SPAC1296.03c | serine carboxypeptidase Sxa2

_IDPredictionOTHERSPmTPCS_Position
SPAC1296.03cSP0.0161710.9829740.000855CS pos: 22-23. IHA-LP. Pr: 0.9717
No Results

  • Fasta :-

    >SPAC1296.03c MLSLFLKSLFAIIIIELTIIHALPTYTVHWKCSIQQANTSSASSNQTVQPRQHAAPSSDR IKSLPEFKGSLPELYSGYLEANSDKSLFYTYAPAVVDSETFIVWLQGGPGCAGTLGFFSE NGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYSQGQAAYTTTIEEASSDFVNALK SFYQKFPHLMKKKLYLVGESYGSIWSANFAEALLSEPSLNINFMGVGIVSGLTADYETQE QITASIWVEHISKLGYYFNNTSSTISEEFKKRNKECQYDSVLNRLTFPTEQYPIWRPEYN FSTSTSLRKREALDGEDIGNVFNSISGCDLYSLSNFLLYLENSCVITYDVSLDCSFNEYN DPLITYLNREDVRSSLHATKASTALTSGEGVFADGCNFDLYKKIVSNNVESVLVEIIPRL TEKYKVSFLAGALDLQILWTGTLLALQNTTWNGWQGFTQSPGSLETTNGFTLDERNLAFT LSNSVGHMAPSKDPQMVREWLENTLLY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/60 Sequence name : 60 Sequence length : 507 VALUES OF COMPUTED PARAMETERS Coef20 : 4.881 CoefTot : -0.414 ChDiff : -20 ZoneTo : 58 KR : 3 DE : 1 CleavSite : 53 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.535 2.394 0.223 0.785 MesoH : 0.103 0.410 -0.285 0.286 MuHd_075 : 29.394 22.346 9.664 7.025 MuHd_095 : 19.079 14.877 6.858 4.875 MuHd_100 : 21.585 15.738 6.952 5.247 MuHd_105 : 19.949 17.130 7.121 4.856 Hmax_075 : 22.600 15.750 4.572 9.100 Hmax_095 : 4.462 26.075 0.472 8.400 Hmax_100 : 9.700 7.300 1.483 6.320 Hmax_105 : 2.625 22.662 1.911 7.140 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9765 0.0235 DFMC : 0.9808 0.0192
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 507 SPAC1296.03c MLSLFLKSLFAIIIIELTIIHALPTYTVHWKCSIQQANTSSASSNQTVQPRQHAAPSSDRIKSLPEFKGSLPELYSGYLE 80 ANSDKSLFYTYAPAVVDSETFIVWLQGGPGCAGTLGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYSQG 160 QAAYTTTIEEASSDFVNALKSFYQKFPHLMKKKLYLVGESYGSIWSANFAEALLSEPSLNINFMGVGIVSGLTADYETQE 240 QITASIWVEHISKLGYYFNNTSSTISEEFKKRNKECQYDSVLNRLTFPTEQYPIWRPEYNFSTSTSLRKREALDGEDIGN 320 VFNSISGCDLYSLSNFLLYLENSCVITYDVSLDCSFNEYNDPLITYLNREDVRSSLHATKASTALTSGEGVFADGCNFDL 400 YKKIVSNNVESVLVEIIPRLTEKYKVSFLAGALDLQILWTGTLLALQNTTWNGWQGFTQSPGSLETTNGFTLDERNLAFT 480 LSNSVGHMAPSKDPQMVREWLENTLLY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ........................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC1296.03c 7 MLSLFLK|SL 0.111 . SPAC1296.03c 31 TYTVHWK|CS 0.079 . SPAC1296.03c 51 NQTVQPR|QH 0.080 . SPAC1296.03c 60 AAPSSDR|IK 0.077 . SPAC1296.03c 62 PSSDRIK|SL 0.092 . SPAC1296.03c 68 KSLPEFK|GS 0.066 . SPAC1296.03c 85 LEANSDK|SL 0.080 . SPAC1296.03c 180 DFVNALK|SF 0.083 . SPAC1296.03c 185 LKSFYQK|FP 0.070 . SPAC1296.03c 191 KFPHLMK|KK 0.055 . SPAC1296.03c 192 FPHLMKK|KL 0.121 . SPAC1296.03c 193 PHLMKKK|LY 0.101 . SPAC1296.03c 253 WVEHISK|LG 0.058 . SPAC1296.03c 270 TISEEFK|KR 0.066 . SPAC1296.03c 271 ISEEFKK|RN 0.093 . SPAC1296.03c 272 SEEFKKR|NK 0.274 . SPAC1296.03c 274 EFKKRNK|EC 0.053 . SPAC1296.03c 284 YDSVLNR|LT 0.119 . SPAC1296.03c 296 EQYPIWR|PE 0.076 . SPAC1296.03c 308 STSTSLR|KR 0.100 . SPAC1296.03c 309 TSTSLRK|RE 0.067 . SPAC1296.03c 310 STSLRKR|EA 0.424 . SPAC1296.03c 369 LITYLNR|ED 0.067 . SPAC1296.03c 373 LNREDVR|SS 0.127 . SPAC1296.03c 380 SSLHATK|AS 0.068 . SPAC1296.03c 402 CNFDLYK|KI 0.059 . SPAC1296.03c 403 NFDLYKK|IV 0.105 . SPAC1296.03c 419 LVEIIPR|LT 0.092 . SPAC1296.03c 423 IPRLTEK|YK 0.070 . SPAC1296.03c 425 RLTEKYK|VS 0.064 . SPAC1296.03c 475 GFTLDER|NL 0.070 . SPAC1296.03c 492 GHMAPSK|DP 0.076 . SPAC1296.03c 498 KDPQMVR|EW 0.074 . ____________________________^_________________

