PcyM_1472800 | 26S protease regulatory subunit 8, putative

_IDPredictionOTHERSPmTPCS_Position
PcyM_1472800OTHER0.9997340.0000420.000224
No Results

  • Fasta :-

    >PcyM_1472800 MAAVDMQMRSGELPEEPKKDHKKDSNGVSKNEEEMQSGIKTYYEMKIEEYESIINKKLQN KKRLEAQRNELNTRVRELCDEIQYLLEAASYVGEIVKPMGKNKVLVKINPEGKYVVDIAH SINIAQCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEV KEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDG FESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGI DMMKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQDAEKNFTLR KLWK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1472800.fa Sequence name : PcyM_1472800 Sequence length : 424 VALUES OF COMPUTED PARAMETERS Coef20 : 3.031 CoefTot : 0.282 ChDiff : -3 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.335 0.788 -0.063 0.398 MesoH : -0.765 0.175 -0.411 0.158 MuHd_075 : 9.657 6.181 1.064 2.436 MuHd_095 : 15.318 1.927 3.045 0.977 MuHd_100 : 23.519 4.892 5.455 2.271 MuHd_105 : 31.347 9.037 7.516 3.893 Hmax_075 : -3.100 2.700 -3.414 1.510 Hmax_095 : 0.700 1.225 -2.383 1.348 Hmax_100 : 9.600 5.300 0.272 3.040 Hmax_105 : 4.783 1.867 -1.584 1.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9715 0.0285 DFMC : 0.9374 0.0626
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 424 PcyM_1472800 MAAVDMQMRSGELPEEPKKDHKKDSNGVSKNEEEMQSGIKTYYEMKIEEYESIINKKLQNKKRLEAQRNELNTRVRELCD 80 EIQYLLEAASYVGEIVKPMGKNKVLVKINPEGKYVVDIAHSINIAQCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVE 160 KVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 240 KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILD 320 EALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMMKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQED 400 FEMAVAKVMKQDAEKNFTLRKLWK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1472800 9 AVDMQMR|SG 0.100 . PcyM_1472800 18 ELPEEPK|KD 0.061 . PcyM_1472800 19 LPEEPKK|DH 0.097 . PcyM_1472800 22 EPKKDHK|KD 0.067 . PcyM_1472800 23 PKKDHKK|DS 0.172 . PcyM_1472800 30 DSNGVSK|NE 0.077 . PcyM_1472800 40 EMQSGIK|TY 0.057 . PcyM_1472800 46 KTYYEMK|IE 0.059 . PcyM_1472800 56 YESIINK|KL 0.064 . PcyM_1472800 57 ESIINKK|LQ 0.096 . PcyM_1472800 61 NKKLQNK|KR 0.061 . PcyM_1472800 62 KKLQNKK|RL 0.114 . PcyM_1472800 63 KLQNKKR|LE 0.171 . PcyM_1472800 68 KRLEAQR|NE 0.074 . PcyM_1472800 74 RNELNTR|VR 0.073 . PcyM_1472800 76 ELNTRVR|EL 0.116 . PcyM_1472800 97 YVGEIVK|PM 0.063 . PcyM_1472800 101 IVKPMGK|NK 0.053 . PcyM_1472800 103 KPMGKNK|VL 0.076 . PcyM_1472800 107 KNKVLVK|IN 0.064 . PcyM_1472800 113 KINPEGK|YV 0.103 . PcyM_1472800 132 QCTPNTR|VA 0.068 . PcyM_1472800 141 LYNDSYK|LH 0.058 . PcyM_1472800 144 DSYKLHK|IL 0.062 . PcyM_1472800 149 HKILPSK|VD 0.057 . PcyM_1472800 158 PLVSLMK|VE 0.054 . PcyM_1472800 161 SLMKVEK|VP 0.064 . PcyM_1472800 178 GLDQQVK|EV 0.083 . PcyM_1472800 181 QQVKEVK|EV 0.072 . PcyM_1472800 189 VIELPVK|HP 0.060 . PcyM_1472800 203 LGISQPK|GV 0.082 . PcyM_1472800 215 GPPGTGK|TL 0.059 . PcyM_1472800 220 GKTLLAR|AV 0.134 . PcyM_1472800 232 TDCTFIR|VS 0.131 . PcyM_1472800 241 GSELVQK|YI 0.105 . PcyM_1472800 248 YIGEGSR|MV 0.115 . PcyM_1472800 251 EGSRMVR|EL 0.260 . PcyM_1472800 258 ELFVMAR|EH 0.090 . PcyM_1472800 277 DSIGSQR|IE 0.114 . PcyM_1472800 289 GDSEVQR|TM 0.152 . PcyM_1472800 308 ESTQNIK|VI 0.055 . PcyM_1472800 315 VIMCTNR|ID 0.079 . PcyM_1472800 325 LDEALLR|PG 0.072 . PcyM_1472800 328 ALLRPGR|ID 0.204 . PcyM_1472800 331 RPGRIDR|KI 0.277 . PcyM_1472800 332 PGRIDRK|IE 0.075 . PcyM_1472800 343 NPNVEAR|ME 0.139 . PcyM_1472800 348 ARMEILK|IH 0.070 . PcyM_1472800 352 ILKIHSR|KM 0.075 . PcyM_1472800 353 LKIHSRK|MN 0.101 . PcyM_1472800 358 RKMNLMR|GI 0.139 . PcyM_1472800 364 RGIDMMK|IA 0.071 . PcyM_1472800 378 CSGAEVK|AV 0.103 . PcyM_1472800 390 AGMFALR|ER 0.080 . PcyM_1472800 392 MFALRER|RV 0.129 . PcyM_1472800 393 FALRERR|VH 0.353 . PcyM_1472800 407 FEMAVAK|VM 0.065 . PcyM_1472800 410 AVAKVMK|QD 0.074 . PcyM_1472800 415 MKQDAEK|NF 0.058 . PcyM_1472800 420 EKNFTLR|KL 0.106 . PcyM_1472800 421 KNFTLRK|LW 0.077 . PcyM_1472800 424 TLRKLWK|-- 0.080 . ____________________________^_________________

