SPAC19B12.08 | Atg8 deconjugator Atg4 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC19B12.08OTHER0.9966900.0006400.002671
No Results

  • Fasta :-

    >SPAC19B12.08 MELMARFLERYLHFAPTNTEPPGTLIWFLGHSYKIEDSQWPEKFLYDSFSLITITYRSGI EGLENMTSDTGWGCMIRSTQTLLANCLRICYPEKQLKEILALFADEPSAPFSIHQFVTMG KTLCDINPGQWFGPTTSCSCVARLSDQNPDVPLHVYVARNGNAIYRDQLSKVSFPVLLLI PTRLGIDSINESYYDQLLQVFEIRSFVGITGGRPRSAHYFYARQNQYFFYLDPHCTHFAH TTTQPASEETFHSATLRRVAIQDLDPCMIFGFLIRDEEEWHSFEANQKYFADIVQIFDSE PQPVETHDDFVLDENVEDHL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/21 Sequence name : 21 Sequence length : 320 VALUES OF COMPUTED PARAMETERS Coef20 : 3.977 CoefTot : 0.000 ChDiff : -19 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.776 1.282 0.026 0.459 MesoH : -0.387 0.198 -0.292 0.177 MuHd_075 : 17.352 8.243 2.170 4.580 MuHd_095 : 45.043 24.729 11.642 9.052 MuHd_100 : 41.532 22.676 10.104 8.418 MuHd_105 : 37.033 18.825 8.207 7.300 Hmax_075 : 5.500 8.400 -0.680 3.830 Hmax_095 : 16.400 16.600 2.313 6.020 Hmax_100 : 15.400 13.700 1.666 4.980 Hmax_105 : 11.500 8.925 -0.313 4.270 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7691 0.2309 DFMC : 0.8882 0.1118
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 320 SPAC19B12.08 MELMARFLERYLHFAPTNTEPPGTLIWFLGHSYKIEDSQWPEKFLYDSFSLITITYRSGIEGLENMTSDTGWGCMIRSTQ 80 TLLANCLRICYPEKQLKEILALFADEPSAPFSIHQFVTMGKTLCDINPGQWFGPTTSCSCVARLSDQNPDVPLHVYVARN 160 GNAIYRDQLSKVSFPVLLLIPTRLGIDSINESYYDQLLQVFEIRSFVGITGGRPRSAHYFYARQNQYFFYLDPHCTHFAH 240 TTTQPASEETFHSATLRRVAIQDLDPCMIFGFLIRDEEEWHSFEANQKYFADIVQIFDSEPQPVETHDDFVLDENVEDHL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC19B12.08 6 -MELMAR|FL 0.115 . SPAC19B12.08 10 MARFLER|YL 0.142 . SPAC19B12.08 34 FLGHSYK|IE 0.071 . SPAC19B12.08 43 DSQWPEK|FL 0.076 . SPAC19B12.08 57 LITITYR|SG 0.123 . SPAC19B12.08 77 GWGCMIR|ST 0.142 . SPAC19B12.08 88 LLANCLR|IC 0.084 . SPAC19B12.08 94 RICYPEK|QL 0.071 . SPAC19B12.08 97 YPEKQLK|EI 0.066 . SPAC19B12.08 121 QFVTMGK|TL 0.072 . SPAC19B12.08 143 SCSCVAR|LS 0.180 . SPAC19B12.08 159 LHVYVAR|NG 0.105 . SPAC19B12.08 166 NGNAIYR|DQ 0.093 . SPAC19B12.08 171 YRDQLSK|VS 0.065 . SPAC19B12.08 183 LLLIPTR|LG 0.082 . SPAC19B12.08 204 LQVFEIR|SF 0.124 . SPAC19B12.08 213 VGITGGR|PR 0.075 . SPAC19B12.08 215 ITGGRPR|SA 0.193 . SPAC19B12.08 223 AHYFYAR|QN 0.086 . SPAC19B12.08 257 FHSATLR|RV 0.124 . SPAC19B12.08 258 HSATLRR|VA 0.198 . SPAC19B12.08 275 IFGFLIR|DE 0.097 . SPAC19B12.08 288 SFEANQK|YF 0.076 . ____________________________^_________________