  • Fasta :-

    >SPAC1296.03c TTTAATTTAGCGCTAACGCTTTTCTCATAGGCTCAAAATCATTGTCTCTCTTTTCAATGC TGTCTTTATTTTTGAAATCTCTTTTTGCTATTATAATAATTGAATTGACTATCATTCACG CTTTACCAACTTACACTGTACATTGGAAATGCAGTATACAACAAGCCAACACGAGTTCTG CTTCCTCGAATCAGACTGTTCAACCTAGACAACACGCTGCTCCTTCTTCGGATCGAATTA AATCACTTCCTGAATTTAAGGGATCATTACCGGAATTATATTCTGGATACTTGGAAGCGA ATTCCGATAAATCACTTTTTTATACATATGCCCCTGCTGTTGTTGATTCGGAAACTTTCA TAGTATGGCTTCAAGGAGGACCTGGATGCGCTGGAACATTAGGCTTTTTCAGTGAAAATG GACCCATTGAAATATCCCAAAGTAGCCCCTCACCATCCCTTAATCCTGAATCTTGGACAA ACTTCGCCAACATGTTATGGTTAGATCAGCCATTTGGTACGGGGTACTCCCAAGGACAGG CGGCATATACAACTACGATTGAAGAAGCTTCTTCAGATTTTGTAAATGCCCTGAAATCAT TTTACCAAAAGTTTCCCCACTTAATGAAGAAAAAGCTCTACCTTGTCGGCGAAAGCTACG GTAGCATATGGAGCGCCAATTTTGCAGAGGCATTACTTTCTGAACCATCTTTGAATATAA ATTTTATGGGCGTGGGAATCGTCAGTGGACTTACGGCGGACTACGAAACTCAAGAACAAA TTACTGCTTCTATTTGGGTGGAACATATCAGCAAACTTGGATACTATTTTAATAATACTT CTTCCACAATATCTGAAGAGTTTAAAAAGCGCAATAAAGAATGTCAATATGATTCAGTTT TGAACAGATTGACGTTTCCTACTGAACAATACCCAATATGGAGACCAGAGTACAACTTTA GCACATCTACTTCTCTAAGGAAGCGGGAAGCTCTCGATGGTGAAGACATTGGGAATGTAT TTAATTCAATTTCTGGATGTGACTTGTATTCCCTTTCTAACTTTTTACTTTATCTAGAGA ACAGCTGTGTCATAACTTATGATGTTAGCCTTGATTGTAGTTTCAATGAGTATAATGATC CCTTAATCACATACCTGAACAGAGAAGATGTTCGCTCTTCTTTACATGCTACGAAAGCTT CAACTGCGTTGACAAGCGGCGAGGGTGTCTTCGCAGACGGATGCAATTTTGACTTATACA AAAAGATTGTGAGTAACAACGTAGAATCAGTTCTCGTTGAAATAATTCCACGCTTAACAG AAAAATACAAAGTGTCTTTCTTAGCTGGGGCATTGGATCTTCAAATTCTTTGGACCGGAA CTCTTTTGGCATTGCAAAATACAACATGGAATGGATGGCAGGGATTCACTCAATCTCCTG GAAGTTTAGAGACAACTAATGGATTTACTTTGGATGAACGTAACTTAGCCTTTACATTGT CCAACTCGGTTGGGCACATGGCTCCATCTAAAGACCCTCAAATGGTTAGAGAATGGCTTG AAAATACGTTGCTTTATTAAAAGTTTAATATCGGAAAATTTAAAATACAAGTTTATTGAC TTACCACTGATGTGGTATATCAATAAATAACTATCGTTTATGAAACTCGGAACGATAATT AGATCATATTTCCGCATGACTACAAGAAAAAAAGAATGGTGCTTGAATTAACAACTAAGA TATGGTTGAATAGATAGAATTATTTATAAGATATACGTTTACGAATAATCGAATCGTTCC CAAAATAAGAAATAGATCAGCATACAGTTTTCATTGATTTTTCAAAGTTCAAAT
  • Download Fasta

  • Fasta :-

    MLSLFLKSLFAIIIIELTIIHALPTYTVHWKCSIQQANTSSASSNQTVQPRQHAAPSSDR IKSLPEFKGSLPELYSGYLEANSDKSLFYTYAPAVVDSETFIVWLQGGPGCAGTLGFFSE NGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYSQGQAAYTTTIEEASSDFVNALK SFYQKFPHLMKKKLYLVGESYGSIWSANFAEALLSEPSLNINFMGVGIVSGLTADYETQE QITASIWVEHISKLGYYFNNTSSTISEEFKKRNKECQYDSVLNRLTFPTEQYPIWRPEYN FSTSTSLRKREALDGEDIGNVFNSISGCDLYSLSNFLLYLENSCVITYDVSLDCSFNEYN DPLITYLNREDVRSSLHATKASTALTSGEGVFADGCNFDLYKKIVSNNVESVLVEIIPRL TEKYKVSFLAGALDLQILWTGTLLALQNTTWNGWQGFTQSPGSLETTNGFTLDERNLAFT LSNSVGHMAPSKDPQMVREWLENTLLY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC1296.03c266 SSSTISEEFK0.993unspSPAC1296.03c266 SSSTISEEFK0.993unspSPAC1296.03c266 SSSTISEEFK0.993unspSPAC1296.03c375 SDVRSSLHAT0.995unspSPAC1296.03c63 SDRIKSLPEF0.991unspSPAC1296.03c132 SQSSPSPSLN0.993unsp

SPAC1296.03c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India