SPAC13C5.01c | 20S proteasome complex subunit alpha 3 Pre9 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC13C5.01cOTHER0.9999550.0000280.000017
No Results

  • Fasta :-

    >SPAC13C5.01c MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEE SAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQG YTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYK DDINLDEASAMAVKFLSKTLDSNSLTHEKIEFATITKDTTKNKMVCKIWKSDEINEVLNK YQETQRQS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/436 Sequence name : 436 Sequence length : 248 VALUES OF COMPUTED PARAMETERS Coef20 : 4.132 CoefTot : 0.202 ChDiff : -3 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.741 1.741 0.110 0.614 MesoH : -0.867 0.372 -0.452 0.226 MuHd_075 : 20.106 5.979 3.378 6.030 MuHd_095 : 12.223 6.956 2.280 2.403 MuHd_100 : 17.993 12.014 3.367 4.879 MuHd_105 : 15.996 13.073 2.936 5.307 Hmax_075 : 5.717 -0.700 -0.582 1.400 Hmax_095 : -2.187 0.000 -2.391 0.300 Hmax_100 : 9.800 4.200 0.016 2.170 Hmax_105 : -2.000 2.500 -1.708 1.132 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9217 0.0783 DFMC : 0.9307 0.0693
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 248 SPAC13C5.01c MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLT 80 ADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQ 160 ANSIGGNSTSVQSLMRQEYKDDINLDEASAMAVKFLSKTLDSNSLTHEKIEFATITKDTTKNKMVCKIWKSDEINEVLNK 240 YQETQRQS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC13C5.01c 3 ----MSR|SY 0.129 . SPAC13C5.01c 8 SRSYDSR|TT 0.127 . SPAC13C5.01c 17 IFSPEGR|LY 0.089 . SPAC13C5.01c 40 ALGIVAK|DG 0.070 . SPAC13C5.01c 49 IVLAAEK|KV 0.063 . SPAC13C5.01c 50 VLAAEKK|VT 0.119 . SPAC13C5.01c 54 EKKVTSK|LL 0.082 . SPAC13C5.01c 64 QEESAEK|LY 0.060 . SPAC13C5.01c 91 ILINYAR|RV 0.199 . SPAC13C5.01c 92 LINYARR|VG 0.154 . SPAC13C5.01c 112 PCEQLVR|RV 0.102 . SPAC13C5.01c 113 CEQLVRR|VC 0.130 . SPAC13C5.01c 118 RRVCDLK|QG 0.070 . SPAC13C5.01c 128 TQYGGLR|PF 0.097 . SPAC13C5.01c 143 AGWDHIR|GY 0.087 . SPAC13C5.01c 176 SVQSLMR|QE 0.079 . SPAC13C5.01c 180 LMRQEYK|DD 0.071 . SPAC13C5.01c 194 ASAMAVK|FL 0.083 . SPAC13C5.01c 198 AVKFLSK|TL 0.060 . SPAC13C5.01c 209 NSLTHEK|IE 0.058 . SPAC13C5.01c 217 EFATITK|DT 0.069 . SPAC13C5.01c 221 ITKDTTK|NK 0.062 . SPAC13C5.01c 223 KDTTKNK|MV 0.097 . SPAC13C5.01c 227 KNKMVCK|IW 0.073 . SPAC13C5.01c 230 MVCKIWK|SD 0.107 . SPAC13C5.01c 240 INEVLNK|YQ 0.075 . SPAC13C5.01c 246 KYQETQR|QS 0.086 . ____________________________^_________________

  • Fasta :-

    >SPAC13C5.01c GCATTTTCGAACTTGTCATCAACCAAATTCATTATGTCAAGAAGCTACGATTCTCGCACG ACTATTTTTTCACCTGAAGGTCGTTTATACCAGGTTGAATATGCATTGGAAGCGATCAAC CATGCTGGCGTTGCTTTAGGGATTGTAGCTAAAGATGGAATTGTTTTAGCTGCTGAAAAG AAGGTTACCAGCAAACTATTAGAACAAGAAGAATCCGCAGAAAAGTTATATCATATAGGA GACAATATGTTATGTGCTGTGGCAGGGCTTACCGCAGATGCAAACATCCTAATTAACTAC GCTAGAAGGGTTGGGCAACAATACTTGCAGACTTTTAATGAAGAGATGCCTTGTGAGCAA TTAGTTCGTCGCGTTTGTGACCTCAAACAAGGTTATACACAGTATGGTGGGCTACGTCCA TTCGGTGTTTCATTCTTATATGCTGGATGGGATCATATTCGTGGATATCAGCTATTCCAA TCTAATCCATCTGGAAATTACGGAAGCTGGCAAGCAAATAGTATCGGAGGAAATAGTACT AGTGTTCAAAGCTTAATGCGACAGGAGTATAAGGATGATATAAACTTAGATGAGGCTTCT GCTATGGCCGTGAAATTTTTGAGTAAAACGTTGGACAGTAACTCCCTAACTCATGAAAAA ATTGAATTTGCAACAATAACAAAGGATACCACGAAAAACAAAATGGTTTGCAAAATATGG AAGTCAGATGAAATAAATGAAGTGCTCAATAAGTACCAAGAGACCCAGCGGCAATCTTAA TATTGCCTTACTCAATTCATTGGGAAAACACTTTAAGTGTATAGCTGTTTTTTATAGCTT TCGTCGTTACCCTTTAATCTCCTTGTAATTAGCTCATGGTTTTTGTAAACAATTTGAAGC AAACTAAGTTCCATCATGAGCCTTATTCCGTCTCAATATAGGCTTGCTTTCTTTTTATCT ACGCTAAATCATTATCTTATGAATTCTTATGCCGTTTTAAAAAAGGCTTTTTTCAAGTTT CTTTTATACTTAGACCTTTCTTTCTCATTCCCTTCATAACGTCAATTTCTACTTGAGTAC ACCATTCCGGCATATTTAAAATTATAGTATTTCCAATGGAATGTCAATGACTCTCATATG TTCTAAACTATATGCTTAGTTTTCATAACTGAAGATTTTAAACGGTGTAGCATATTCCAA TTCTATACTATTTATAAAAATAAGAGAAAACTTTTTGATGAGTATTATTAACTTTCACTT ACATATTGAAGGATAAAAAAAATAACTATTGATATCTAAAAAAGGAATAGTAAAACAAAT AATCTAATAAT
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  • Fasta :-

    MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEE SAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQG YTQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYK DDINLDEASAMAVKFLSKTLDSNSLTHEKIEFATITKDTTKNKMVCKIWKSDEINEVLNK YQETQRQS

  • title: active site
  • coordinates: G32,E48,K50,K64,G166
No Results
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India