SPAC1952.03 | ubiquitin specific cysteine protease, OTU family, Otu2

_IDPredictionOTHERSPmTPCS_Position
SPAC1952.03OTHER0.9992570.0000030.000740
No Results

  • Fasta :-

    >SPAC1952.03 MRCPLAYYYTQTTIPTQQKRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRA LQQKISQMEADLSQKHATERQKLDKGDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQ SSLNTKENTPQQPKKSRNRQKERLERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKIL EEAGLVAVDIPADGNCLFASISHQLNYHHNVKLNSQALRNKSADYVLKHCEQFEGFLLDE ESGEVLPVSDYCNEIRNNSKWGSDIEIQALANSLEVPVHVYNTEGPVLKFNPSTVKFEKP LCIAYYQHLFGLGAHYNSLLYRDN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/570 Sequence name : 570 Sequence length : 324 VALUES OF COMPUTED PARAMETERS Coef20 : 3.904 CoefTot : -1.249 ChDiff : 3 ZoneTo : 25 KR : 6 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.588 1.318 0.039 0.494 MesoH : -0.907 -0.086 -0.531 0.156 MuHd_075 : 19.766 14.195 4.863 5.487 MuHd_095 : 21.199 11.540 4.961 4.253 MuHd_100 : 17.046 8.333 3.789 3.806 MuHd_105 : 17.051 7.712 5.410 3.684 Hmax_075 : 13.883 11.317 1.707 4.468 Hmax_095 : -0.100 -3.700 -3.174 0.230 Hmax_100 : -2.000 -4.300 0.678 0.540 Hmax_105 : -7.400 2.600 0.678 -0.780 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4465 0.5535 DFMC : 0.5991 0.4009
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 324 SPAC1952.03 MRCPLAYYYTQTTIPTQQKRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKHATER 80 QKLDKGDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSLNTKENTPQQPKKSRNRQKERLERRKAEMKKMSEQAEL 160 ESEKMADLKNEEKKKFSKILEEAGLVAVDIPADGNCLFASISHQLNYHHNVKLNSQALRNKSADYVLKHCEQFEGFLLDE 240 ESGEVLPVSDYCNEIRNNSKWGSDIEIQALANSLEVPVHVYNTEGPVLKFNPSTVKFEKPLCIAYYQHLFGLGAHYNSLL 320 YRDN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC1952.03 2 -----MR|CP 0.084 . SPAC1952.03 19 TIPTQQK|RK 0.068 . SPAC1952.03 20 IPTQQKR|KS 0.241 . SPAC1952.03 21 PTQQKRK|SK 0.139 . SPAC1952.03 23 QQKRKSK|KM 0.158 . SPAC1952.03 24 QKRKSKK|ME 0.120 . SPAC1952.03 31 MEELLSK|QR 0.060 . SPAC1952.03 33 ELLSKQR|EE 0.081 . SPAC1952.03 37 KQREECK|EL 0.070 . SPAC1952.03 42 CKELQSK|IT 0.058 . SPAC1952.03 47 SKITNLR|KQ 0.077 . SPAC1952.03 48 KITNLRK|QL 0.081 . SPAC1952.03 51 NLRKQLK|EG 0.068 . SPAC1952.03 55 QLKEGNK|KQ 0.061 . SPAC1952.03 56 LKEGNKK|QK 0.093 . SPAC1952.03 58 EGNKKQK|RA 0.082 . SPAC1952.03 59 GNKKQKR|AL 0.347 . SPAC1952.03 64 KRALQQK|IS 0.072 . SPAC1952.03 75 EADLSQK|HA 0.062 . SPAC1952.03 80 QKHATER|QK 0.111 . SPAC1952.03 82 HATERQK|LD 0.063 . SPAC1952.03 85 ERQKLDK|GD 0.084 . SPAC1952.03 110 QQMEDTK|IT 0.069 . SPAC1952.03 116 KITTAEK|SS 0.066 . SPAC1952.03 126 QSSLNTK|EN 0.077 . SPAC1952.03 134 NTPQQPK|KS 0.057 . SPAC1952.03 135 TPQQPKK|SR 0.197 . SPAC1952.03 137 QQPKKSR|NR 0.090 . SPAC1952.03 139 PKKSRNR|QK 0.109 . SPAC1952.03 141 KSRNRQK|ER 0.072 . SPAC1952.03 143 RNRQKER|LE 0.100 . SPAC1952.03 146 QKERLER|RK 0.185 . SPAC1952.03 147 KERLERR|KA 0.215 . SPAC1952.03 148 ERLERRK|AE 0.088 . SPAC1952.03 152 RRKAEMK|KM 0.072 . SPAC1952.03 153 RKAEMKK|MS 0.204 . SPAC1952.03 164 AELESEK|MA 0.065 . SPAC1952.03 169 EKMADLK|NE 0.068 . SPAC1952.03 173 DLKNEEK|KK 0.059 . SPAC1952.03 174 LKNEEKK|KF 0.186 . SPAC1952.03 175 KNEEKKK|FS 0.139 . SPAC1952.03 178 EKKKFSK|IL 0.077 . SPAC1952.03 212 NYHHNVK|LN 0.075 . SPAC1952.03 219 LNSQALR|NK 0.106 . SPAC1952.03 221 SQALRNK|SA 0.129 . SPAC1952.03 228 SADYVLK|HC 0.081 . SPAC1952.03 256 DYCNEIR|NN 0.101 . SPAC1952.03 260 EIRNNSK|WG 0.081 . SPAC1952.03 289 TEGPVLK|FN 0.066 . SPAC1952.03 296 FNPSTVK|FE 0.056 . SPAC1952.03 299 STVKFEK|PL 0.074 . SPAC1952.03 322 YNSLLYR|DN 0.154 . ____________________________^_________________

