PcyM_1328100 | enoyl-CoA hydratase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      

  • Computed_GO_Functions:  catalytic activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1328100mTP0.2048900.0000890.795021CS pos: 35-36. RRH-KS. Pr: 0.3684
No Results

  • Fasta :-

    >PcyM_1328100 MLTRRSPFSKLLSSRTAHAVFRGGLPKLASLSRRHKSSTNQSQDVPTKETSNQHFSHHKY VDFYRDESMSVGIVTFRNSINGKKNIFGDFLEELKNVIEHITNVISNEETNAFYIKEFPR RESYLVKNLRNRIPYLDNRLKVLIFSWGSGQSEGGAAAISASTTAGTTSSTTAGITSSTT ANPTAAPPASTPDYNSFLKNDEQLNVQLANSFRYLCNTIQHLPLITISSINGQCYNSAMD LMISTDFKLSCEGSTFGFNKAHLGLFPYGGSTQKLFRAIPMSYAKYLLLTGDMISAKDAL RINLIDICMNKNEDFFIDNCCVHFDTSLTKKQKVEIIQKNVVSFFQDIFSNELFHGQTKD SCFVFSLFFAFQFLFIPTNSLQSIKMSIMEGMSLAEPNLYLDHDRAVFERNMNAPQRGEI LAYLKRRASGAPAVPT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1328100.fa Sequence name : PcyM_1328100 Sequence length : 436 VALUES OF COMPUTED PARAMETERS Coef20 : 4.970 CoefTot : 0.706 ChDiff : 8 ZoneTo : 43 KR : 9 DE : 0 CleavSite : 36 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.253 1.976 0.325 0.768 MesoH : 0.025 0.408 -0.257 0.267 MuHd_075 : 43.285 23.255 10.002 10.416 MuHd_095 : 38.415 24.174 9.967 9.170 MuHd_100 : 32.173 20.744 7.363 8.026 MuHd_105 : 30.848 18.483 7.130 7.081 Hmax_075 : 13.125 10.500 1.519 4.040 Hmax_095 : 15.100 15.200 2.702 5.420 Hmax_100 : 15.300 15.200 2.702 5.420 Hmax_105 : 7.350 8.167 -1.383 3.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0037 0.9963 DFMC : 0.0040 0.9960 This protein is probably imported in mitochondria. f(Ser) = 0.2093 f(Arg) = 0.1395 CMi = 0.78878 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 436 PcyM_1328100 MLTRRSPFSKLLSSRTAHAVFRGGLPKLASLSRRHKSSTNQSQDVPTKETSNQHFSHHKYVDFYRDESMSVGIVTFRNSI 80 NGKKNIFGDFLEELKNVIEHITNVISNEETNAFYIKEFPRRESYLVKNLRNRIPYLDNRLKVLIFSWGSGQSEGGAAAIS 160 ASTTAGTTSSTTAGITSSTTANPTAAPPASTPDYNSFLKNDEQLNVQLANSFRYLCNTIQHLPLITISSINGQCYNSAMD 240 LMISTDFKLSCEGSTFGFNKAHLGLFPYGGSTQKLFRAIPMSYAKYLLLTGDMISAKDALRINLIDICMNKNEDFFIDNC 320 CVHFDTSLTKKQKVEIIQKNVVSFFQDIFSNELFHGQTKDSCFVFSLFFAFQFLFIPTNSLQSIKMSIMEGMSLAEPNLY 400 LDHDRAVFERNMNAPQRGEILAYLKRRASGAPAVPT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1328100 4 ---MLTR|RS 0.067 . PcyM_1328100 5 --MLTRR|SP 0.199 . PcyM_1328100 10 RRSPFSK|LL 0.091 . PcyM_1328100 15 SKLLSSR|TA 0.145 . PcyM_1328100 22 TAHAVFR|GG 0.130 . PcyM_1328100 27 FRGGLPK|LA 0.081 . PcyM_1328100 33 KLASLSR|RH 0.080 . PcyM_1328100 34 LASLSRR|HK 0.221 . PcyM_1328100 36 SLSRRHK|SS 0.328 . PcyM_1328100 48 SQDVPTK|ET 0.080 . PcyM_1328100 59 QHFSHHK|YV 0.100 . PcyM_1328100 65 KYVDFYR|DE 0.121 . PcyM_1328100 77 VGIVTFR|NS 0.085 . PcyM_1328100 83 RNSINGK|KN 0.074 . PcyM_1328100 84 NSINGKK|NI 0.093 . PcyM_1328100 95 DFLEELK|NV 0.062 . PcyM_1328100 116 TNAFYIK|EF 0.068 . PcyM_1328100 120 YIKEFPR|RE 0.083 . PcyM_1328100 121 IKEFPRR|ES 0.119 . PcyM_1328100 127 RESYLVK|NL 0.073 . PcyM_1328100 130 YLVKNLR|NR 0.085 . PcyM_1328100 132 VKNLRNR|IP 0.073 . PcyM_1328100 139 IPYLDNR|LK 0.076 . PcyM_1328100 141 YLDNRLK|VL 0.057 . PcyM_1328100 199 DYNSFLK|ND 0.067 . PcyM_1328100 213 QLANSFR|YL 0.122 . PcyM_1328100 248 MISTDFK|LS 0.070 . PcyM_1328100 260 STFGFNK|AH 0.066 . PcyM_1328100 274 YGGSTQK|LF 0.063 . PcyM_1328100 277 STQKLFR|AI 0.101 . PcyM_1328100 285 IPMSYAK|YL 0.070 . PcyM_1328100 297 GDMISAK|DA 0.085 . PcyM_1328100 301 SAKDALR|IN 0.074 . PcyM_1328100 311 IDICMNK|NE 0.058 . PcyM_1328100 330 FDTSLTK|KQ 0.058 . PcyM_1328100 331 DTSLTKK|QK 0.104 . PcyM_1328100 333 SLTKKQK|VE 0.064 . PcyM_1328100 339 KVEIIQK|NV 0.062 . PcyM_1328100 359 LFHGQTK|DS 0.075 . PcyM_1328100 385 NSLQSIK|MS 0.069 . PcyM_1328100 405 LYLDHDR|AV 0.113 . PcyM_1328100 410 DRAVFER|NM 0.117 . PcyM_1328100 417 NMNAPQR|GE 0.084 . PcyM_1328100 425 EILAYLK|RR 0.053 . PcyM_1328100 426 ILAYLKR|RA 0.223 . PcyM_1328100 427 LAYLKRR|AS 0.180 . ____________________________^_________________

