PcyM_0946400 | OTU domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0946400OTHER0.9999910.0000010.000008
No Results

  • Fasta :-

    >PcyM_0946400 MDGGENEARISYHEYKRRLKKLTEEIKKEKKKKTINKNKNSDNLTKLEEELSKLNAMYNL GNAEDGGEMNNSEKQKDHDSEANIHEDMKDGVTTTELYSYNAVSKKALRNIKRTQRKEME IEKIEQSRSKIGELEYDELAECLKKVNKTIHPIAPDGNCLYESILHQLRQRVSGCKYHEE DFLNLLHEDRFSLDSVNLRDYQNGGLFDFRIFSDFDPQGLSSDILRFLAAVYILQNEEQF VHFVYATEGDEPAADTYFCYCEAIIKGVYGSEIEINALSKILKKKITVYDVNMKISYGEE HETELFICFHHKLYALGKHYNSVVDM
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0946400.fa Sequence name : PcyM_0946400 Sequence length : 326 VALUES OF COMPUTED PARAMETERS Coef20 : 3.225 CoefTot : 0.000 ChDiff : -12 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.165 1.176 -0.053 0.404 MesoH : -0.896 0.259 -0.408 0.233 MuHd_075 : 16.763 9.373 3.811 3.803 MuHd_095 : 36.770 12.329 9.714 6.392 MuHd_100 : 28.319 10.981 7.982 4.920 MuHd_105 : 15.313 8.401 5.043 2.790 Hmax_075 : -7.700 -3.150 -4.466 0.700 Hmax_095 : -3.600 -4.000 -2.746 1.180 Hmax_100 : -3.000 -3.600 -2.770 1.340 Hmax_105 : -19.950 -8.600 -6.461 -1.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9665 0.0335 DFMC : 0.9619 0.0381
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 326 PcyM_0946400 MDGGENEARISYHEYKRRLKKLTEEIKKEKKKKTINKNKNSDNLTKLEEELSKLNAMYNLGNAEDGGEMNNSEKQKDHDS 80 EANIHEDMKDGVTTTELYSYNAVSKKALRNIKRTQRKEMEIEKIEQSRSKIGELEYDELAECLKKVNKTIHPIAPDGNCL 160 YESILHQLRQRVSGCKYHEEDFLNLLHEDRFSLDSVNLRDYQNGGLFDFRIFSDFDPQGLSSDILRFLAAVYILQNEEQF 240 VHFVYATEGDEPAADTYFCYCEAIIKGVYGSEIEINALSKILKKKITVYDVNMKISYGEEHETELFICFHHKLYALGKHY 320 NSVVDM 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0946400 9 GGENEAR|IS 0.091 . PcyM_0946400 16 ISYHEYK|RR 0.070 . PcyM_0946400 17 SYHEYKR|RL 0.152 . PcyM_0946400 18 YHEYKRR|LK 0.116 . PcyM_0946400 20 EYKRRLK|KL 0.113 . PcyM_0946400 21 YKRRLKK|LT 0.393 . PcyM_0946400 27 KLTEEIK|KE 0.056 . PcyM_0946400 28 LTEEIKK|EK 0.081 . PcyM_0946400 30 EEIKKEK|KK 0.064 . PcyM_0946400 31 EIKKEKK|KK 0.088 . PcyM_0946400 32 IKKEKKK|KT 0.135 . PcyM_0946400 33 KKEKKKK|TI 0.167 . PcyM_0946400 37 KKKTINK|NK 0.065 . PcyM_0946400 39 KTINKNK|NS 0.068 . PcyM_0946400 46 NSDNLTK|LE 0.058 . PcyM_0946400 53 LEEELSK|LN 0.057 . PcyM_0946400 74 EMNNSEK|QK 0.066 . PcyM_0946400 76 NNSEKQK|DH 0.108 . PcyM_0946400 89 NIHEDMK|DG 0.065 . PcyM_0946400 105 SYNAVSK|KA 0.069 . PcyM_0946400 106 YNAVSKK|AL 0.153 . PcyM_0946400 109 VSKKALR|NI 0.082 . PcyM_0946400 112 KALRNIK|RT 0.128 . PcyM_0946400 113 ALRNIKR|TQ 0.186 . PcyM_0946400 116 NIKRTQR|KE 0.226 . PcyM_0946400 117 IKRTQRK|EM 0.104 . PcyM_0946400 123 KEMEIEK|IE 0.054 . PcyM_0946400 128 EKIEQSR|SK 0.147 . PcyM_0946400 130 IEQSRSK|IG 0.065 . PcyM_0946400 144 ELAECLK|KV 0.070 . PcyM_0946400 145 LAECLKK|VN 0.087 . PcyM_0946400 148 CLKKVNK|TI 0.077 . PcyM_0946400 169 SILHQLR|QR 0.069 . PcyM_0946400 171 LHQLRQR|VS 0.098 . PcyM_0946400 176 QRVSGCK|YH 0.066 . PcyM_0946400 190 NLLHEDR|FS 0.084 . PcyM_0946400 199 LDSVNLR|DY 0.126 . PcyM_0946400 210 GGLFDFR|IF 0.103 . PcyM_0946400 226 LSSDILR|FL 0.125 . PcyM_0946400 266 YCEAIIK|GV 0.077 . PcyM_0946400 280 EINALSK|IL 0.071 . PcyM_0946400 283 ALSKILK|KK 0.073 . PcyM_0946400 284 LSKILKK|KI 0.100 . PcyM_0946400 285 SKILKKK|IT 0.120 . PcyM_0946400 294 VYDVNMK|IS 0.064 . PcyM_0946400 312 FICFHHK|LY 0.066 . PcyM_0946400 318 KLYALGK|HY 0.081 . ____________________________^_________________

