PcyM_1348200 | plasmepsin IV, putative

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PcyM_1348200OTHER0.9999650.0000040.000031
No Results

  • Fasta :-

    >PcyM_1348200 MDIAVKEQDYSNGLIKNSAAFENLKFSNIKNFKVQKRFQILYFILFVFVTGIFFFFLIST YFFTPSYKVNKIVQNTEHLTLAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQN YLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCTSSGCSIKNL YDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPIYSS VEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPIHDVHAGYLTIGGIEEKF YEGNITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVI KVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPLLDVDDTLCMITMLPVDIDSN TFILGDPFMRKYFTIFDYDKESVGFAIAKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1348200.fa Sequence name : PcyM_1348200 Sequence length : 450 VALUES OF COMPUTED PARAMETERS Coef20 : 3.462 CoefTot : 0.000 ChDiff : -13 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.871 2.776 0.503 1.041 MesoH : -0.272 0.510 -0.391 0.286 MuHd_075 : 33.119 22.849 10.947 6.645 MuHd_095 : 21.533 12.441 6.521 3.556 MuHd_100 : 31.692 15.802 8.470 4.787 MuHd_105 : 32.990 14.906 8.077 4.762 Hmax_075 : 2.800 11.200 -0.125 4.200 Hmax_095 : 3.600 9.500 0.152 3.420 Hmax_100 : 3.600 9.500 0.152 3.420 Hmax_105 : -0.175 2.975 -2.185 2.170 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9546 0.0454 DFMC : 0.9463 0.0537
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 450 PcyM_1348200 MDIAVKEQDYSNGLIKNSAAFENLKFSNIKNFKVQKRFQILYFILFVFVTGIFFFFLISTYFFTPSYKVNKIVQNTEHLT 80 LAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQNYLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGS 160 ANLWVPSKKCTSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPIYSS 240 VEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPIHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDL 320 DVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPL 400 LDVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTIFDYDKESVGFAIAKN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1348200 6 -MDIAVK|EQ 0.055 . PcyM_1348200 16 YSNGLIK|NS 0.069 . PcyM_1348200 25 AAFENLK|FS 0.061 . PcyM_1348200 30 LKFSNIK|NF 0.062 . PcyM_1348200 33 SNIKNFK|VQ 0.058 . PcyM_1348200 36 KNFKVQK|RF 0.062 . PcyM_1348200 37 NFKVQKR|FQ 0.189 . PcyM_1348200 68 FFTPSYK|VN 0.062 . PcyM_1348200 71 PSYKVNK|IV 0.094 . PcyM_1348200 84 HLTLAFK|IE 0.057 . PcyM_1348200 87 LAFKIER|PY 0.117 . PcyM_1348200 91 IERPYDK|VL 0.064 . PcyM_1348200 94 PYDKVLK|TI 0.064 . PcyM_1348200 98 VLKTISK|KN 0.055 . PcyM_1348200 99 LKTISKK|NL 0.098 . PcyM_1348200 102 ISKKNLK|NY 0.065 . PcyM_1348200 106 NLKNYIK|ET 0.066 . PcyM_1348200 113 ETFNFFK|SG 0.084 . PcyM_1348200 118 FKSGYMK|QN 0.069 . PcyM_1348200 151 VGDNHQK|FM 0.060 . PcyM_1348200 168 NLWVPSK|KC 0.063 . PcyM_1348200 169 LWVPSKK|CT 0.136 . PcyM_1348200 178 SSGCSIK|NL 0.075 . PcyM_1348200 185 NLYDSSK|SK 0.095 . PcyM_1348200 187 YDSSKSK|SY 0.117 . PcyM_1348200 191 KSKSYEK|DG 0.071 . PcyM_1348200 195 YEKDGTK|VD 0.058 . PcyM_1348200 206 YGSGTVK|GF 0.071 . PcyM_1348200 211 VKGFFSK|DL 0.081 . PcyM_1348200 224 HLSMPYK|FI 0.093 . PcyM_1348200 252 ILGLGWK|DL 0.072 . PcyM_1348200 267 PIVVELK|NQ 0.061 . PcyM_1348200 271 ELKNQNK|ID 0.062 . PcyM_1348200 299 IGGIEEK|FY 0.073 . PcyM_1348200 309 GNITYEK|LN 0.060 . PcyM_1348200 326 LDVHFGK|QT 0.086 . PcyM_1348200 331 GKQTMEK|AN 0.070 . PcyM_1348200 352 PSEFLNK|FF 0.059 . PcyM_1348200 361 ANLNVIK|VP 0.055 . PcyM_1348200 375 VTTCDNK|EM 0.055 . PcyM_1348200 383 MPTLEFK|SA 0.080 . PcyM_1348200 430 LGDPFMR|KY 0.092 . PcyM_1348200 431 GDPFMRK|YF 0.080 . PcyM_1348200 440 TIFDYDK|ES 0.054 . PcyM_1348200 449 VGFAIAK|N- 0.067 . ____________________________^_________________

