PcyM_1247100 | aspartyl proteinase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1247100SP0.0224650.9761430.001393CS pos: 21-22. VKS-AK. Pr: 0.8906
No Results

  • Fasta :-

    >PcyM_1247100 MNVLLSFFVFLILNVRPWVKSAKENLRVSRYNTAGISTIILKGGYINRQFIGEICIGSPP QAFKVLFDTGSTNLWIPSKNCHTKACQSKRKYDHRVSKNYKLVQKKNPVEVFFGTGKIQI AYVSDDVYLGDITVKNQEFGVASYISDDPFSDMQFDGLFGLGISDDKRRKTLIYDNIPRG RSKKNVFSIYYPKNVDDDGAITFGGYDKKFIQPNENIDWFDVSSRKYWAVKMIGLKINGL FLDVCSKNIGGYCEAVIDTGTSSIAGPKDDLILLTRLLNPRRNCHNRALLKRFSFLLSDE NGEQKEYELTPADYIVNSFRVDPILKSPCNFAFMPINISSANRYLYILGQIFLQKYYAIF EKDKMKIGLAKSV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1247100.fa Sequence name : PcyM_1247100 Sequence length : 373 VALUES OF COMPUTED PARAMETERS Coef20 : 4.709 CoefTot : -5.420 ChDiff : 15 ZoneTo : 124 KR : 19 DE : 5 CleavSite : 32 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.235 1.976 0.085 0.663 MesoH : -0.500 0.415 -0.342 0.217 MuHd_075 : 35.843 30.044 11.007 8.608 MuHd_095 : 41.497 24.342 11.707 8.096 MuHd_100 : 47.283 22.465 10.963 9.246 MuHd_105 : 51.645 25.838 11.958 10.872 Hmax_075 : 17.675 22.575 -2.100 7.887 Hmax_095 : 3.238 20.387 5.240 5.469 Hmax_100 : 7.300 21.400 -3.010 3.770 Hmax_105 : 7.300 11.317 0.262 3.770 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7248 0.2752 DFMC : 0.7393 0.2607
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 373 PcyM_1247100 MNVLLSFFVFLILNVRPWVKSAKENLRVSRYNTAGISTIILKGGYINRQFIGEICIGSPPQAFKVLFDTGSTNLWIPSKN 80 CHTKACQSKRKYDHRVSKNYKLVQKKNPVEVFFGTGKIQIAYVSDDVYLGDITVKNQEFGVASYISDDPFSDMQFDGLFG 160 LGISDDKRRKTLIYDNIPRGRSKKNVFSIYYPKNVDDDGAITFGGYDKKFIQPNENIDWFDVSSRKYWAVKMIGLKINGL 240 FLDVCSKNIGGYCEAVIDTGTSSIAGPKDDLILLTRLLNPRRNCHNRALLKRFSFLLSDENGEQKEYELTPADYIVNSFR 320 VDPILKSPCNFAFMPINISSANRYLYILGQIFLQKYYAIFEKDKMKIGLAKSV 400 ................................................................................ 80 ................................................................................ 160 .......................P........................................................ 240 ................................................................................ 320 ..................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_1247100 16 FLILNVR|PW 0.070 . PcyM_1247100 20 NVRPWVK|SA 0.095 . PcyM_1247100 23 PWVKSAK|EN 0.064 . PcyM_1247100 27 SAKENLR|VS 0.077 . PcyM_1247100 30 ENLRVSR|YN 0.379 . PcyM_1247100 42 ISTIILK|GG 0.061 . PcyM_1247100 48 KGGYINR|QF 0.094 . PcyM_1247100 64 SPPQAFK|VL 0.073 . PcyM_1247100 79 NLWIPSK|NC 0.066 . PcyM_1247100 84 SKNCHTK|AC 0.083 . PcyM_1247100 89 TKACQSK|RK 0.080 . PcyM_1247100 90 KACQSKR|KY 0.200 . PcyM_1247100 91 ACQSKRK|YD 0.103 . PcyM_1247100 95 KRKYDHR|VS 0.088 . PcyM_1247100 98 YDHRVSK|NY 0.142 . PcyM_1247100 101 RVSKNYK|LV 0.099 . PcyM_1247100 105 NYKLVQK|KN 0.060 . PcyM_1247100 106 YKLVQKK|NP 0.095 . PcyM_1247100 117 VFFGTGK|IQ 0.058 . PcyM_1247100 135 LGDITVK|NQ 0.063 . PcyM_1247100 167 LGISDDK|RR 0.052 . PcyM_1247100 168 GISDDKR|RK 0.154 . PcyM_1247100 169 ISDDKRR|KT 0.134 . PcyM_1247100 170 SDDKRRK|TL 0.073 . PcyM_1247100 179 IYDNIPR|GR 0.089 . PcyM_1247100 181 DNIPRGR|SK 0.137 . PcyM_1247100 183 IPRGRSK|KN 0.064 . PcyM_1247100 184 PRGRSKK|NV 0.563 *ProP* PcyM_1247100 193 FSIYYPK|NV 0.083 . PcyM_1247100 208 TFGGYDK|KF 0.060 . PcyM_1247100 209 FGGYDKK|FI 0.131 . PcyM_1247100 225 WFDVSSR|KY 0.091 . PcyM_1247100 226 FDVSSRK|YW 0.089 . PcyM_1247100 231 RKYWAVK|MI 0.095 . PcyM_1247100 236 VKMIGLK|IN 0.063 . PcyM_1247100 247 FLDVCSK|NI 0.065 . PcyM_1247100 268 SSIAGPK|DD 0.067 . PcyM_1247100 276 DLILLTR|LL 0.077 . PcyM_1247100 281 TRLLNPR|RN 0.087 . PcyM_1247100 282 RLLNPRR|NC 0.092 . PcyM_1247100 287 RRNCHNR|AL 0.148 . PcyM_1247100 291 HNRALLK|RF 0.066 . PcyM_1247100 292 NRALLKR|FS 0.173 . PcyM_1247100 305 DENGEQK|EY 0.063 . PcyM_1247100 320 YIVNSFR|VD 0.070 . PcyM_1247100 326 RVDPILK|SP 0.064 . PcyM_1247100 343 NISSANR|YL 0.118 . PcyM_1247100 355 GQIFLQK|YY 0.073 . PcyM_1247100 362 YYAIFEK|DK 0.082 . PcyM_1247100 364 AIFEKDK|MK 0.064 . PcyM_1247100 366 FEKDKMK|IG 0.062 . PcyM_1247100 371 MKIGLAK|SV 0.146 . ____________________________^_________________