  • Fasta :-

    >PcyM_1328100 ATGCTCACGCGGAGGAGCCCCTTTTCGAAGCTGCTGAGCAGCAGGACGGCGCATGCCGTC TTTAGAGGAGGTCTCCCCAAGTTAGCTTCTCTTTCCAGACGGCACAAAAGCAGTACCAAC CAATCGCAAGACGTACCCACGAAGGAGACAAGCAATCAACACTTTAGTCACCACAAGTAT GTGGATTTCTACCGAGATGAATCAATGAGCGTTGGTATAGTAACCTTTAGAAATAGCATT AATGGTAAAAAAAATATTTTTGGAGATTTTCTGGAAGAGCTGAAAAATGTCATCGAGCAT ATCACCAATGTCATATCGAATGAAGAGACGAACGCTTTTTACATAAAAGAATTTCCACGG AGAGAAAGCTACTTGGTGAAAAATTTGCGAAACAGGATTCCTTACTTGGACAACAGATTG AAGGTGCTCATCTTTAGCTGGGGGAGTGGGCAGTCGGAGGGTGGTGCGGCTGCCATCAGT GCTAGCACCACCGCGGGTACCACCTCTAGCACCACCGCGGGTATCACCTCTAGCACCACC GCGAACCCCACCGCTGCCCCCCCCGCTAGCACCCCCGACTATAACTCCTTCCTGAAGAAC GACGAGCAGCTGAACGTGCAACTAGCCAATTCATTCCGCTACCTATGCAACACCATCCAG CATCTGCCCCTAATCACAATCAGCAGCATCAACGGTCAGTGCTACAACAGCGCAATGGAT CTCATGATCTCCACGGATTTCAAATTGTCATGTGAAGGAAGTACCTTCGGTTTTAATAAG GCACATCTGGGATTATTTCCCTACGGAGGAAGTACTCAAAAATTATTTCGAGCCATTCCA ATGAGTTATGCAAAGTATCTCCTACTTACGGGAGACATGATAAGTGCCAAGGATGCGTTG AGGATTAACCTAATAGATATATGTATGAATAAAAATGAGGACTTTTTTATTGACAACTGT TGTGTTCACTTTGATACGAGTTTGACAAAAAAGCAGAAGGTGGAGATTATACAAAAAAAT GTTGTATCTTTTTTTCAGGATATTTTTTCTAATGAATTATTTCATGGCCAAACAAAGGAC AGCTGTTTTGTTTTCTCCCTTTTTTTTGCTTTTCAATTTTTATTCATTCCTACCAACTCT CTACAGAGTATCAAAATGAGCATCATGGAGGGCATGTCGCTCGCCGAGCCAAACTTGTAT TTGGATCACGACAGGGCTGTCTTTGAGCGCAACATGAACGCTCCTCAGAGGGGAGAGATT CTCGCCTACTTGAAGCGGAGAGCTAGCGGCGCGCCCGCAGTGCCCACCTAG
  • Download Fasta

  • Fasta :-

    MLTRRSPFSKLLSSRTAHAVFRGGLPKLASLSRRHKSSTNQSQDVPTKETSNQHFSHHKY VDFYRDESMSVGIVTFRNSINGKKNIFGDFLEELKNVIEHITNVISNEETNAFYIKEFPR RESYLVKNLRNRIPYLDNRLKVLIFSWGSGQSEGGAAAISASTTAGTTSSTTAGITSSTT ANPTAAPPASTPDYNSFLKNDEQLNVQLANSFRYLCNTIQHLPLITISSINGQCYNSAMD LMISTDFKLSCEGSTFGFNKAHLGLFPYGGSTQKLFRAIPMSYAKYLLLTGDMISAKDAL RINLIDICMNKNEDFFIDNCCVHFDTSLTKKQKVEIIQKNVVSFFQDIFSNELFHGQTKD SCFVFSLFFAFQFLFIPTNSLQSIKMSIMEGMSLAEPNLYLDHDRAVFERNMNAPQRGEI LAYLKRRASGAPAVPT

  • title: trimer interface
  • coordinates: N217,I225,D246,F247,K248,L249,A261,H262,L263,G264,G270,T272,Q273,K274,F276,R277,S282,Y283,K285,Y286,L288,L289,D292,N303,D306
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1328100383 SNSLQSIKMS0.993unspPcyM_1328100383 SNSLQSIKMS0.993unspPcyM_1328100383 SNSLQSIKMS0.993unspPcyM_1328100429 SKRRASGAPA0.993unspPcyM_132810037 SRRHKSSTNQ0.991unspPcyM_1328100295 SGDMISAKDA0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India