SPAC13A11.05 | peptidase family M17 cytoplasmic leucyl aminopeptidase yspII (LAP yspII)

_IDPredictionOTHERSPmTPCS_Position
SPAC13A11.05mTP0.3493430.0532760.597381CS pos: 26-27. IPL-AT. Pr: 0.3746
No Results

  • Fasta :-

    >SPAC13A11.05 MKGLGLSTRTFNWSSLSSILLPRIPLATTKADSLILAVRHDKQVFSEDYRQVVDQYFETS PKKNDIRLFWNTQGFVRLAIVQLEENVSEKSVRSAAAEAAKILKSNGAKSIAVDGMGFPK DAALGAALATYDFSLRRDHLSVYQDEKVVEKENLFTSPAPERLTFQLLSNTSEKKTATAE ENAFKVGLIEAAAQNLARSLMECPANYMTSLQFCHFAQELFQNSSKVKVFVHDEKWIDEQ KMNGLLTVNAGSDIPPRFLEVQYIGKEKSKDDGWLGLVGKGVTFDSGGISIKPSQNMKEM RADMGGAAVMLSSIYALEQLSIPVNAVFVTPLTENLPSGSAAKPGDVIFMRNGLSVEIDN TDAEGRLILADAVHYVSSQYKTKAVIEASTLTGAMLVALGNVFTGAFVQGEELWKNLETA SHDAGDLFWRMPFHEAYLKQLTSSSNADLCNVSRAGGGCCTAAAFIKCFLAQKDLSFAHL DIAGVMDKQLNSWDCDGMSGRPVRTIIEVARKY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/803 Sequence name : 803 Sequence length : 513 VALUES OF COMPUTED PARAMETERS Coef20 : 4.596 CoefTot : 0.478 ChDiff : -6 ZoneTo : 31 KR : 4 DE : 0 CleavSite : 19 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.753 1.588 0.388 0.645 MesoH : -0.175 0.457 -0.303 0.265 MuHd_075 : 31.154 24.758 8.106 8.245 MuHd_095 : 23.473 15.258 6.720 4.754 MuHd_100 : 26.781 12.094 6.762 4.015 MuHd_105 : 30.001 11.971 7.171 5.078 Hmax_075 : 16.567 15.633 2.849 5.332 Hmax_095 : 11.900 16.200 1.523 3.790 Hmax_100 : 13.000 14.200 0.770 4.000 Hmax_105 : 11.900 11.433 0.770 4.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0850 0.9150 DFMC : 0.0925 0.9075 This protein is probably imported in chloroplast. f(Ser) = 0.1613 f(Arg) = 0.0645 CMi = 1.00604 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 513 SPAC13A11.05 MKGLGLSTRTFNWSSLSSILLPRIPLATTKADSLILAVRHDKQVFSEDYRQVVDQYFETSPKKNDIRLFWNTQGFVRLAI 80 VQLEENVSEKSVRSAAAEAAKILKSNGAKSIAVDGMGFPKDAALGAALATYDFSLRRDHLSVYQDEKVVEKENLFTSPAP 160 ERLTFQLLSNTSEKKTATAEENAFKVGLIEAAAQNLARSLMECPANYMTSLQFCHFAQELFQNSSKVKVFVHDEKWIDEQ 240 KMNGLLTVNAGSDIPPRFLEVQYIGKEKSKDDGWLGLVGKGVTFDSGGISIKPSQNMKEMRADMGGAAVMLSSIYALEQL 320 SIPVNAVFVTPLTENLPSGSAAKPGDVIFMRNGLSVEIDNTDAEGRLILADAVHYVSSQYKTKAVIEASTLTGAMLVALG 400 NVFTGAFVQGEELWKNLETASHDAGDLFWRMPFHEAYLKQLTSSSNADLCNVSRAGGGCCTAAAFIKCFLAQKDLSFAHL 