PcyM_1121700 | conserved Plasmodium protein, unknown function

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1121700OTHER0.9999990.0000000.000001
No Results

  • Fasta :-

    >PcyM_1121700 MHYEELTNDYCEEGSKNVERISLAGSMRLMYCFFSITFLIVFSFATIGKNGIVCLFLSFS PSCAYLYLFGRQIKRRIKIVHAIEMVLYGAVVSVFLAGSIEYSFSLFFFYFCHVCCVKDV RGTLLFVCSVVVFFYFFLVVAYVEEVSKVLPMVFVQMNEKRNKNEYVELPLVDSTSFLNQ GGHEADHDEKKDNGVDKFRYIYANDILEYIFFSLCSSAGFSSTENLLYAAQATRQNFLSI IVLRNLICVLFHMSCSGVASYNIASRMNHKSRNGCVANLLSVLGCLFTSSLFHALYDYSI YFSSLSIPTYQASFLTLLFMYCFFSMLLMFSIFVRRSVKGGGGGHSCA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1121700.fa Sequence name : PcyM_1121700 Sequence length : 348 VALUES OF COMPUTED PARAMETERS Coef20 : 2.756 CoefTot : -0.396 ChDiff : 2 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.694 3.000 0.567 0.957 MesoH : 1.041 1.623 0.118 0.574 MuHd_075 : 22.360 12.132 6.850 2.526 MuHd_095 : 42.392 19.726 13.849 6.494 MuHd_100 : 36.883 17.127 12.495 5.427 MuHd_105 : 28.217 12.501 9.317 3.798 Hmax_075 : -0.117 3.033 -0.446 1.820 Hmax_095 : 7.700 5.250 2.044 2.853 Hmax_100 : 1.400 0.800 -0.156 2.370 Hmax_105 : -1.925 0.500 -1.583 0.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9880 0.0120 DFMC : 0.9757 0.0243
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 348 PcyM_1121700 MHYEELTNDYCEEGSKNVERISLAGSMRLMYCFFSITFLIVFSFATIGKNGIVCLFLSFSPSCAYLYLFGRQIKRRIKIV 80 HAIEMVLYGAVVSVFLAGSIEYSFSLFFFYFCHVCCVKDVRGTLLFVCSVVVFFYFFLVVAYVEEVSKVLPMVFVQMNEK 160 RNKNEYVELPLVDSTSFLNQGGHEADHDEKKDNGVDKFRYIYANDILEYIFFSLCSSAGFSSTENLLYAAQATRQNFLSI 240 IVLRNLICVLFHMSCSGVASYNIASRMNHKSRNGCVANLLSVLGCLFTSSLFHALYDYSIYFSSLSIPTYQASFLTLLFM 320 YCFFSMLLMFSIFVRRSVKGGGGGHSCA 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...............P............ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_1121700 16 YCEEGSK|NV 0.065 . PcyM_1121700 20 GSKNVER|IS 0.110 . PcyM_1121700 28 SLAGSMR|LM 0.088 . PcyM_1121700 49 SFATIGK|NG 0.063 . PcyM_1121700 71 YLYLFGR|QI 0.088 . PcyM_1121700 74 LFGRQIK|RR 0.124 . PcyM_1121700 75 FGRQIKR|RI 0.159 . PcyM_1121700 76 GRQIKRR|IK 0.194 . PcyM_1121700 78 QIKRRIK|IV 0.272 . PcyM_1121700 118 CHVCCVK|DV 0.079 . PcyM_1121700 121 CCVKDVR|GT 0.079 . PcyM_1121700 148 YVEEVSK|VL 0.062 . PcyM_1121700 160 FVQMNEK|RN 0.055 . PcyM_1121700 161 VQMNEKR|NK 0.167 . PcyM_1121700 163 MNEKRNK|NE 0.069 . PcyM_1121700 190 EADHDEK|KD 0.057 . PcyM_1121700 191 ADHDEKK|DN 0.147 . PcyM_1121700 197 KDNGVDK|FR 0.081 . PcyM_1121700 199 NGVDKFR|YI 0.110 . PcyM_1121700 234 YAAQATR|QN 0.083 . PcyM_1121700 244 LSIIVLR|NL 0.126 . PcyM_1121700 266 SYNIASR|MN 0.125 . PcyM_1121700 270 ASRMNHK|SR 0.080 . PcyM_1121700 272 RMNHKSR|NG 0.109 . PcyM_1121700 335 MFSIFVR|RS 0.121 . PcyM_1121700 336 FSIFVRR|SV 0.536 *ProP* PcyM_1121700 339 FVRRSVK|GG 0.192 . ____________________________^_________________