  • Fasta :-

    >PcyM_1348200 ATGGATATAGCAGTGAAGGAGCAAGATTACTCCAACGGACTTATAAAAAACTCAGCTGCG TTTGAAAATTTGAAATTTAGCAATATCAAAAATTTTAAAGTTCAGAAGAGATTCCAAATA CTCTATTTCATTCTGTTTGTTTTTGTTACGGGGATTTTTTTCTTCTTTCTAATTAGTACC TATTTTTTTACCCCAAGTTATAAAGTTAACAAAATTGTACAGAACACGGAACATTTAACT TTAGCTTTTAAAATCGAGAGACCCTATGACAAGGTATTAAAAACTATCTCCAAGAAAAAT CTGAAGAATTACATTAAGGAAACGTTTAACTTTTTCAAATCTGGATATATGAAACAGAAC TATTTAGGAAGTGAAAATGATGTGATCGAATTAGATGATGTAGCAAACATTATGTTTTAT GGAGAAGGAGAAGTTGGAGACAATCACCAAAAGTTCATGCTCATCTTTGACACGGGTTCA GCCAACTTGTGGGTCCCAAGTAAGAAATGTACTAGCAGCGGATGCAGCATTAAAAACCTG TACGACTCAAGCAAGTCCAAGTCATACGAGAAGGATGGAACCAAAGTTGATATCACTTAC GGATCTGGAACTGTAAAAGGTTTCTTCAGTAAAGATTTAGTAACTTTGGGACATTTATCC ATGCCATACAAATTTATTGAAGTCACCGACACTGATGATTTAGAACCCATTTACAGTAGC GTCGAGTTTGATGGAATATTAGGTTTAGGATGGAAAGATCTCTCCATTGGATCCATTGAT CCCATCGTTGTAGAGTTAAAGAACCAAAACAAAATCGACAATGCTTTGTTCACCTTCTAC CTACCTATCCATGATGTCCATGCTGGTTACCTAACCATTGGTGGTATTGAAGAAAAATTT TACGAAGGAAACATCACCTATGAAAAATTAAATCACGACTTGTACTGGCAAATTGACTTA GATGTACATTTTGGAAAGCAAACTATGGAAAAGGCCAACGTCATCGTTGATAGTGGCACA ACAACTATTACCGCCCCTTCAGAATTTCTAAACAAATTTTTTGCTAACCTAAATGTTATT AAAGTTCCCTTCTTGCCATTTTACGTAACTACTTGTGATAACAAGGAAATGCCAACCCTT GAATTTAAATCAGCCAACAACACCTACACTTTAGAACCCGAATATTACATGAACCCACTT CTCGATGTGGATGACACCTTGTGTATGATTACAATGCTACCAGTCGACATTGATTCGAAC ACCTTCATTTTGGGAGACCCATTCATGAGAAAATACTTCACCATTTTTGACTACGACAAG GAGAGTGTCGGTTTTGCCATTGCTAAGAACTGA
  • Download Fasta

  • Fasta :-

    MDIAVKEQDYSNGLIKNSAAFENLKFSNIKNFKVQKRFQILYFILFVFVTGIFFFFLIST YFFTPSYKVNKIVQNTEHLTLAFKIERPYDKVLKTISKKNLKNYIKETFNFFKSGYMKQN YLGSENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCTSSGCSIKNL YDSSKSKSYEKDGTKVDITYGSGTVKGFFSKDLVTLGHLSMPYKFIEVTDTDDLEPIYSS VEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPIHDVHAGYLTIGGIEEKF YEGNITYEKLNHDLYWQIDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVI KVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYMNPLLDVDDTLCMITMLPVDIDSN TFILGDPFMRKYFTIFDYDKESVGFAIAKN

  • title: catalytic residue
  • coordinates: D157,D337
No Results
No Results
IDSitePeptideScoreMethod
PcyM_1348200188 SSKSKSYEKD0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India