PcyM_1262900 | DER1-like protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1262900SP0.0281350.9718100.000055CS pos: 21-22. SKA-NV. Pr: 0.7658
No Results

  • Fasta :-

    >PcyM_1262900 MNIVLCLIWILIYIADDGSKANVECKRQNDVNKANKIYSYSLLKGKVQDRNAHHRNFVLY KRRALFHIRIPRKNLERHNLFSNDLRYKKINKFLENKKTNKLCYLHISNNHHGIKKKRNK NKTLQLLFEKKKLLQEYFCNLKSSFMDRYRNTKIVTKLFLSSSLLMLTLNLIGVKPEDIA LHDKRIIRAFEFYRIVTSALFYGDISLYVLTNVYMLYVQSQELERSVGSSETLAFYLSQI SILSVICSYLKKPFYSTALLKSLLFVNCMLNPYQKSNLIFGINIYNIYLPYFSIFIDILH AQDLKASLSGILGVTSGSIYYLLNIYAYEKFNKKFFLIPRFLRNYLDSVSTDDVF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1262900.fa Sequence name : PcyM_1262900 Sequence length : 355 VALUES OF COMPUTED PARAMETERS Coef20 : 4.097 CoefTot : 0.216 ChDiff : 28 ZoneTo : 15 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.859 1.941 0.308 0.699 MesoH : 0.367 0.836 -0.128 0.401 MuHd_075 : 21.212 8.669 4.589 3.627 MuHd_095 : 21.085 19.962 7.353 4.376 MuHd_100 : 25.435 21.895 7.439 5.321 MuHd_105 : 22.431 19.197 5.494 4.810 Hmax_075 : 18.667 22.167 5.570 7.502 Hmax_095 : 19.100 27.100 5.593 8.120 Hmax_100 : 19.400 24.900 5.040 7.980 Hmax_105 : 18.800 22.300 4.205 7.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9224 0.0776 DFMC : 0.9367 0.0633
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 355 PcyM_1262900 MNIVLCLIWILIYIADDGSKANVECKRQNDVNKANKIYSYSLLKGKVQDRNAHHRNFVLYKRRALFHIRIPRKNLERHNL 80 FSNDLRYKKINKFLENKKTNKLCYLHISNNHHGIKKKRNKNKTLQLLFEKKKLLQEYFCNLKSSFMDRYRNTKIVTKLFL 160 SSSLLMLTLNLIGVKPEDIALHDKRIIRAFEFYRIVTSALFYGDISLYVLTNVYMLYVQSQELERSVGSSETLAFYLSQI 240 SILSVICSYLKKPFYSTALLKSLLFVNCMLNPYQKSNLIFGINIYNIYLPYFSIFIDILHAQDLKASLSGILGVTSGSIY 320 YLLNIYAYEKFNKKFFLIPRFLRNYLDSVSTDDVF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1262900 20 IADDGSK|AN 0.057 . PcyM_1262900 26 KANVECK|RQ 0.072 . PcyM_1262900 27 ANVECKR|QN 0.166 . PcyM_1262900 33 RQNDVNK|AN 0.073 . PcyM_1262900 36 DVNKANK|IY 0.067 . PcyM_1262900 44 YSYSLLK|GK 0.060 . PcyM_1262900 46 YSLLKGK|VQ 0.061 . PcyM_1262900 50 KGKVQDR|NA 0.109 . PcyM_1262900 55 DRNAHHR|NF 0.096 . PcyM_1262900 61 RNFVLYK|RR 0.057 . PcyM_1262900 62 NFVLYKR|RA 0.125 . PcyM_1262900 63 FVLYKRR|AL 0.137 . PcyM_1262900 69 RALFHIR|IP 0.086 . PcyM_1262900 72 FHIRIPR|KN 0.149 . PcyM_1262900 73 HIRIPRK|NL 0.092 . PcyM_1262900 77 PRKNLER|HN 0.081 . PcyM_1262900 86 LFSNDLR|YK 0.094 . PcyM_1262900 88 SNDLRYK|KI 0.069 . PcyM_1262900 89 NDLRYKK|IN 0.170 . PcyM_1262900 92 RYKKINK|FL 0.071 . PcyM_1262900 97 NKFLENK|KT 0.057 . PcyM_1262900 98 KFLENKK|TN 0.070 . PcyM_1262900 101 ENKKTNK|LC 0.060 . PcyM_1262900 115 NNHHGIK|KK 0.069 . PcyM_1262900 116 NHHGIKK|KR 0.087 . PcyM_1262900 117 HHGIKKK|RN 0.109 . PcyM_1262900 118 HGIKKKR|NK 0.239 . PcyM_1262900 120 IKKKRNK|NK 0.069 . PcyM_1262900 122 KKRNKNK|TL 0.077 . PcyM_1262900 130 LQLLFEK|KK 0.054 . PcyM_1262900 131 QLLFEKK|KL 0.088 . PcyM_1262900 132 LLFEKKK|LL 0.102 . PcyM_1262900 142 EYFCNLK|SS 0.060 . PcyM_1262900 148 KSSFMDR|YR 0.151 . PcyM_1262900 150 SFMDRYR|NT 0.097 . PcyM_1262900 153 DRYRNTK|IV 0.211 . PcyM_1262900 157 NTKIVTK|LF 0.056 . PcyM_1262900 175 LNLIGVK|PE 0.065 . PcyM_1262900 184 DIALHDK|RI 0.067 . PcyM_1262900 185 IALHDKR|II 0.227 . PcyM_1262900 188 HDKRIIR|AF 0.256 . PcyM_1262900 194 RAFEFYR|IV 0.131 . PcyM_1262900 225 QSQELER|SV 0.281 . PcyM_1262900 251 VICSYLK|KP 0.053 . PcyM_1262900 252 ICSYLKK|PF 0.087 . PcyM_1262900 261 YSTALLK|SL 0.075 . PcyM_1262900 275 MLNPYQK|SN 0.078 . PcyM_1262900 305 LHAQDLK|AS 0.061 . PcyM_1262900 330 NIYAYEK|FN 0.059 . PcyM_1262900 333 AYEKFNK|KF 0.062 . PcyM_1262900 334 YEKFNKK|FF 0.079 . PcyM_1262900 340 KFFLIPR|FL 0.113 . PcyM_1262900 343 LIPRFLR|NY 0.209 . ____________________________^_________________

