SPAC12G12.11c | DUF544 family protein

_IDPredictionOTHERSPmTPCS_Position
SPAC12G12.11cOTHER0.9999930.0000010.000006
No Results

  • Fasta :-

    >SPAC12G12.11c MDNVQEHDPDTQEHNNETQNHKQEDHSNSYQTRTIPFIEPLSREYQKRIILCQTVNGPCP IIALSNALILKSNVDRPFELPKKRYITPDELTEYLVEFAKAYGLCKNQQSLQDKLTSMHF GQQLNPCLYDIEKFEYGHEIFCTFGVRLVHGWILSDDMGLSDEDLSYLRKLEYYEKVADT FAERRSLLEMQEPLTEQQQDFLNNSTCVDKVMENRYTMQFLTNAGLKKILELVGPGEIVV VFRSSHFSTMYSNPDSFAQFTLVTDSGYARTGEDVVWETFDSQTVETGNGELCAANFIPA VYVLNQRKEEKKKRAKDDEQYAKRLAKEEEERGKKETPKKASNTPRRNKSNTQKSRKQSE NCLIS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/920 Sequence name : 920 Sequence length : 365 VALUES OF COMPUTED PARAMETERS Coef20 : 2.082 CoefTot : 0.000 ChDiff : -10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.159 1.441 0.293 0.533 MesoH : -0.513 0.136 -0.377 0.199 MuHd_075 : 19.406 10.468 5.741 2.878 MuHd_095 : 26.488 12.039 6.537 2.562 MuHd_100 : 31.984 14.161 7.444 3.380 MuHd_105 : 28.334 13.472 6.279 3.504 Hmax_075 : -13.650 -9.683 -7.139 -0.957 Hmax_095 : -10.600 -8.600 -7.319 -1.360 Hmax_100 : -8.600 -5.500 -5.414 -0.440 Hmax_105 : -5.800 -5.200 -5.990 0.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9957 0.0043 DFMC : 0.9932 0.0068
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 365 SPAC12G12.11c MDNVQEHDPDTQEHNNETQNHKQEDHSNSYQTRTIPFIEPLSREYQKRIILCQTVNGPCPIIALSNALILKSNVDRPFEL 80 PKKRYITPDELTEYLVEFAKAYGLCKNQQSLQDKLTSMHFGQQLNPCLYDIEKFEYGHEIFCTFGVRLVHGWILSDDMGL 160 SDEDLSYLRKLEYYEKVADTFAERRSLLEMQEPLTEQQQDFLNNSTCVDKVMENRYTMQFLTNAGLKKILELVGPGEIVV 240 VFRSSHFSTMYSNPDSFAQFTLVTDSGYARTGEDVVWETFDSQTVETGNGELCAANFIPAVYVLNQRKEEKKKRAKDDEQ 320 YAKRLAKEEEERGKKETPKKASNTPRRNKSNTQKSRKQSENCLIS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC12G12.11c 22 NETQNHK|QE 0.062 . SPAC12G12.11c 33 SNSYQTR|TI 0.160 . SPAC12G12.11c 43 FIEPLSR|EY 0.072 . SPAC12G12.11c 47 LSREYQK|RI 0.069 . SPAC12G12.11c 48 SREYQKR|II 0.296 . SPAC12G12.11c 71 SNALILK|SN 0.080 . SPAC12G12.11c 76 LKSNVDR|PF 0.095 . SPAC12G12.11c 82 RPFELPK|KR 0.062 . SPAC12G12.11c 83 PFELPKK|RY 0.070 . SPAC12G12.11c 84 FELPKKR|YI 0.275 . SPAC12G12.11c 100 YLVEFAK|AY 0.071 . SPAC12G12.11c 106 KAYGLCK|NQ 0.058 . SPAC12G12.11c 114 QQSLQDK|LT 0.098 . SPAC12G12.11c 133 CLYDIEK|FE 0.063 . SPAC12G12.11c 147 FCTFGVR|LV 0.091 . SPAC12G12.11c 169 EDLSYLR|KL 0.075 . SPAC12G12.11c 170 DLSYLRK|LE 0.071 . SPAC12G12.11c 176 KLEYYEK|VA 0.060 . SPAC12G12.11c 184 ADTFAER|RS 0.065 . SPAC12G12.11c 185 DTFAERR|SL 0.154 . SPAC12G12.11c 210 NSTCVDK|VM 0.061 . SPAC12G12.11c 215 DKVMENR|YT 0.114 . SPAC12G12.11c 227 LTNAGLK|KI 0.059 . SPAC12G12.11c 228 TNAGLKK|IL 0.155 . SPAC12G12.11c 243 EIVVVFR|SS 0.172 . SPAC12G12.11c 270 TDSGYAR|TG 0.130 . SPAC12G12.11c 307 VYVLNQR|KE 0.074 . SPAC12G12.11c 308 YVLNQRK|EE 0.067 . SPAC12G12.11c 311 NQRKEEK|KK 0.069 . SPAC12G12.11c 312 QRKEEKK|KR 0.095 . SPAC12G12.11c 313 RKEEKKK|RA 0.139 . SPAC12G12.11c 314 KEEKKKR|AK 0.361 . SPAC12G12.11c 316 EKKKRAK|DD 0.093 . SPAC12G12.11c 323 DDEQYAK|RL 0.067 . SPAC12G12.11c 324 DEQYAKR|LA 0.199 . SPAC12G12.11c 327 YAKRLAK|EE 0.139 . SPAC12G12.11c 332 AKEEEER|GK 0.078 . SPAC12G12.11c 334 EEEERGK|KE 0.060 . SPAC12G12.11c 335 EEERGKK|ET 0.190 . SPAC12G12.11c 339 GKKETPK|KA 0.080 . SPAC12G12.11c 340 KKETPKK|AS 0.119 . SPAC12G12.11c 346 KASNTPR|RN 0.107 . SPAC12G12.11c 347 ASNTPRR|NK 0.212 . SPAC12G12.11c 349 NTPRRNK|SN 0.189 . SPAC12G12.11c 354 NKSNTQK|SR 0.122 . SPAC12G12.11c 356 SNTQKSR|KQ 0.094 . SPAC12G12.11c 357 NTQKSRK|QS 0.108 . ____________________________^_________________

