PcyM_1447800 | ataxin-3, putative

_IDPredictionOTHERSPmTPCS_Position
PcyM_1447800OTHER0.9998350.0000460.000119
No Results

  • Fasta :-

    >PcyM_1447800 MSKKYVYWEKQGNDRMCGLHCINAILQGPHYSEDVLATIGREIDEKEREFLKCSGGAGGS GMNDLMRKNSSNVLDDGFINISVLIECLRRKNISVKNTFQEDLKKIISSDHQDIGYICNL EQHWFGIRKIYNTWYVLDSLKSGPLYIKDINLKYYFNDIINKYHVFSVQNMNPYVSLPKA DVNFLPKNPNQFYLCTSQISEISGVSSNGFIMEERVNSGSRGEKGSFFPSGGYDKPNKFH WPEGGGRKLNDQAGGSDLTGGGGGVGVGGFPTGAHDADDELQMALRLSMEEYVKNLAPPP EEEPASENCINFMVKLSNRKIHKRFCVTKTLADVFYWLEYESVNRLDFGPSLLLRSSYNL YQIYPRRKFCKYQNGTIELQTGDKIEQVQDTPLVDLKFEKEETFMLS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1447800.fa Sequence name : PcyM_1447800 Sequence length : 407 VALUES OF COMPUTED PARAMETERS Coef20 : 3.191 CoefTot : -0.428 ChDiff : -4 ZoneTo : 8 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.441 1.171 0.211 0.556 MesoH : -0.844 -0.100 -0.523 0.144 MuHd_075 : 35.718 16.404 9.563 5.130 MuHd_095 : 26.863 12.810 6.670 5.126 MuHd_100 : 25.275 12.161 6.055 4.501 MuHd_105 : 17.747 8.659 4.075 3.105 Hmax_075 : 7.175 3.938 0.560 2.083 Hmax_095 : -1.487 1.225 -1.869 1.400 Hmax_100 : 1.400 -0.500 -2.272 1.910 Hmax_105 : -1.517 0.117 -2.252 1.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8643 0.1357 DFMC : 0.8006 0.1994
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 407 PcyM_1447800 MSKKYVYWEKQGNDRMCGLHCINAILQGPHYSEDVLATIGREIDEKEREFLKCSGGAGGSGMNDLMRKNSSNVLDDGFIN 80 ISVLIECLRRKNISVKNTFQEDLKKIISSDHQDIGYICNLEQHWFGIRKIYNTWYVLDSLKSGPLYIKDINLKYYFNDII 160 NKYHVFSVQNMNPYVSLPKADVNFLPKNPNQFYLCTSQISEISGVSSNGFIMEERVNSGSRGEKGSFFPSGGYDKPNKFH 240 WPEGGGRKLNDQAGGSDLTGGGGGVGVGGFPTGAHDADDELQMALRLSMEEYVKNLAPPPEEEPASENCINFMVKLSNRK 320 IHKRFCVTKTLADVFYWLEYESVNRLDFGPSLLLRSSYNLYQIYPRRKFCKYQNGTIELQTGDKIEQVQDTPLVDLKFEK 400 EETFMLS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1447800 3 ----MSK|KY 0.062 . PcyM_1447800 4 ---MSKK|YV 0.179 . PcyM_1447800 10 KYVYWEK|QG 0.066 . PcyM_1447800 15 EKQGNDR|MC 0.087 . PcyM_1447800 41 VLATIGR|EI 0.145 . PcyM_1447800 46 GREIDEK|ER 0.060 . PcyM_1447800 48 EIDEKER|EF 0.069 . PcyM_1447800 52 KEREFLK|CS 0.081 . PcyM_1447800 67 GMNDLMR|KN 0.096 . PcyM_1447800 68 MNDLMRK|NS 0.101 . PcyM_1447800 89 VLIECLR|RK 0.072 . PcyM_1447800 90 LIECLRR|KN 0.109 . PcyM_1447800 91 IECLRRK|NI 0.091 . PcyM_1447800 96 RKNISVK|NT 0.081 . PcyM_1447800 104 TFQEDLK|KI 0.064 . PcyM_1447800 105 FQEDLKK|II 0.097 . PcyM_1447800 128 QHWFGIR|KI 0.071 . PcyM_1447800 129 HWFGIRK|IY 0.076 . PcyM_1447800 141 YVLDSLK|SG 0.061 . PcyM_1447800 148 SGPLYIK|DI 0.061 . PcyM_1447800 153 IKDINLK|YY 0.062 . PcyM_1447800 162 FNDIINK|YH 0.056 . PcyM_1447800 179 PYVSLPK|AD 0.056 . PcyM_1447800 187 DVNFLPK|NP 0.060 . PcyM_1447800 215 GFIMEER|VN 0.091 . PcyM_1447800 221 RVNSGSR|GE 0.089 . PcyM_1447800 224 SGSRGEK|GS 0.117 . PcyM_1447800 235 PSGGYDK|PN 0.058 . PcyM_1447800 238 GYDKPNK|FH 0.071 . PcyM_1447800 247 WPEGGGR|KL 0.096 . PcyM_1447800 248 PEGGGRK|LN 0.089 . PcyM_1447800 286 ELQMALR|LS 0.073 . PcyM_1447800 294 SMEEYVK|NL 0.057 . PcyM_1447800 315 CINFMVK|LS 0.068 . PcyM_1447800 319 MVKLSNR|KI 0.099 . PcyM_1447800 320 VKLSNRK|IH 0.061 . PcyM_1447800 323 SNRKIHK|RF 0.064 . PcyM_1447800 324 NRKIHKR|FC 0.271 . PcyM_1447800 329 KRFCVTK|TL 0.088 . PcyM_1447800 345 EYESVNR|LD 0.062 . PcyM_1447800 355 GPSLLLR|SS 0.131 . PcyM_1447800 366 LYQIYPR|RK 0.076 . PcyM_1447800 367 YQIYPRR|KF 0.158 . PcyM_1447800 368 QIYPRRK|FC 0.096 . PcyM_1447800 371 PRRKFCK|YQ 0.089 . PcyM_1447800 384 ELQTGDK|IE 0.056 . PcyM_1447800 397 TPLVDLK|FE 0.067 . PcyM_1447800 400 VDLKFEK|EE 0.061 . ____________________________^_________________

