGAGTCTTTACACCCCTTTTCGGATTTGCCCTTCGATGGGATTGTTGGC CTGGGATTTTCAGACCCGGACTTCAGCTTTCAAAAAGGATACGGGACGTCCTTAATAGAG ACGATAAAAAAGCAGAACCTGCTGAAAAGGAACATTTTCTCCTTTTATGTGCCAAAGAAC TTGAAAGAGCCCGGATCCATTACGTTCGGACGAGCCAACAGTAAATACGCCCTCGAAGGG AGGAAAATTGAGTGGTTTCCCGTCATATCGATTTATTTCTGGGAAATTAACCTGATAGAC GTACAACTCTCCGACAATAATTTAAACATGTGCGAAAATAGGAAATGTAGAGCGGCCATT GACACTGGGTCCAGTTTGCTAACCGGCCCATCCAGCCTGATGCAACCGCTGATAGAAAAA CTGTACCTGCAGAAGGACTGCTCAAATAAGAGCAGCTTGCCAAATATTTCTTTTATTTTA AAAAATGTCGAAGGGAAGGAGGTGAAGTTCGATTTTACGCCGGACGATTACATCCTGGAG GAAACTGACGAGGAGGATAATTCTGTTCAGTGCGTGATCGGAATAATGTCGCTGGACGTC CCCGCACCTCGCGGACCCATCTTTGTCTTCGGCAACGTATTCATAAGAAAGTACTACTCG ATATTTGACAACGACCATAAGCTCGTGGGCCTCACTGAAGCTCGGCACGACTGGTAA
  • Download Fasta

  • Fasta :-

    MGRAFLFAPLFALFVALLPPPILCVPPFSALKSVGGKQNLSHPTPLEDTSKKGLLLREIK LKNRFKNDIKGFIKNVRSFHDIIEDRTPNSLLYVQEDLLNFHNSQFIGDIEIGTPPQSFK VVFDTGSSNFALPSTKCVKGGCVSHKKFNPDQSRTYTRQLKGNKESIYTYIQYGTGKSIL EHGYDDVNLKGLRIKHQSVGLAIEESLHPFSDLPFDGIVGLGFSDPDFSFQKGYGTSLIE TIKKQNLLKRNIFSFYVPKNLKEPGSITFGRANSKYALEGRKIEWFPVISIYFWEINLID VQLSDNNLNMCENRKCRAAIDTGSSLLTGPSSLMQPLIEKLYLQKDCSNKSSLPNISFIL KNVEGKEVKFDFTPDDYILEETDEEDNSVQCVIGIMSLDVPAPRGPIFVFGNVFIRKYYS IFDNDHKLVGLTEARHDW

  • title: inhibitor binding site
  • coordinates: D124,G126,S128,Y170,I171,Q172,I218
No Results
No Results
IDSitePeptideScoreMethod
PcyM_0831100420 SRKYYSIFDN0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India