PcyM_1035400 | lysophospholipase, putative

UniProt_ID:

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	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PcyM_1035400	OTHER	0.999858	0.000129	0.000013

No Results

Fasta :-
>PcyM_1035400 MVQNELCDSEAVLKCNSIDGKPQLDSFLNKDGLMIRTYGWLVKNAIGIIILVHGLNSHVR FSFLRHNVDIVGNEKAILKDENNYYVYKDSWIERFNKNGYSVYGIDLQGHGKSDGWENLR VNVKRFDDIAYDVIEYIQKIQEKLWKNENSCDTLPDDNKNVSKKDIPTYLIGQSMGGNVV LRTLQLIGKSKDEAKKKLNIKGCISLSGMISIERIIASPRSYKFKYFYLPFTRLFSFFFP RLRLINNMLYIKYQYMHDLYKYDKIRYKKGITYRFAYQLLKAMDNLQKDMKHIPKDIPIL FIHSKDDTLCYYRGVVSFYSRLSNDIKELHILEDMEHMLTVEPGNENVLNKIMQWLSKLT PKGVTTKFRKKKKKKKNS
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1035400.fa Sequence name : PcyM_1035400 Sequence length : 378 VALUES OF COMPUTED PARAMETERS Coef20 : 3.499 CoefTot : -0.289 ChDiff : 21 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.935 1.582 0.138 0.664 MesoH : -0.871 0.227 -0.452 0.145 MuHd_075 : 24.916 17.474 8.044 4.648 MuHd_095 : 5.228 6.623 2.636 1.796 MuHd_100 : 5.804 3.247 0.886 1.678 MuHd_105 : 10.320 10.192 3.196 3.145 Hmax_075 : 9.450 12.337 2.031 3.404 Hmax_095 : -0.175 6.388 -1.255 1.838 Hmax_100 : -1.000 8.200 0.695 2.700 Hmax_105 : 7.700 13.650 0.678 4.013 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9247 0.0753 DFMC : 0.9661 0.0339

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 378 PcyM_1035400 MVQNELCDSEAVLKCNSIDGKPQLDSFLNKDGLMIRTYGWLVKNAIGIIILVHGLNSHVRFSFLRHNVDIVGNEKAILKD 80 ENNYYVYKDSWIERFNKNGYSVYGIDLQGHGKSDGWENLRVNVKRFDDIAYDVIEYIQKIQEKLWKNENSCDTLPDDNKN 160 VSKKDIPTYLIGQSMGGNVVLRTLQLIGKSKDEAKKKLNIKGCISLSGMISIERIIASPRSYKFKYFYLPFTRLFSFFFP 240 RLRLINNMLYIKYQYMHDLYKYDKIRYKKGITYRFAYQLLKAMDNLQKDMKHIPKDIPILFIHSKDDTLCYYRGVVSFYS 320 RLSNDIKELHILEDMEHMLTVEPGNENVLNKIMQWLSKLTPKGVTTKFRKKKKKKKNS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1035400 14 DSEAVLK|CN 0.065 . PcyM_1035400 21 CNSIDGK|PQ 0.069 . PcyM_1035400 30 LDSFLNK|DG 0.086 . PcyM_1035400 36 KDGLMIR|TY 0.091 . PcyM_1035400 43 TYGWLVK|NA 0.073 . PcyM_1035400 60 GLNSHVR|FS 0.099 . PcyM_1035400 65 VRFSFLR|HN 0.105 . PcyM_1035400 75 DIVGNEK|AI 0.060 . PcyM_1035400 79 NEKAILK|DE 0.059 . PcyM_1035400 88 NNYYVYK|DS 0.084 . PcyM_1035400 94 KDSWIER|FN 0.126 . PcyM_1035400 97 WIERFNK|NG 0.100 . PcyM_1035400 112 DLQGHGK|SD 0.089 . PcyM_1035400 120 DGWENLR|VN 0.068 . PcyM_1035400 124 NLRVNVK|RF 0.068 . PcyM_1035400 125 LRVNVKR|FD 0.370 . PcyM_1035400 139 VIEYIQK|IQ 0.059 . PcyM_1035400 143 IQKIQEK|LW 0.064 . PcyM_1035400 146 IQEKLWK|NE 0.060 . PcyM_1035400 159 TLPDDNK|NV 0.074 . PcyM_1035400 163 DNKNVSK|KD 0.063 . PcyM_1035400 164 NKNVSKK|DI 0.260 . PcyM_1035400 182 GGNVVLR|TL 0.107 . PcyM_1035400 189 TLQLIGK|SK 0.084 . PcyM_1035400 191 QLIGKSK|DE 0.070 . PcyM_1035400 195 KSKDEAK|KK 0.066 . PcyM_1035400 196 SKDEAKK|KL 0.102 . PcyM_1035400 197 KDEAKKK|LN 0.121 . PcyM_1035400 201 KKKLNIK|GC 0.065 . PcyM_1035400 214 GMISIER|II 0.071 . PcyM_1035400 220 RIIASPR|SY 0.132 . PcyM_1035400 223 ASPRSYK|FK 0.162 . PcyM_1035400 225 PRSYKFK|YF 0.092 . PcyM_1035400 233 FYLPFTR|LF 0.072 . PcyM_1035400 241 FSFFFPR|LR 0.074 . PcyM_1035400 243 FFFPRLR|LI 0.077 . PcyM_1035400 252 NNMLYIK|YQ 0.059 . PcyM_1035400 261 YMHDLYK|YD 0.061 . PcyM_1035400 264 DLYKYDK|IR 0.062 . PcyM_1035400 266 YKYDKIR|YK 0.110 . PcyM_1035400 268 YDKIRYK|KG 0.064 . PcyM_1035400 269 DKIRYKK|GI 0.314 . PcyM_1035400 274 KKGITYR|FA 0.189 . PcyM_1035400 281 FAYQLLK|AM 0.062 . PcyM_1035400 288 AMDNLQK|DM 0.069 . PcyM_1035400 291 NLQKDMK|HI 0.072 . PcyM_1035400 295 DMKHIPK|DI 0.078 . PcyM_1035400 305 ILFIHSK|DD 0.065 . PcyM_1035400 313 DTLCYYR|GV 0.078 . PcyM_1035400 321 VVSFYSR|LS 0.093 . PcyM_1035400 327 RLSNDIK|EL 0.088 . PcyM_1035400 351 NENVLNK|IM 0.061 . PcyM_1035400 358 IMQWLSK|LT 0.075 . PcyM_1035400 362 LSKLTPK|GV 0.103 . PcyM_1035400 367 PKGVTTK|FR 0.067 . PcyM_1035400 369 GVTTKFR|KK 0.101 . PcyM_1035400 370 VTTKFRK|KK 0.079 . PcyM_1035400 371 TTKFRKK|KK 0.098 . PcyM_1035400 372 TKFRKKK|KK 0.386 . PcyM_1035400 373 KFRKKKK|KK 0.126 . PcyM_1035400 374 FRKKKKK|KK 0.145 . PcyM_1035400 375 RKKKKKK|KN 0.159 . PcyM_1035400 376 KKKKKKK|NS 0.144 . ____________________________^_________________