  • Fasta :-

    >PcyM_1447800 ATGAGCAAGAAGTATGTGTACTGGGAGAAGCAGGGCAACGACCGGATGTGCGGTCTTCAC TGCATAAACGCCATCCTGCAGGGCCCGCACTACAGCGAAGACGTCCTGGCCACCATCGGC AGAGAAATCGACGAAAAGGAGAGGGAGTTCCTCAAGTGCAGCGGAGGAGCTGGAGGAAGT GGTATGAATGACCTGATGAGAAAAAATTCATCAAACGTTTTAGACGACGGATTTATAAAC ATCTCTGTCCTCATTGAATGTCTGAGGAGAAAAAATATTTCCGTAAAAAATACCTTCCAA GAAGATTTAAAAAAAATTATTTCAAGTGATCACCAAGACATAGGATACATATGTAACTTA GAGCAACATTGGTTTGGTATCAGAAAAATATACAACACGTGGTATGTACTAGACAGCTTG AAGAGTGGCCCCCTTTACATAAAGGATATTAATTTAAAGTATTATTTCAATGACATAATT AACAAGTACCATGTATTTTCTGTTCAGAATATGAATCCCTATGTGTCGTTACCCAAGGCA GATGTAAATTTTTTGCCGAAAAATCCAAATCAGTTTTATTTATGCACAAGTCAGATTTCT GAAATATCTGGAGTTTCTTCCAATGGGTTCATAATGGAGGAAAGGGTTAATTCAGGTAGC CGTGGGGAGAAGGGTTCTTTTTTTCCCTCCGGTGGGTATGACAAACCTAACAAGTTTCAT TGGCCTGAGGGTGGAGGGCGGAAGTTGAATGACCAGGCGGGGGGGAGCGATCTCACCGGG GGGGGTGGAGGTGTTGGTGTTGGCGGCTTCCCCACCGGTGCGCACGACGCGGACGATGAG TTGCAGATGGCTCTGCGGCTGTCCATGGAGGAGTACGTTAAGAATTTGGCCCCACCACCA GAAGAAGAACCCGCGAGCGAAAACTGCATCAACTTTATGGTCAAACTTTCAAATAGGAAG ATCCACAAGCGGTTCTGCGTCACGAAGACGTTGGCGGACGTCTTCTACTGGCTTGAGTAC GAGTCGGTGAACAGGCTGGATTTCGGCCCCTCTCTGCTCCTCAGGAGCAGCTACAACCTT TACCAAATATATCCCCGGAGGAAGTTTTGCAAGTACCAGAATGGGACCATAGAGCTGCAG ACGGGGGACAAGATCGAACAGGTGCAGGACACGCCCCTGGTGGACTTGAAGTTCGAGAAG GAGGAGACGTTCATGCTGTCTTAG
  • Download Fasta

  • Fasta :-

    MSKKYVYWEKQGNDRMCGLHCINAILQGPHYSEDVLATIGREIDEKEREFLKCSGGAGGS GMNDLMRKNSSNVLDDGFINISVLIECLRRKNISVKNTFQEDLKKIISSDHQDIGYICNL EQHWFGIRKIYNTWYVLDSLKSGPLYIKDINLKYYFNDIINKYHVFSVQNMNPYVSLPKA DVNFLPKNPNQFYLCTSQISEISGVSSNGFIMEERVNSGSRGEKGSFFPSGGYDKPNKFH WPEGGGRKLNDQAGGSDLTGGGGGVGVGGFPTGAHDADDELQMALRLSMEEYVKNLAPPP EEEPASENCINFMVKLSNRKIHKRFCVTKTLADVFYWLEYESVNRLDFGPSLLLRSSYNL YQIYPRRKFCKYQNGTIELQTGDKIEQVQDTPLVDLKFEKEETFMLS

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1447800288 SALRLSMEEY0.997unspPcyM_1447800288 SALRLSMEEY0.997unspPcyM_1447800288 SALRLSMEEY0.997unspPcyM_1447800292 YSMEEYVKNL0.99unspPcyM_144780094 SRKNISVKNT0.997unspPcyM_1447800218 SERVNSGSRG0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India