  • Fasta :-

    >SPAC12G12.11c TTTCATTTAAACTATAAATCCTCCTGTCATAAAACTAAATTTATTTTGAGTAAACACCTT TTATCATTAGCACTGACACTGGTTTTACTGTGATATGGTGGTGTAAGCTATATCCTTACC CAACTTACGATCAACGTCTCTAAATTAACTCATAAGGTTAATTTAAATGACACATTTAGG AATCCTTGAATATAAATTTGAAATTTTCAAAAAGGAATTCTTTAAGAAACCTAAGTTCTG TTAATTACCAAGCCATGGATAATGTTCAGGAACACGATCCTGATACTCAAGAGCATAATA ATGAAACTCAGAACCATAAGCAAGAGGACCATTCTAATTCCTACCAGACAAGAACTATTC CTTTCATAGAACCCCTTTCAAGGGAATACCAGAAACGAATTATTCTATGTCAAACAGTTA ATGGCCCGTGTCCTATAATTGCTTTGTCCAATGCATTAATATTAAAGTCAAACGTAGATC GACCATTTGAATTGCCGAAGAAAAGATACATCACACCCGATGAACTGACAGAATACTTGG TGGAGTTTGCTAAAGCATACGGCTTATGCAAAAATCAGCAAAGTCTTCAGGATAAACTGA CATCTATGCATTTCGGTCAGCAATTGAATCCTTGTCTCTATGATATTGAAAAGTTTGAGT ATGGGCATGAAATCTTTTGTACATTTGGAGTTCGATTAGTTCATGGTTGGATTCTTTCAG ATGATATGGGTTTGAGCGACGAAGATTTAAGCTACCTTCGAAAGCTTGAATATTATGAAA AAGTTGCAGATACATTTGCCGAACGTCGTTCTCTATTAGAGATGCAGGAGCCACTAACTG AACAGCAGCAAGATTTTTTAAATAATTCTACATGTGTTGACAAAGTTATGGAAAATCGTT ATACAATGCAATTTTTGACGAATGCTGGTCTTAAAAAGATTCTTGAGCTTGTAGGTCCAG GGGAAATAGTCGTGGTTTTTCGTTCCAGTCATTTCAGTACCATGTATTCAAATCCAGATT CATTCGCACAATTTACTTTGGTCACAGATAGTGGATACGCAAGGACAGGTGAAGATGTTG TGTGGGAAACCTTTGACTCGCAAACAGTTGAGACAGGCAATGGTGAACTTTGTGCAGCTA ACTTCATTCCTGCTGTTTATGTTTTGAATCAAAGAAAGGAGGAGAAAAAAAAACGCGCTA AAGATGATGAACAATATGCCAAGAGACTAGCGAAAGAAGAAGAAGAAAGAGGAAAAAAGG AGACTCCTAAAAAGGCTTCCAACACTCCTCGTCGTAACAAATCCAATACCCAGAAATCAC GTAAGCAAAGCGAAAACTGTTTAATTTCGTGATGAAACATGATACTTAGAGGATCTGTCT TTTATATTTTTATTTTTTGTATTCGCTCTAGTGAAAGCGTATGCATTTACTACATTTATT CCATAGTTTCTTTTACGTCAACAATTATTAATTAATATTGAAATCTCCTAAA
  • Download Fasta

  • Fasta :-

    MDNVQEHDPDTQEHNNETQNHKQEDHSNSYQTRTIPFIEPLSREYQKRIILCQTVNGPCP IIALSNALILKSNVDRPFELPKKRYITPDELTEYLVEFAKAYGLCKNQQSLQDKLTSMHF GQQLNPCLYDIEKFEYGHEIFCTFGVRLVHGWILSDDMGLSDEDLSYLRKLEYYEKVADT FAERRSLLEMQEPLTEQQQDFLNNSTCVDKVMENRYTMQFLTNAGLKKILELVGPGEIVV VFRSSHFSTMYSNPDSFAQFTLVTDSGYARTGEDVVWETFDSQTVETGNGELCAANFIPA VYVLNQRKEEKKKRAKDDEQYAKRLAKEEEERGKKETPKKASNTPRRNKSNTQKSRKQSE NCLIS

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC12G12.11c161 SDMGLSDEDL0.995unspSPAC12G12.11c355 SNTQKSRKQS0.997unsp

SPAC12G12.11c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India