  • Fasta :-

    >PcyM_1247100 ATGAATGTCTTGTTGTCCTTTTTTGTCTTTCTCATTTTAAATGTTCGCCCATGGGTGAAA TCTGCAAAAGAGAATTTAAGGGTATCCAGGTATAACACGGCAGGAATTTCCACCATCATT CTCAAGGGGGGTTACATCAACAGACAATTTATTGGAGAAATATGCATTGGAAGTCCCCCC CAGGCGTTCAAGGTCTTATTTGATACTGGAAGTACAAACTTGTGGATCCCATCGAAAAAC TGCCACACGAAGGCCTGCCAGAGCAAAAGAAAATACGATCACAGAGTTTCTAAAAATTAC AAATTAGTCCAGAAAAAGAACCCCGTGGAAGTTTTCTTCGGAACAGGCAAAATACAAATC GCTTACGTTTCTGATGATGTTTACTTGGGAGACATTACGGTAAAAAACCAGGAGTTTGGA GTAGCCAGTTACATATCCGATGACCCTTTTTCGGATATGCAATTCGATGGCCTATTCGGC CTAGGCATTTCAGATGATAAAAGGAGAAAAACGTTGATCTATGACAATATACCAAGGGGT CGGTCAAAAAAAAACGTGTTCTCGATTTACTACCCCAAAAATGTGGACGACGATGGCGCG ATAACCTTCGGGGGATACGATAAAAAATTTATCCAACCCAACGAGAACATCGACTGGTTT GACGTTTCGTCCAGAAAATACTGGGCAGTCAAAATGATAGGACTGAAAATAAATGGCTTA TTCCTAGACGTGTGTTCCAAAAATATAGGTGGCTACTGCGAAGCAGTCATTGATACAGGC ACATCGAGCATCGCTGGGCCCAAAGACGACTTAATTTTGTTAACTAGATTGCTAAACCCT AGGAGGAACTGCCATAACAGGGCATTACTAAAAAGATTTTCTTTCCTTTTAAGTGATGAA AATGGCGAACAAAAGGAGTACGAATTAACGCCAGCGGATTACATAGTTAACTCGTTCAGA GTCGACCCTATTTTGAAGTCCCCCTGCAACTTCGCCTTCATGCCAATTAACATTTCTTCG GCTAATAGATATTTATATATTCTTGGACAAATATTTTTGCAAAAGTATTATGCAATATTT GAAAAGGACAAAATGAAAATTGGCCTAGCTAAATCGGTGTGA
  • Download Fasta

  • Fasta :-

    MNVLLSFFVFLILNVRPWVKSAKENLRVSRYNTAGISTIILKGGYINRQFIGEICIGSPP QAFKVLFDTGSTNLWIPSKNCHTKACQSKRKYDHRVSKNYKLVQKKNPVEVFFGTGKIQI AYVSDDVYLGDITVKNQEFGVASYISDDPFSDMQFDGLFGLGISDDKRRKTLIYDNIPRG RSKKNVFSIYYPKNVDDDGAITFGGYDKKFIQPNENIDWFDVSSRKYWAVKMIGLKINGL FLDVCSKNIGGYCEAVIDTGTSSIAGPKDDLILLTRLLNPRRNCHNRALLKRFSFLLSDE NGEQKEYELTPADYIVNSFRVDPILKSPCNFAFMPINISSANRYLYILGQIFLQKYYAIF EKDKMKIGLAKSV

  • title: catalytic residue
  • coordinates: D68,D258
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1247100182 SPRGRSKKNV0.996unspPcyM_1247100182 SPRGRSKKNV0.996unspPcyM_1247100182 SPRGRSKKNV0.996unspPcyM_124710021 SPWVKSAKEN0.993unspPcyM_124710029 SNLRVSRYNT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India