PcyM_1226200 | signal peptidase 21 kDa subunit, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006465      

  • Computed_GO_Processes:  signal peptide processing      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1226200OTHER0.9867820.0131320.000086
No Results

  • Fasta :-

    >PcyM_1226200 MEFLKEQYNAIALEFKKNFRNPRDGICHVLNVVCLLLNALMIWKVLVVLTGCESPVVVVL SGSMEPGYFRGDTLALWHPPNIHAGDVVVYQINGRDIPIVHRILNIHISKDNKFHLLSKG DNNNIDDRGLYEPNQYWLENEHVLGLSVGYAPYIGMLTIWVNEYPVMKWGIVSLMLFMIL LGYE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1226200.fa Sequence name : PcyM_1226200 Sequence length : 184 VALUES OF COMPUTED PARAMETERS Coef20 : 3.725 CoefTot : 0.000 ChDiff : -4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.894 2.494 0.333 0.742 MesoH : 0.208 0.929 -0.139 0.405 MuHd_075 : 8.479 3.553 2.587 1.246 MuHd_095 : 36.088 18.822 10.462 6.420 MuHd_100 : 30.996 15.585 8.504 5.606 MuHd_105 : 18.928 10.059 4.946 3.608 Hmax_075 : -3.400 4.200 -3.430 2.000 Hmax_095 : 10.100 10.900 0.515 4.930 Hmax_100 : 9.100 10.000 0.050 4.440 Hmax_105 : -4.200 2.000 -3.914 1.951 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9922 0.0078 DFMC : 0.9888 0.0112
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 184 PcyM_1226200 MEFLKEQYNAIALEFKKNFRNPRDGICHVLNVVCLLLNALMIWKVLVVLTGCESPVVVVLSGSMEPGYFRGDTLALWHPP 80 NIHAGDVVVYQINGRDIPIVHRILNIHISKDNKFHLLSKGDNNNIDDRGLYEPNQYWLENEHVLGLSVGYAPYIGMLTIW 160 VNEYPVMKWGIVSLMLFMILLGYE 240 ................................................................................ 80 ................................................................................ 160 ........................ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1226200 5 --MEFLK|EQ 0.061 . PcyM_1226200 16 AIALEFK|KN 0.065 . PcyM_1226200 17 IALEFKK|NF 0.083 . PcyM_1226200 20 EFKKNFR|NP 0.096 . PcyM_1226200 23 KNFRNPR|DG 0.300 . PcyM_1226200 44 NALMIWK|VL 0.055 . PcyM_1226200 70 MEPGYFR|GD 0.086 . PcyM_1226200 95 VYQINGR|DI 0.100 . PcyM_1226200 102 DIPIVHR|IL 0.077 . PcyM_1226200 110 LNIHISK|DN 0.069 . PcyM_1226200 113 HISKDNK|FH 0.063 . PcyM_1226200 119 KFHLLSK|GD 0.064 . PcyM_1226200 128 NNNIDDR|GL 0.090 . PcyM_1226200 168 NEYPVMK|WG 0.069 . ____________________________^_________________

  • Fasta :-

    >PcyM_1226200 ATGGAATTCTTAAAGGAGCAGTACAACGCCATTGCGCTAGAATTTAAGAAGAACTTCAGA AACCCCCGAGATGGCATATGCCACGTGCTGAACGTAGTGTGTTTGCTGTTGAATGCCTTG ATGATTTGGAAGGTGCTTGTCGTGCTCACAGGCTGCGAATCCCCAGTTGTGGTTGTCCTG AGTGGCAGTATGGAACCAGGCTACTTCAGAGGAGACACCTTGGCACTGTGGCACCCGCCG AACATCCATGCAGGTGACGTCGTGGTGTACCAAATAAATGGAAGAGACATCCCCATTGTG CATAGGATATTAAACATTCACATATCGAAGGACAACAAATTTCATTTGCTATCAAAAGGG GACAATAACAACATTGACGACAGAGGGCTCTATGAGCCCAACCAGTATTGGCTAGAAAAC GAACATGTGCTTGGTCTCTCAGTTGGATATGCGCCATACATCGGAATGCTAACCATATGG GTTAATGAATACCCAGTCATGAAGTGGGGAATTGTATCGCTCATGCTGTTTATGATATTG CTTGGGTACGAGTGA
  • Download Fasta

  • Fasta :-

    MEFLKEQYNAIALEFKKNFRNPRDGICHVLNVVCLLLNALMIWKVLVVLTGCESPVVVVL SGSMEPGYFRGDTLALWHPPNIHAGDVVVYQINGRDIPIVHRILNIHISKDNKFHLLSKG DNNNIDDRGLYEPNQYWLENEHVLGLSVGYAPYIGMLTIWVNEYPVMKWGIVSLMLFMIL LGYE

  • title: Catalytic site
  • coordinates: S63,H101
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India