PcyM_1347000 | DNA damage-inducible protein 1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1347000OTHER0.9999690.0000310.000000
No Results

  • Fasta :-

    >PcyM_1347000 MVFITISDDSKIITSLDVHEDTEIFTIINIIENDFELNMNENELTYNGAPLNKFDTVKKL NINEGDLLFVRKKLSLDLMPQGNSSTQAQMAAAGVGAPSTSTGTGIAPSGGSGMNANSFN NAGGINNAAFNALMEHFRTVQENEYIKKETEILLNLKNDRARMGVLQLQDKQLYDAINSQ NVEEVKKFVKEKLENEKKEKEREQRMYENALKDPLSEDAQKYIYENIYKNQINSNLALAQ EHFPEAFGVVYMLYIPVEINKNVVHAFVDSGAQSSIMSKQCAEKCNILRLMDRRFTGIAK GVGTKSILGKIHMVDIKIGNYFYAVSLTIIDEYDIDFIFGLDLLRRHQCQIDLKKNALVI EDNEIPFLPEKDIIANSSHSIDFDATKESTGGA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1347000.fa Sequence name : PcyM_1347000 Sequence length : 393 VALUES OF COMPUTED PARAMETERS Coef20 : 3.928 CoefTot : 0.112 ChDiff : -15 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.418 1.265 0.161 0.625 MesoH : -0.108 0.371 -0.349 0.196 MuHd_075 : 9.122 8.608 0.517 2.597 MuHd_095 : 6.452 4.855 1.402 1.779 MuHd_100 : 3.910 8.368 2.376 2.807 MuHd_105 : 10.484 12.250 4.382 3.960 Hmax_075 : 11.783 13.500 0.820 4.700 Hmax_095 : 6.737 13.300 1.143 4.436 Hmax_100 : 7.000 17.300 1.871 5.450 Hmax_105 : 7.117 21.000 2.280 6.417 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9244 0.0756 DFMC : 0.9362 0.0638
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 393 PcyM_1347000 MVFITISDDSKIITSLDVHEDTEIFTIINIIENDFELNMNENELTYNGAPLNKFDTVKKLNINEGDLLFVRKKLSLDLMP 80 QGNSSTQAQMAAAGVGAPSTSTGTGIAPSGGSGMNANSFNNAGGINNAAFNALMEHFRTVQENEYIKKETEILLNLKNDR 160 ARMGVLQLQDKQLYDAINSQNVEEVKKFVKEKLENEKKEKEREQRMYENALKDPLSEDAQKYIYENIYKNQINSNLALAQ 240 EHFPEAFGVVYMLYIPVEINKNVVHAFVDSGAQSSIMSKQCAEKCNILRLMDRRFTGIAKGVGTKSILGKIHMVDIKIGN 320 YFYAVSLTIIDEYDIDFIFGLDLLRRHQCQIDLKKNALVIEDNEIPFLPEKDIIANSSHSIDFDATKESTGGA 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1347000 11 TISDDSK|II 0.070 . PcyM_1347000 53 NGAPLNK|FD 0.064 . PcyM_1347000 58 NKFDTVK|KL 0.073 . PcyM_1347000 59 KFDTVKK|LN 0.088 . PcyM_1347000 71 GDLLFVR|KK 0.064 . PcyM_1347000 72 DLLFVRK|KL 0.083 . PcyM_1347000 73 LLFVRKK|LS 0.095 . PcyM_1347000 138 ALMEHFR|TV 0.140 . PcyM_1347000 147 QENEYIK|KE 0.062 . PcyM_1347000 148 ENEYIKK|ET 0.111 . PcyM_1347000 157 EILLNLK|ND 0.054 . PcyM_1347000 160 LNLKNDR|AR 0.088 . PcyM_1347000 162 LKNDRAR|MG 0.106 . PcyM_1347000 171 VLQLQDK|QL 0.074 . PcyM_1347000 186 QNVEEVK|KF 0.060 . PcyM_1347000 187 NVEEVKK|FV 0.165 . PcyM_1347000 190 EVKKFVK|EK 0.059 . PcyM_1347000 192 KKFVKEK|LE 0.068 . PcyM_1347000 197 EKLENEK|KE 0.055 . PcyM_1347000 198 KLENEKK|EK 0.121 . PcyM_1347000 200 ENEKKEK|ER 0.065 . PcyM_1347000 202 EKKEKER|EQ 0.108 . PcyM_1347000 205 EKEREQR|MY 0.377 . PcyM_1347000 212 MYENALK|DP 0.061 . PcyM_1347000 221 LSEDAQK|YI 0.069 . PcyM_1347000 229 IYENIYK|NQ 0.057 . PcyM_1347000 261 IPVEINK|NV 0.076 . PcyM_1347000 279 QSSIMSK|QC 0.068 . PcyM_1347000 284 SKQCAEK|CN 0.065 . PcyM_1347000 289 EKCNILR|LM 0.081 . PcyM_1347000 293 ILRLMDR|RF 0.090 . PcyM_1347000 294 LRLMDRR|FT 0.226 . PcyM_1347000 300 RFTGIAK|GV 0.085 . PcyM_1347000 305 AKGVGTK|SI 0.097 . PcyM_1347000 310 TKSILGK|IH 0.084 . PcyM_1347000 317 IHMVDIK|IG 0.058 . PcyM_1347000 345 FGLDLLR|RH 0.061 . PcyM_1347000 346 GLDLLRR|HQ 0.118 . PcyM_1347000 354 QCQIDLK|KN 0.059 . PcyM_1347000 355 CQIDLKK|NA 0.122 . PcyM_1347000 371 IPFLPEK|DI 0.074 . PcyM_1347000 387 IDFDATK|ES 0.064 . ____________________________^_________________