  • Fasta :-

    >SPAC1952.03 GTTTATCAGCGGGCATACATTTGTTGAACGACGGGGTGTATTATATGGGTATCAAAGAAT TTGGTATTTGGAAACAGGAGTCTAATTGTATATAAATAATTAATAAATTATTAGAATTGA ATTGTTTTACAAATTAAATGATGTTTAATAGGATCCTAGTAAAGAATATATATTTTATTA TAAAACTCTGCATTGGATGATTGAATGTTTACAAAATGAATAAAAGGCTATGCATGGAAA GGGAATATTATACTATGTAAATATAATGTCTAAATGAATTAAATTGGAAGCATCGAATGA GATGTCCATTAGCATATTATTACACTCAAACTACCATACCAACTCAACAAAAACGAAAGT CTAAAAAAATGGAGGAATTGTTAAGTAAGCAACGGGAAGAATGTAAAGAACTTCAAAGCA AAATTACAAACCTTCGTAAACAACTAAAGGAAGGAAATAAAAAACAAAAAAGGGCTTTGC AGCAAAAAATCTCACAAATGGAAGCCGATTTATCACAAAAACATGCTACAGAACGACAAA AATTGGATAAAGGCGATGAAGAGACAAATGAAACGCAGCAAGAAGATCTCCTCAATACGC TTTTACAACAGATGGAAGATACGAAAATTACGACGGCAGAAAAATCATCAGTTCAGTCCT CATTGAATACTAAAGAAAATACACCGCAACAGCCTAAAAAGTCTAGGAATAGACAAAAAG AGCGACTTGAACGACGTAAAGCAGAGATGAAAAAAATGTCTGAGCAGGCAGAGCTAGAGT CAGAAAAAATGGCTGATCTCAAAAATGAAGAGAAAAAAAAGTTTTCAAAAATCCTTGAGG AAGCTGGACTTGTTGCAGTCGATATACCAGCGGATGGAAATTGTTTATTTGCTTCCATTT CACATCAGTTAAATTATCATCATAATGTTAAACTAAATAGCCAAGCTCTTCGTAATAAAT CCGCTGATTATGTATTAAAGCACTGCGAACAGTTTGAAGGCTTTTTGCTAGACGAAGAAT CTGGAGAAGTTTTGCCAGTATCCGATTATTGTAACGAAATTCGAAACAATAGCAAATGGG GAAGTGATATTGAAATACAGGCATTAGCAAACTCTCTTGAGGTTCCTGTTCATGTCTACA ACACAGAAGGTCCAGTTTTAAAGTTTAACCCCTCAACGGTCAAGTTCGAAAAACCGTTGT GTATAGCATATTACCAGCATTTGTTTGGGCTTGGCGCTCACTATAATAGTTTATTATATC GGGACAATTAAAAAGATCTAATGAGATGCTTTAGATAGGTTTTTATCCTTTGGTTTATTA GCTTCCTTCCTCGCCGGAAACCATTTAAAAAGGCTGTGCCTTACGAGTTAGATTATATGA ATAATATTTATGAATTAAAACTCTTCTGTATTCTATTAATCAAAAAAAAAAATTAGCCAT
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  • Fasta :-

    MRCPLAYYYTQTTIPTQQKRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRA LQQKISQMEADLSQKHATERQKLDKGDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQ SSLNTKENTPQQPKKSRNRQKERLERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKIL EEAGLVAVDIPADGNCLFASISHQLNYHHNVKLNSQALRNKSADYVLKHCEQFEGFLLDE ESGEVLPVSDYCNEIRNNSKWGSDIEIQALANSLEVPVHVYNTEGPVLKFNPSTVKFEKP LCIAYYQHLFGLGAHYNSLLYRDN

    No Results
No Results
No Results
IDSitePeptideScoreMethod
SPAC1952.0322 SQKRKSKKME0.998unsp

SPAC1952.03      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India