  • Fasta :-

    >PcyM_1121700 ATGCATTATGAGGAATTGACAAACGACTATTGCGAAGAAGGCTCAAAAAATGTAGAGAGG ATTTCCCTTGCGGGGTCTATGCGTCTGATGTACTGCTTTTTCTCCATAACATTTCTGATT GTTTTTTCTTTTGCCACCATCGGAAAAAATGGAATCGTCTGCTTATTTCTGTCCTTTTCC CCAAGTTGTGCTTACCTATATTTGTTTGGAAGACAAATAAAAAGAAGGATAAAAATTGTG CATGCTATCGAAATGGTATTGTACGGAGCTGTAGTGTCCGTTTTTCTGGCCGGCAGCATA GAATATTCCTTTTCTTTATTTTTTTTTTATTTTTGTCACGTATGTTGTGTGAAAGATGTT AGAGGGACTCTTCTTTTTGTGTGTTCAGTGGTGGTGTTTTTTTACTTCTTCCTGGTAGTG GCGTACGTGGAGGAAGTGTCTAAAGTTCTTCCAATGGTTTTCGTCCAAATGAATGAGAAA AGAAACAAAAACGAGTATGTAGAATTACCCCTCGTTGACAGCACGAGCTTCTTAAATCAA GGAGGACATGAAGCAGACCATGATGAGAAGAAAGACAACGGGGTGGATAAATTTAGATAC ATTTACGCAAATGATATACTGGAATATATTTTTTTTTCCTTGTGCTCATCCGCCGGATTT TCGAGCACCGAAAACTTACTTTACGCTGCTCAAGCGACAAGGCAGAACTTCTTATCGATA ATTGTGTTAAGAAATTTGATCTGTGTGCTGTTCCACATGAGCTGTTCCGGAGTAGCTTCT TACAATATTGCCTCGCGAATGAATCATAAAAGCAGGAACGGATGTGTTGCAAATTTGCTG AGCGTCCTGGGCTGCCTGTTCACTTCTTCCCTCTTCCACGCATTGTATGACTACTCTATA TATTTCAGTTCGTTAAGTATACCCACGTATCAAGCTTCCTTTTTGACCCTGTTGTTTATG TATTGCTTCTTCTCCATGCTGCTCATGTTTTCCATTTTTGTGAGGCGCTCCGTGAAGGGG GGAGGGGGGGGTCACTCGTGCGCATAA
  • Download Fasta

  • Fasta :-

    MHYEELTNDYCEEGSKNVERISLAGSMRLMYCFFSITFLIVFSFATIGKNGIVCLFLSFS PSCAYLYLFGRQIKRRIKIVHAIEMVLYGAVVSVFLAGSIEYSFSLFFFYFCHVCCVKDV RGTLLFVCSVVVFFYFFLVVAYVEEVSKVLPMVFVQMNEKRNKNEYVELPLVDSTSFLNQ GGHEADHDEKKDNGVDKFRYIYANDILEYIFFSLCSSAGFSSTENLLYAAQATRQNFLSI IVLRNLICVLFHMSCSGVASYNIASRMNHKSRNGCVANLLSVLGCLFTSSLFHALYDYSI YFSSLSIPTYQASFLTLLFMYCFFSMLLMFSIFVRRSVKGGGGGHSCA

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IDSitePeptideScoreMethod
PcyM_1121700337 SFVRRSVKGG0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India