480 DIAGVMDKQLNSWDCDGMSGRPVRTIIEVARKY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC13A11.05 2 -----MK|GL 0.086 . SPAC13A11.05 9 GLGLSTR|TF 0.088 . SPAC13A11.05 23 SSILLPR|IP 0.077 . SPAC13A11.05 30 IPLATTK|AD 0.069 . SPAC13A11.05 39 SLILAVR|HD 0.092 . SPAC13A11.05 42 LAVRHDK|QV 0.160 . SPAC13A11.05 50 VFSEDYR|QV 0.132 . SPAC13A11.05 62 YFETSPK|KN 0.063 . SPAC13A11.05 63 FETSPKK|ND 0.078 . SPAC13A11.05 67 PKKNDIR|LF 0.086 . SPAC13A11.05 77 NTQGFVR|LA 0.108 . SPAC13A11.05 90 EENVSEK|SV 0.119 . SPAC13A11.05 93 VSEKSVR|SA 0.185 . SPAC13A11.05 101 AAAEAAK|IL 0.067 . SPAC13A11.05 104 EAAKILK|SN 0.097 . SPAC13A11.05 109 LKSNGAK|SI 0.116 . SPAC13A11.05 120 DGMGFPK|DA 0.077 . SPAC13A11.05 136 TYDFSLR|RD 0.074 . SPAC13A11.05 137 YDFSLRR|DH 0.116 . SPAC13A11.05 147 SVYQDEK|VV 0.074 . SPAC13A11.05 151 DEKVVEK|EN 0.056 . SPAC13A11.05 162 TSPAPER|LT 0.102 . SPAC13A11.05 174 LSNTSEK|KT 0.082 . SPAC13A11.05 175 SNTSEKK|TA 0.148 . SPAC13A11.05 185 AEENAFK|VG 0.056 . SPAC13A11.05 198 AAQNLAR|SL 0.172 . SPAC13A11.05 226 LFQNSSK|VK 0.057 . SPAC13A11.05 228 QNSSKVK|VF 0.077 . SPAC13A11.05 235 VFVHDEK|WI 0.071 . SPAC13A11.05 241 KWIDEQK|MN 0.062 . SPAC13A11.05 257 GSDIPPR|FL 0.130 . SPAC13A11.05 266 EVQYIGK|EK 0.064 . SPAC13A11.05 268 QYIGKEK|SK 0.098 . SPAC13A11.05 270 IGKEKSK|DD 0.083 . SPAC13A11.05 280 WLGLVGK|GV 0.076 . SPAC13A11.05 292 SGGISIK|PS 0.067 . SPAC13A11.05 298 KPSQNMK|EM 0.075 . SPAC13A11.05 301 QNMKEMR|AD 0.146 . SPAC13A11.05 343 PSGSAAK|PG 0.069 . SPAC13A11.05 351 GDVIFMR|NG 0.088 . SPAC13A11.05 366 NTDAEGR|LI 0.076 . SPAC13A11.05 381 YVSSQYK|TK 0.077 . SPAC13A11.05 383 SSQYKTK|AV 0.097 . SPAC13A11.05 415 QGEELWK|NL 0.067 . SPAC13A11.05 430 AGDLFWR|MP 0.077 . SPAC13A11.05 439 FHEAYLK|QL 0.057 . SPAC13A11.05 454 DLCNVSR|AG 0.094 . SPAC13A11.05 467 TAAAFIK|CF 0.072 . SPAC13A11.05 473 KCFLAQK|DL 0.069 . SPAC13A11.05 488 IAGVMDK|QL 0.063 . SPAC13A11.05 501 CDGMSGR|PV 0.165 . SPAC13A11.05 504 MSGRPVR|TI 0.363 . SPAC13A11.05 511 TIIEVAR|KY 0.106 . SPAC13A11.05 512 IIEVARK|Y- 0.089 . ____________________________^_________________