  • Fasta :-

    >PcyM_1347000 ATGGTCTTCATCACCATCTCCGACGACAGCAAGATCATAACCAGCCTGGACGTGCACGAA GACACGGAAATTTTCACCATCATCAACATTATCGAAAATGACTTCGAGCTAAATATGAAC GAAAACGAATTGACATACAACGGGGCCCCCTTGAACAAGTTCGACACGGTGAAGAAGCTG AACATAAATGAAGGGGACCTGCTCTTTGTGAGGAAGAAGTTGAGTCTGGATTTGATGCCC CAAGGGAATTCTAGCACTCAGGCACAAATGGCAGCAGCAGGAGTAGGGGCGCCTTCCACC TCCACAGGGACTGGAATCGCGCCCAGTGGTGGTAGCGGCATGAACGCAAACAGTTTTAAC AACGCGGGAGGAATAAACAATGCAGCGTTTAATGCACTGATGGAGCATTTCCGCACCGTT CAAGAAAACGAATACATAAAAAAAGAAACCGAAATTTTACTAAACTTAAAAAATGACAGA GCGAGGATGGGTGTCCTACAATTACAAGACAAACAATTGTATGATGCTATAAATAGCCAA AATGTAGAAGAAGTAAAAAAATTTGTAAAAGAAAAATTGGAAAATGAAAAAAAAGAGAAA GAAAGAGAACAACGTATGTACGAAAATGCATTGAAAGATCCACTCTCAGAAGATGCACAA AAATACATTTATGAAAATATTTACAAAAATCAAATAAACTCAAACTTGGCATTAGCTCAG GAACATTTCCCAGAAGCATTTGGGGTTGTTTACATGTTATACATTCCTGTTGAAATAAAT AAAAATGTGGTGCATGCTTTTGTGGATTCGGGGGCGCAGTCAAGTATCATGTCCAAGCAG TGTGCAGAAAAATGCAACATTTTGAGATTAATGGATAGGAGATTTACAGGAATTGCCAAA GGAGTTGGTACCAAATCCATTTTGGGGAAAATACACATGGTCGACATTAAAATTGGAAAC TATTTCTACGCCGTTTCGTTAACCATTATTGATGAGTATGACATTGATTTTATATTCGGC TTGGATTTGTTGAGGAGACACCAGTGCCAGATCGACTTGAAGAAAAATGCCCTCGTTATT GAGGATAATGAAATTCCATTCTTGCCGGAGAAGGACATCATTGCGAATTCATCCCACAGC ATTGACTTCGATGCCACGAAGGAGTCTACGGGGGGGGCTTAG
  • Download Fasta

  • Fasta :-

    MVFITISDDSKIITSLDVHEDTEIFTIINIIENDFELNMNENELTYNGAPLNKFDTVKKL NINEGDLLFVRKKLSLDLMPQGNSSTQAQMAAAGVGAPSTSTGTGIAPSGGSGMNANSFN NAGGINNAAFNALMEHFRTVQENEYIKKETEILLNLKNDRARMGVLQLQDKQLYDAINSQ NVEEVKKFVKEKLENEKKEKEREQRMYENALKDPLSEDAQKYIYENIYKNQINSNLALAQ EHFPEAFGVVYMLYIPVEINKNVVHAFVDSGAQSSIMSKQCAEKCNILRLMDRRFTGIAK GVGTKSILGKIHMVDIKIGNYFYAVSLTIIDEYDIDFIFGLDLLRRHQCQIDLKKNALVI EDNEIPFLPEKDIIANSSHSIDFDATKESTGGA

  • title: catalytic motif
  • coordinates: D269,S270,G271
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India