PcyM_1206500 | peptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_1206500OTHER0.9999730.0000110.000017
No Results

  • Fasta :-

    >PcyM_1206500 MHFDFTLQTCCERNQNITFVSISACVLINAMFWKCKILEPFKLLTVFLHEFSHASACWLT GGRVKSIEVNRNHGGCTNTIGGNKFLILPAGYIGSCFYGMFFILMAYINKWTLITSAAFL CFLLLIVLIFYANNFFLRLLCVLFLTLTISVWVLCVHFKEDVHYWPLKIIMTFIGVLNEI YSMVDIIEDLITRSVPESDAYKYAELTKCNSKFCGALWFVVNLTFICLTVYLIGAIHVKT FDN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1206500.fa Sequence name : PcyM_1206500 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 4.055 CoefTot : -0.239 ChDiff : 2 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.588 2.982 0.610 0.924 MesoH : 1.542 1.802 0.230 0.660 MuHd_075 : 21.459 9.838 6.174 3.448 MuHd_095 : 21.147 11.825 7.360 2.965 MuHd_100 : 16.958 14.943 7.903 3.248 MuHd_105 : 11.708 16.425 7.431 3.178 Hmax_075 : 9.567 6.417 2.658 2.070 Hmax_095 : 5.425 4.812 0.777 2.371 Hmax_100 : 10.000 11.900 3.562 3.450 Hmax_105 : 0.583 9.800 1.342 2.695 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9754 0.0246 DFMC : 0.9537 0.0463
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 PcyM_1206500 MHFDFTLQTCCERNQNITFVSISACVLINAMFWKCKILEPFKLLTVFLHEFSHASACWLTGGRVKSIEVNRNHGGCTNTI 80 GGNKFLILPAGYIGSCFYGMFFILMAYINKWTLITSAAFLCFLLLIVLIFYANNFFLRLLCVLFLTLTISVWVLCVHFKE 160 DVHYWPLKIIMTFIGVLNEIYSMVDIIEDLITRSVPESDAYKYAELTKCNSKFCGALWFVVNLTFICLTVYLIGAIHVKT 240 FDN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1206500 13 LQTCCER|NQ 0.073 . PcyM_1206500 34 INAMFWK|CK 0.073 . PcyM_1206500 36 AMFWKCK|IL 0.071 . PcyM_1206500 42 KILEPFK|LL 0.061 . PcyM_1206500 63 CWLTGGR|VK 0.068 . PcyM_1206500 65 LTGGRVK|SI 0.100 . PcyM_1206500 71 KSIEVNR|NH 0.116 . PcyM_1206500 84 NTIGGNK|FL 0.056 . PcyM_1206500 110 LMAYINK|WT 0.059 . PcyM_1206500 138 ANNFFLR|LL 0.106 . PcyM_1206500 159 VLCVHFK|ED 0.062 . PcyM_1206500 168 VHYWPLK|II 0.073 . PcyM_1206500 193 IEDLITR|SV 0.121 . PcyM_1206500 202 PESDAYK|YA 0.075 . PcyM_1206500 208 KYAELTK|CN 0.066 . PcyM_1206500 212 LTKCNSK|FC 0.072 . PcyM_1206500 239 IGAIHVK|TF 0.069 . ____________________________^_________________

  • Fasta :-

    >PcyM_1206500 ATGCATTTCGACTTCACCTTGCAGACTTGCTGCGAGCGAAACCAAAACATCACCTTCGTG AGCATCTCTGCTTGCGTGCTGATAAACGCCATGTTTTGGAAGTGCAAAATTTTGGAGCCC TTCAAACTGCTAACCGTTTTTTTGCACGAGTTTTCGCATGCGTCGGCCTGTTGGTTGACG GGGGGCCGAGTGAAGAGCATAGAGGTGAACAGAAATCATGGAGGATGCACAAACACAATT GGAGGAAACAAATTCCTAATTCTGCCCGCTGGCTACATTGGCTCCTGTTTCTACGGGATG TTTTTTATTTTGATGGCATACATAAACAAATGGACCCTGATCACATCCGCTGCCTTCTTA TGCTTCTTACTCTTAATAGTGTTAATTTTTTATGCGAATAATTTTTTCCTAAGGCTTCTT TGCGTCCTCTTCTTAACGCTTACCATTTCGGTGTGGGTTTTGTGTGTGCATTTTAAGGAA GATGTGCACTATTGGCCCCTAAAAATTATCATGACTTTTATAGGCGTACTCAACGAAATA TATAGCATGGTGGACATAATTGAAGACTTAATTACGAGATCTGTGCCTGAGTCCGATGCG TATAAATATGCAGAACTGACCAAATGTAACTCCAAGTTTTGTGGGGCCCTATGGTTTGTG GTCAATTTGACTTTTATATGTTTGACCGTTTATTTGATCGGCGCAATTCATGTGAAGACC TTTGACAATTGA
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  • Fasta :-

    MHFDFTLQTCCERNQNITFVSISACVLINAMFWKCKILEPFKLLTVFLHEFSHASACWLT GGRVKSIEVNRNHGGCTNTIGGNKFLILPAGYIGSCFYGMFFILMAYINKWTLITSAAFL CFLLLIVLIFYANNFFLRLLCVLFLTLTISVWVLCVHFKEDVHYWPLKIIMTFIGVLNEI YSMVDIIEDLITRSVPESDAYKYAELTKCNSKFCGALWFVVNLTFICLTVYLIGAIHVKT FDN

    No Results
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IDSitePeptideScoreMethod
PcyM_120650066 SGRVKSIEVN0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India