  • Fasta :-

    >PcyM_1472800 ATGGCGGCCGTGGATATGCAAATGAGGTCGGGCGAACTGCCGGAGGAGCCCAAGAAGGAT CATAAGAAGGACTCCAACGGAGTCAGCAAAAATGAGGAGGAAATGCAATCGGGCATCAAA ACATATTACGAAATGAAAATTGAAGAATACGAATCGATAATAAATAAAAAATTACAAAAC AAAAAGAGGTTGGAAGCACAGAGAAATGAATTAAATACAAGAGTGAGGGAATTGTGTGAT GAAATTCAATACCTCTTAGAAGCTGCGTCTTATGTAGGAGAAATAGTGAAGCCCATGGGG AAAAATAAAGTGCTAGTTAAAATAAACCCAGAAGGTAAGTACGTAGTGGACATAGCACAT AGCATAAATATTGCACAATGTACACCCAACACGAGAGTAGCATTATATAACGACTCATAT AAACTGCATAAGATCCTCCCGAGTAAAGTAGATCCCCTTGTGTCTCTTATGAAAGTGGAG AAGGTACCAGACTCGACGTATGAAATGGTGGGAGGATTAGATCAACAAGTAAAGGAAGTC AAAGAAGTAATCGAGTTACCAGTGAAGCATCCAGAAATTTTCGAATCTTTGGGAATTTCA CAACCTAAAGGGGTTCTACTATATGGTCCACCAGGGACAGGAAAAACGTTATTAGCAAGA GCAGTAGCACATCATACAGACTGTACTTTTATTCGAGTCTCTGGATCTGAACTAGTCCAA AAATACATTGGTGAAGGATCAAGAATGGTAAGGGAATTATTTGTCATGGCAAGGGAACAT GCACCATCAATCATTTTTATGGATGAAATTGATTCTATTGGAAGCCAGAGGATAGAAGGA GAACATGGAGACTCGGAAGTACAGAGAACTATGATGGAATTACTTAATCAGCTAGACGGA TTTGAATCTACACAAAATATCAAAGTCATCATGTGTACGAACAGAATTGATATCCTAGAT GAGGCTTTACTACGACCAGGTAGGATTGACAGAAAAATTGAATTCCCCAACCCTAATGTT GAAGCTCGAATGGAAATTTTAAAAATCCATAGTAGGAAGATGAACCTGATGAGAGGAATC GATATGATGAAAATTGCTACTGATATGAATAACTGTTCTGGGGCGGAGGTGAAGGCTGTT TGTACGGAGGCTGGTATGTTTGCTCTACGCGAGAGGCGTGTCCACGTCACGCAGGAGGAC TTCGAGATGGCCGTCGCCAAGGTTATGAAGCAGGACGCAGAGAAGAACTTCACCCTGCGC AAGTTGTGGAAGTAG
  • Download Fasta

  • Fasta :-

    MAAVDMQMRSGELPEEPKKDHKKDSNGVSKNEEEMQSGIKTYYEMKIEEYESIINKKLQN KKRLEAQRNELNTRVRELCDEIQYLLEAASYVGEIVKPMGKNKVLVKINPEGKYVVDIAH SINIAQCTPNTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEV KEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDSEVQRTMMELLNQLDG FESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGI DMMKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKQDAEKNFTLR KLWK

  • title: ATP binding site
  • coordinates: P210,P211,G212,T213,G214,K215,T216,L217,D268,N314
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1472800165 SKVPDSTYEM0.996unspPcyM_1472800234 SFIRVSGSEL0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India