SPAC1006.01 | vacuolar serine protease Psp3 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC1006.01SP0.0045020.9946450.000852CS pos: 20-21. SSA-FN. Pr: 0.9307
No Results

  • Fasta :-

    >SPAC1006.01 MRVSWISGLLLVAHLAPSSAFNPLRFFLDDTFSSGATEEHFMGPSDDGFALQQPTNYDPS MPFPLDESASAAVDAVSNNYIVMFKPSVDKSKLEQHHRWIEHLHEKRSLDFKDVSTFLMK HTFEIGDAFLGYAGRFSPWLVAELQKHPDIALVEPDRVMHVMTEQTFAPWGLARVSHRKK LGFFTMTRYQYNETAGEGVTAYVIDTGINIEHQDFQGRATWGATIPTGEGEVDDHGHGTH VAGTIAGKTFGVSKNAKLVAVKVMRADGTGTVSDIIKGIEFAFKQSKKDKESIASVVNMS IGGDASTALDLAVNAAIAGGLFFAVAAGNDAEDACGTSPARVSNAMTVGASTWNDQIASF SNIGSCVDIFAPGSLILSDWIGSNRASMILSGTSMASPHVAGLAAYFISLDPSLANHPVE LKKYMLKFALKDLLNGIPEDTPNVLAFNNYE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/359 Sequence name : 359 Sequence length : 451 VALUES OF COMPUTED PARAMETERS Coef20 : 4.601 CoefTot : 0.744 ChDiff : -16 ZoneTo : 28 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.747 2.024 0.277 0.748 MesoH : 0.472 0.641 -0.104 0.347 MuHd_075 : 14.366 20.058 5.017 4.946 MuHd_095 : 24.195 19.511 7.492 6.208 MuHd_100 : 20.782 13.722 6.284 4.908 MuHd_105 : 19.606 14.873 4.622 4.952 Hmax_075 : 18.400 22.750 3.936 7.140 Hmax_095 : 15.400 16.100 2.401 5.670 Hmax_100 : 16.000 16.200 2.379 5.860 Hmax_105 : 14.800 21.700 1.145 5.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6395 0.3605 DFMC : 0.6606 0.3394
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 451 SPAC1006.01 MRVSWISGLLLVAHLAPSSAFNPLRFFLDDTFSSGATEEHFMGPSDDGFALQQPTNYDPSMPFPLDESASAAVDAVSNNY 80 IVMFKPSVDKSKLEQHHRWIEHLHEKRSLDFKDVSTFLMKHTFEIGDAFLGYAGRFSPWLVAELQKHPDIALVEPDRVMH 160 VMTEQTFAPWGLARVSHRKKLGFFTMTRYQYNETAGEGVTAYVIDTGINIEHQDFQGRATWGATIPTGEGEVDDHGHGTH 240 VAGTIAGKTFGVSKNAKLVAVKVMRADGTGTVSDIIKGIEFAFKQSKKDKESIASVVNMSIGGDASTALDLAVNAAIAGG 320 LFFAVAAGNDAEDACGTSPARVSNAMTVGASTWNDQIASFSNIGSCVDIFAPGSLILSDWIGSNRASMILSGTSMASPHV 400 AGLAAYFISLDPSLANHPVELKKYMLKFALKDLLNGIPEDTPNVLAFNNYE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC1006.01 2 -----MR|VS 0.089 . SPAC1006.01 25 SAFNPLR|FF 0.117 . SPAC1006.01 85 NYIVMFK|PS 0.059 . SPAC1006.01 90 FKPSVDK|SK 0.070 . SPAC1006.01 92 PSVDKSK|LE 0.069 . SPAC1006.01 98 KLEQHHR|WI 0.104 . SPAC1006.01 106 IEHLHEK|RS 0.062 . SPAC1006.01 107 EHLHEKR|SL 0.263 . SPAC1006.01 112 KRSLDFK|DV 0.195 . SPAC1006.01 120 VSTFLMK|HT 0.080 . SPAC1006.01 135 FLGYAGR|FS 0.086 . SPAC1006.01 146 LVAELQK|HP 0.068 . SPAC1006.01 157 ALVEPDR|VM 0.079 . SPAC1006.01 174 APWGLAR|VS 0.099 . SPAC1006.01 178 LARVSHR|KK 0.108 . SPAC1006.01 179 ARVSHRK|KL 0.108 . SPAC1006.01 180 RVSHRKK|LG 0.097 . SPAC1006.01 188 GFFTMTR|YQ 0.082 . SPAC1006.01 218 HQDFQGR|AT 0.098 . SPAC1006.01 248 AGTIAGK|TF 0.065 . SPAC1006.01 254 KTFGVSK|NA 0.062 . SPAC1006.01 257 GVSKNAK|LV 0.092 . SPAC1006.01 262 AKLVAVK|VM 0.060 . SPAC1006.01 265 VAVKVMR|AD 0.132 . SPAC1006.01 277 TVSDIIK|GI 0.103 . SPAC1006.01 284 GIEFAFK|QS 0.065 . SPAC1006.01 287 FAFKQSK|KD 0.062 . SPAC1006.01 288 AFKQSKK|DK 0.142 . SPAC1006.01 290 KQSKKDK|ES 0.097 . SPAC1006.01 341 CGTSPAR|VS 0.075 . SPAC1006.01 385 DWIGSNR|AS 0.083 . SPAC1006.01 422 NHPVELK|KY 0.054 . SPAC1006.01 423 HPVELKK|YM 0.086 . SPAC1006.01 427 LKKYMLK|FA 0.072 . SPAC1006.01 431 MLKFALK|DL 0.074 . ____________________________^_________________