  • Fasta :-

    >SPAC13A11.05 CCCTTGCCCAATCTGCAATCGGACATCGTATTTTATTTTTGCATACTGAATTTACGTGTA TTCGTAGTTTCACGAGTTAACGATTTTCGAATATCCAACTCTCATTGAACTTATAATAAT CCGTAATCCTTTACCTTTTTTTTGATTACAAGTGTCTAATTAAGTTTTCTAAATCAAGAG AAATCAAAGATACAAGCAAAGCTTTTTTTCTTACGTACAATGAAGGGTTTAGGTCTAAGT ACGAGAACCTTTAATTGGAGCTCACTTTCTTCCATTCTTTTACCAAGAATTCCTTTAGCT ACTACAAAAGCCGATTCCTTGATTTTGGCTGTTCGTCACGATAAACAAGTTTTTTCTGAA GATTATCGACAAGTTGTTGACCAGTATTTTGAAACATCTCCCAAAAAAAATGACATTCGT CTCTTTTGGAACACTCAGGGTTTTGTTCGTCTTGCCATAGTCCAGCTTGAAGAAAACGTT TCTGAAAAGTCCGTTCGTTCAGCTGCTGCAGAGGCAGCTAAGATTTTAAAGTCGAATGGT GCAAAGTCGATAGCTGTCGATGGTATGGGTTTTCCCAAGGATGCTGCCTTGGGTGCTGCC TTGGCCACGTACGATTTTTCTCTTCGTAGAGACCATTTGAGCGTCTATCAAGATGAAAAG GTGGTTGAAAAGGAAAATTTATTTACCTCTCCTGCTCCTGAAAGGTTAACTTTCCAATTG CTTAGCAACACATCTGAGAAGAAAACTGCAACCGCAGAGGAGAATGCTTTTAAGGTAGGT TTGATTGAAGCAGCTGCTCAAAACTTGGCTCGTTCTCTTATGGAATGTCCTGCTAATTAC ATGACTTCTCTTCAATTTTGTCATTTTGCTCAAGAGTTATTCCAAAATTCCTCAAAGGTT AAAGTATTCGTTCACGATGAGAAGTGGATTGATGAGCAAAAGATGAACGGTTTACTTACC GTGAATGCTGGTTCCGATATTCCACCTCGTTTCTTAGAAGTACAATACATTGGTAAAGAA AAATCAAAAGATGATGGATGGCTTGGTTTAGTTGGAAAAGGTGTAACGTTTGACAGCGGT GGTATCAGTATCAAGCCTTCTCAAAACATGAAGGAGATGCGTGCTGATATGGGTGGTGCT GCTGTTATGCTTTCCTCTATTTATGCCTTGGAACAACTTTCCATCCCCGTGAATGCCGTG TTTGTTACCCCTTTAACTGAGAATCTTCCTTCTGGCTCTGCTGCTAAGCCAGGAGATGTT ATTTTTATGCGCAACGGTCTTAGTGTAGAAATTGATAACACTGACGCTGAGGGTCGTCTT ATTCTTGCCGATGCAGTTCACTATGTCTCTTCTCAGTATAAGACCAAGGCTGTGATTGAA GCCAGCACATTAACTGGTGCTATGCTAGTAGCCCTCGGTAATGTATTTACTGGTGCATTT GTTCAAGGAGAAGAGTTGTGGAAGAATCTTGAAACTGCTTCCCATGATGCTGGAGACCTT TTCTGGCGTATGCCATTTCACGAGGCTTACCTCAAGCAACTTACAAGTTCTTCAAATGCT GATTTGTGCAATGTTAGTCGTGCCGGTGGTGGTTGTTGTACAGCGGCTGCCTTTATTAAA TGCTTCTTAGCCCAGAAAGATTTGTCTTTTGCTCATTTAGACATTGCCGGAGTTATGGAT AAGCAGCTTAATTCTTGGGATTGTGACGGCATGAGCGGACGCCCAGTTCGCACTATTATT GAAGTCGCTCGCAAGTATTAGCTTATTTATTTTCTTGGCTATATGTGCAAACTTTATGTT TTTACTTATTTACTGTTGATTACACCAATCTCATTTTTCAATGTCCTTGTTAAGTGTATG TCAATGATATGTAGCTATCATGATTTTATTCTTTTTAATACTGTTTTCCACAACCGTTCA TAACGGTTGTAAGGACCGAGTCTTTCTGATGGCTCTGGTTCTGTTTCCTTTAAAAATAAA ATCAATTCGGTTGAAGTCTCATGTTGTTAAATTTCACTTTCGAAGTAGCGAATTTTTTTT TTCTATTTTGAATATAGATTTGTTTATTAAATGTAGTAATCAATTTACTCATGACTATTA CTTTTGTCAAACAAAATCATAATACAAAAC
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  • Fasta :-

    MKGLGLSTRTFNWSSLSSILLPRIPLATTKADSLILAVRHDKQVFSEDYRQVVDQYFETS PKKNDIRLFWNTQGFVRLAIVQLEENVSEKSVRSAAAEAAKILKSNGAKSIAVDGMGFPK DAALGAALATYDFSLRRDHLSVYQDEKVVEKENLFTSPAPERLTFQLLSNTSEKKTATAE ENAFKVGLIEAAAQNLARSLMECPANYMTSLQFCHFAQELFQNSSKVKVFVHDEKWIDEQ KMNGLLTVNAGSDIPPRFLEVQYIGKEKSKDDGWLGLVGKGVTFDSGGISIKPSQNMKEM RADMGGAAVMLSSIYALEQLSIPVNAVFVTPLTENLPSGSAAKPGDVIFMRNGLSVEIDN TDAEGRLILADAVHYVSSQYKTKAVIEASTLTGAMLVALGNVFTGAFVQGEELWKNLETA SHDAGDLFWRMPFHEAYLKQLTSSSNADLCNVSRAGGGCCTAAAFIKCFLAQKDLSFAHL DIAGVMDKQLNSWDCDGMSGRPVRTIIEVARKY

  • title: Substrate-binding/catalytic site
  • coordinates: K280,D285,K292,D303,D362,E364,R366,L391
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC13A11.0560 SYFETSPKKN0.994unspSPAC13A11.05269 SGKEKSKDDG0.992unsp

SPAC13A11.05      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India