Fasta :-
>PcyM_1035400 ATGGTACAAAATGAATTATGTGATAGTGAAGCGGTCTTAAAATGTAACAGTATCGATGGA AAACCACAACTTGATTCATTTCTGAATAAGGATGGTTTAATGATAAGGACATACGGTTGG CTAGTAAAAAACGCAATAGGTATTATCATTTTAGTTCATGGTTTAAATTCACATGTAAGA TTTTCATTCCTAAGACACAATGTAGATATAGTGGGTAACGAGAAGGCCATATTGAAAGAC GAAAATAATTATTACGTTTACAAGGATAGCTGGATAGAGCGATTTAATAAAAATGGATAT TCAGTATATGGAATAGACTTACAAGGTCACGGGAAATCTGATGGATGGGAAAATTTAAGG GTTAACGTAAAACGTTTTGATGATATAGCATACGATGTGATAGAGTATATTCAGAAAATT CAAGAGAAATTATGGAAGAATGAAAATTCATGTGACACCCTACCTGATGATAATAAGAAT GTTAGTAAAAAAGACATTCCCACGTATTTAATTGGTCAGTCCATGGGAGGGAATGTCGTA TTAAGGACATTGCAATTGATAGGGAAATCGAAAGATGAGGCCAAGAAAAAATTAAATATT AAAGGTTGTATATCGTTATCAGGGATGATTTCCATCGAGAGAATAATTGCGTCACCACGT TCATATAAGTTTAAATATTTTTATTTGCCTTTTACAAGACTATTTTCCTTTTTTTTTCCA CGGTTAAGACTTATCAACAATATGCTCTATATAAAGTACCAGTATATGCATGACCTTTAT AAATATGATAAAATTAGATACAAAAAAGGAATAACGTACAGATTTGCATACCAGCTTTTA AAAGCAATGGATAATTTACAAAAAGATATGAAGCATATTCCCAAGGATATTCCCATTTTA TTTATTCATTCCAAGGATGACACTTTGTGTTATTATAGGGGCGTTGTGTCATTTTATAGT AGGCTAAGTAATGATATTAAAGAATTGCACATTCTTGAAGACATGGAGCATATGTTAACT GTAGAGCCGGGGAATGAAAACGTTTTAAATAAAATTATGCAATGGCTTTCAAAGCTAACC CCTAAAGGAGTAACTACGAAATTTAGAAAAAAAAAGAAAAAAAAAAAAAATTCCTAG
Download Fasta

Fasta :-

MVQNELCDSEAVLKCNSIDGKPQLDSFLNKDGLMIRTYGWLVKNAIGIIILVHGLNSHVR FSFLRHNVDIVGNEKAILKDENNYYVYKDSWIERFNKNGYSVYGIDLQGHGKSDGWENLR VNVKRFDDIAYDVIEYIQKIQEKLWKNENSCDTLPDDNKNVSKKDIPTYLIGQSMGGNVV LRTLQLIGKSKDEAKKKLNIKGCISLSGMISIERIIASPRSYKFKYFYLPFTRLFSFFFP RLRLINNMLYIKYQYMHDLYKYDKIRYKKGITYRFAYQLLKAMDNLQKDMKHIPKDIPIL FIHSKDDTLCYYRGVVSFYSRLSNDIKELHILEDMEHMLTVEPGNENVLNKIMQWLSKLT PKGVTTKFRKKKKKKKNS

SCOPe

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PcyM_1035400	304 S	LFIHSKDDT	0.991	unsp	PcyM_1035400	304 S	LFIHSKDDT	0.991	unsp	PcyM_1035400	304 S	LFIHSKDDT	0.991	unsp	PcyM_1035400	162 S	NKNVSKKDI	0.998	unsp	PcyM_1035400	221 S	ASPRSYKFK	0.992	unsp

PcyM_1035400 | lysophospholipase, putative

ID's

UniProt_ID:

GEO Functions

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

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Domains

SCOPe

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India