  • Fasta :-

    >PcyM_1262900 ATGAACATTGTGTTGTGCCTAATTTGGATCCTTATATATATAGCTGACGACGGAAGTAAG GCAAATGTGGAGTGCAAAAGACAGAATGACGTAAACAAAGCGAATAAGATCTACTCGTAC AGCCTATTGAAGGGTAAAGTACAGGATCGAAATGCACACCATCGGAATTTTGTACTTTAT AAGAGACGAGCACTGTTCCATATACGCATCCCGAGGAAGAACCTGGAGAGGCACAACCTA TTCAGCAATGATCTCCGTTATAAAAAAATTAACAAATTTTTGGAAAATAAAAAGACAAAC AAGTTGTGTTATTTACATATAAGTAATAACCATCATGGAATAAAAAAAAAGAGGAATAAA AACAAAACTTTGCAACTGTTGTTTGAAAAAAAAAAGTTGCTGCAAGAATATTTTTGCAAC TTAAAATCATCCTTTATGGATAGATATAGAAACACAAAAATTGTAACGAAGCTTTTTTTA TCGTCCTCTTTGTTGATGCTAACCCTTAACCTCATTGGAGTAAAACCAGAAGACATCGCT CTACACGATAAAAGAATAATCAGAGCATTTGAATTTTACAGAATTGTAACATCAGCATTG TTTTATGGTGACATATCACTATACGTGTTAACAAATGTTTATATGTTATATGTGCAGAGT CAGGAGTTGGAAAGGTCCGTGGGTTCATCTGAAACGCTGGCTTTTTATTTGTCCCAAATT TCTATCCTCTCCGTAATTTGCTCCTACTTGAAGAAGCCCTTCTATTCAACAGCACTGCTG AAATCGCTGCTCTTTGTAAACTGTATGTTAAATCCTTATCAGAAATCTAACTTAATTTTT GGGATAAATATTTACAATATTTACTTACCCTATTTCTCCATCTTTATTGATATTTTGCAT GCACAAGATTTGAAAGCTTCCCTGTCGGGGATACTGGGGGTGACCAGTGGGTCCATTTAC TACCTTTTGAATATTTACGCGTATGAAAAATTCAACAAAAAGTTTTTTCTAATTCCGCGT TTTTTGAGGAATTATCTCGATTCGGTGAGCACGGACGATGTGTTCTAG
  • Download Fasta

  • Fasta :-

    MNIVLCLIWILIYIADDGSKANVECKRQNDVNKANKIYSYSLLKGKVQDRNAHHRNFVLY KRRALFHIRIPRKNLERHNLFSNDLRYKKINKFLENKKTNKLCYLHISNNHHGIKKKRNK NKTLQLLFEKKKLLQEYFCNLKSSFMDRYRNTKIVTKLFLSSSLLMLTLNLIGVKPEDIA LHDKRIIRAFEFYRIVTSALFYGDISLYVLTNVYMLYVQSQELERSVGSSETLAFYLSQI SILSVICSYLKKPFYSTALLKSLLFVNCMLNPYQKSNLIFGINIYNIYLPYFSIFIDILH AQDLKASLSGILGVTSGSIYYLLNIYAYEKFNKKFFLIPRFLRNYLDSVSTDDVF

    No Results
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India