  • Fasta :-

    >PcyM_0946400 ATGGATGGGGGAGAAAACGAAGCGCGCATCAGCTACCATGAGTACAAAAGGAGGCTGAAG AAACTCACGGAGGAAATAAAAAAGGAAAAGAAAAAAAAAACGATTAACAAAAATAAAAAT AGCGATAATTTGACCAAATTGGAAGAAGAACTGAGCAAGCTGAACGCCATGTACAATCTG GGCAATGCGGAGGATGGAGGCGAAATGAATAACTCGGAAAAGCAGAAAGATCACGATAGT GAGGCAAACATACATGAAGACATGAAGGATGGTGTAACTACCACGGAGCTATACTCATAC AATGCAGTGTCGAAAAAGGCATTAAGAAATATAAAAAGGACACAAAGAAAAGAGATGGAG ATTGAAAAGATTGAGCAGTCGAGAAGCAAAATAGGAGAACTTGAATATGATGAATTGGCT GAATGTTTGAAAAAAGTAAATAAAACGATCCACCCCATTGCTCCTGATGGGAATTGTCTA TACGAATCGATTTTACACCAACTGAGACAGAGAGTAAGCGGATGTAAATATCACGAAGAA GACTTTTTGAATCTCCTACATGAGGACAGATTTTCTCTGGATAGTGTAAATTTGAGGGAC TACCAAAACGGGGGTCTCTTTGACTTTCGCATTTTCTCCGATTTTGACCCACAGGGCTTG AGCAGTGACATCCTGCGCTTTCTCGCTGCGGTGTATATTTTGCAGAACGAGGAGCAGTTT GTTCACTTTGTGTATGCGACTGAGGGGGACGAGCCGGCTGCGGACACCTACTTCTGTTAT TGTGAGGCTATTATCAAGGGGGTTTACGGGAGCGAAATCGAAATCAATGCCCTCTCGAAA ATCTTGAAGAAGAAAATTACGGTCTATGACGTAAATATGAAAATTTCGTATGGAGAGGAG CATGAAACTGAGCTGTTCATATGCTTCCACCATAAGCTGTACGCATTAGGGAAGCACTAC AATTCCGTCGTTGACATGTGA
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  • Fasta :-

    MDGGENEARISYHEYKRRLKKLTEEIKKEKKKKTINKNKNSDNLTKLEEELSKLNAMYNL GNAEDGGEMNNSEKQKDHDSEANIHEDMKDGVTTTELYSYNAVSKKALRNIKRTQRKEME IEKIEQSRSKIGELEYDELAECLKKVNKTIHPIAPDGNCLYESILHQLRQRVSGCKYHEE DFLNLLHEDRFSLDSVNLRDYQNGGLFDFRIFSDFDPQGLSSDILRFLAAVYILQNEEQF VHFVYATEGDEPAADTYFCYCEAIIKGVYGSEIEINALSKILKKKITVYDVNMKISYGEE HETELFICFHHKLYALGKHYNSVVDM

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_094640011 SEARISYHEY0.995unspPcyM_0946400104 SYNAVSKKAL0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India