  • Fasta :-

    >SPAC1006.01 GCTCACAACAACTTAACTTCTTCACAACACACTTGCTTTTTTTGAGTAATTTCAACTGAT TTGCAATTGACATTTCCATTGTTTTGTTTTTCTTTGTTGCATTTTTTCTTTTGCAAAGCT TTATATTTGTATCCATTACTTGAAATCTTGTTGGTTTCTAAATTCCTTTCTTTTTTTCCG AATTCATTTTTTCAAAGACACTACGCGGTTGCTTGAAGCTGAAAGAGTTTGCTAATTGCT TATTTCAATCTGCTTTTTGAATTACTCTTGATTAAAGTACAAGTCTTCACTTTTTTTTTC GTGTGAGCGTGTGTGTAGAATTCTTCTTGTTCTCAATTTTTGTATCATGAGAGTTTCTTG GATTAGCGGTCTCTTATTAGTGGCGCACCTGGCTCCTTCCAGCGCCTTCAACCCTTTAAG GTTTTTCCTGGATGACACCTTTTCAAGCGGTGCTACTGAGGAACATTTTATGGGCCCCTC TGATGATGGTTTTGCGCTTCAGCAGCCCACCAATTATGATCCTTCTATGCCATTTCCTTT AGATGAATCGGCATCAGCCGCTGTGGATGCTGTGTCTAATAATTACATTGTCATGTTTAA ACCTTCTGTTGACAAATCGAAGCTTGAGCAACATCATCGTTGGATTGAGCATTTACACGA GAAACGATCCTTAGATTTTAAGGATGTATCTACCTTTTTAATGAAGCATACCTTTGAAAT TGGAGACGCTTTTCTTGGTTATGCTGGTCGTTTTTCTCCTTGGTTGGTGGCCGAGTTGCA AAAGCACCCCGACATTGCCCTTGTTGAACCTGACCGTGTTATGCATGTTATGACTGAACA AACTTTTGCACCTTGGGGTTTGGCTCGTGTATCTCATCGTAAAAAACTCGGTTTTTTTAC CATGACTCGTTACCAATACAATGAGACTGCCGGTGAAGGTGTTACTGCATACGTTATCGA TACTGGTATCAACATTGAGCACCAAGATTTTCAAGGCCGTGCCACTTGGGGTGCCACCAT TCCCACTGGAGAAGGCGAAGTGGATGATCATGGTCATGGCACTCACGTTGCTGGTACCAT TGCAGGAAAAACCTTTGGTGTATCTAAGAATGCCAAACTTGTTGCCGTTAAGGTAATGCG AGCCGATGGTACTGGTACCGTATCAGATATTATTAAAGGTATCGAGTTTGCCTTTAAGCA ATCTAAGAAAGACAAGGAATCAATTGCAAGTGTCGTCAATATGTCCATCGGCGGTGATGC AAGTACTGCTCTTGATCTGGCTGTGAATGCCGCTATTGCCGGTGGACTTTTCTTTGCCGT TGCTGCTGGTAATGATGCAGAGGATGCTTGCGGTACCTCTCCAGCCAGAGTTTCCAATGC AATGACTGTTGGTGCTTCTACTTGGAACGATCAAATTGCTTCTTTTAGCAATATTGGATC TTGCGTTGATATCTTTGCTCCTGGTTCTTTAATTTTGTCTGATTGGATTGGATCTAACAG GGCTTCTATGATCCTTTCTGGTACTTCTATGGCTTCTCCTCATGTCGCCGGTTTGGCTGC TTATTTTATCTCTCTCGATCCTTCGCTGGCTAATCATCCTGTGGAGTTGAAGAAGTATAT GCTGAAGTTTGCCCTAAAAGACTTATTAAATGGCATTCCTGAGGACACACCTAATGTCCT TGCCTTCAACAATTATGAGTAAACGCTAGTTATGTGTATGTAAATGTTAGCTTGATGACC TTGATTGTTTATTTTTTGATGCTCCGATACGAATGATCAATTAACCAAGTTGTTGAATAT CTACTGTCATCAGACGAACAAGCTCAGAGTAATGACATTTGTTATGTTTAGCAATGAAAT CATTTAAAACGATACCAA
  • Download Fasta

  • Fasta :-

    MRVSWISGLLLVAHLAPSSAFNPLRFFLDDTFSSGATEEHFMGPSDDGFALQQPTNYDPS MPFPLDESASAAVDAVSNNYIVMFKPSVDKSKLEQHHRWIEHLHEKRSLDFKDVSTFLMK HTFEIGDAFLGYAGRFSPWLVAELQKHPDIALVEPDRVMHVMTEQTFAPWGLARVSHRKK LGFFTMTRYQYNETAGEGVTAYVIDTGINIEHQDFQGRATWGATIPTGEGEVDDHGHGTH VAGTIAGKTFGVSKNAKLVAVKVMRADGTGTVSDIIKGIEFAFKQSKKDKESIASVVNMS IGGDASTALDLAVNAAIAGGLFFAVAAGNDAEDACGTSPARVSNAMTVGASTWNDQIASF SNIGSCVDIFAPGSLILSDWIGSNRASMILSGTSMASPHVAGLAAYFISLDPSLANHPVE LKKYMLKFALKDLLNGIPEDTPNVLAFNNYE

  • title: active site
  • coordinates: D205,H237,I301,G302,N329,S391,S394
No Results
No Results
IDSitePeptideScoreMethod
SPAC1006.01286 SAFKQSKKDK0.996unsp

SPAC1006.01      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India