  • Fasta :-

    >SPAC19B12.08 GTTATTTAGCAGACCATAGTAGTACTCGCAAACATGACTTCACTCCCACCATATCTTATC CCAAACACTATATTAATCAAGTTAGCCTTTGCTTAGTCTAAAGGGGGTGTATGTACGCTT TCATGTGAACATCTGACGACGTGAAGTTTGGTTTAAATATTTTGAGAAAAAATAAAGGTA ATAGAAAAAAATTTCAAAAAGGGGAATGGAGCTTATGGCTCGCTTTCTAGAGCGATATTT ACATTTTGCACCGACAAACACCGAGCCTCCAGGGACATTAATTTGGTTTTTAGGACATTC TTACAAAATTGAAGATAGCCAATGGCCTGAAAAATTTTTATACGACTCATTCTCTCTTAT TACAATCACTTATCGTAGTGGTATTGAAGGGCTTGAAAATATGACATCTGACACCGGTTG GGGTTGTATGATTCGATCCACTCAGACACTATTAGCAAATTGTTTACGAATCTGCTATCC TGAAAAACAATTGAAAGAAATATTGGCACTATTTGCTGATGAGCCTTCAGCCCCTTTTTC TATCCATCAATTTGTTACAATGGGCAAAACTTTGTGCGATATTAATCCAGGGCAATGGTT TGGACCTACAACATCTTGTTCTTGTGTTGCTCGATTAAGTGATCAGAACCCGGACGTCCC ATTACACGTTTATGTTGCCAGGAATGGAAATGCTATATACCGAGATCAACTTTCAAAGGT CTCCTTTCCTGTTTTACTTTTAATTCCTACCCGTTTAGGAATTGATTCAATTAATGAATC ATACTACGATCAGTTGCTTCAGGTGTTTGAAATTCGTTCATTTGTTGGCATCACTGGAGG TCGTCCAAGGTCTGCTCATTACTTTTATGCAAGACAAAATCAGTACTTTTTTTATCTGGA TCCTCATTGTACTCACTTTGCTCACACTACCACCCAGCCTGCTTCCGAGGAAACTTTTCA TAGTGCTACTTTACGAAGAGTAGCAATACAAGATCTTGATCCCTGTATGATCTTTGGGTT CTTAATTCGAGATGAAGAAGAATGGCATTCATTTGAAGCGAATCAAAAATATTTTGCCGA CATAGTTCAGATTTTCGACTCCGAACCTCAACCAGTCGAGACACATGATGATTTCGTTTT GGATGAGAATGTTGAAGATCATCTTTAATCCATTGTTTACTACTGTTTCAAGTTTTATTT ATAAATTTGAAATTATAATACTAACGACTTCGCATTTATGACATATGTAATTATGAACTG ACCCTAGTAGCATTTACGCTTTGGGTTTAGTAACTTAATGAATAATTATTTATCCAACGT TTTTCAAGGAAATTTATTATCCCGGTTTCTTGAATTCCTTCTCCATCCCAAATCGGCTAA AGGGATATTTTTTTAATCGTTAAGCGTTTAGTTGTGCTTGTGCTATTATTTGGTCAGTGT TTCCCTTCTATTCAACCGGTCTCCTTATTGTTAATTTCATGCTTTATCTTTGAAAACTGT TAAACAATGAGTCTGTTTGATTTTTTATTAAATGTGCGTATTTGAAATGGATGTTTATGT GTTATATTTCGTGAGGATTTTGTTCTTGTTTTTAATGTCTCTTTGTTACGCTTTTCTTTT CATCTGATGTTCTTCCCTGTGAGTAAATTTCAAAAACTTATATTATACAATGTGCATTAC TAAGATGATTGGACAGCAATCTCAGAATTTCTCATTTCTTTGCTTTTGCTTACCTGAGAT AAATATTGTGATCTTCTCAAATGCCCTTTCCTGAGCTACTTAGCTTAAAGTTATTTAAGT AATAATAAATTAAAGCATATTCTTTTTTTTTTATTACGGGTATTCTGATCGAGCCTTTTC TCTATTTTAGTATATCAGTTAAACTAAAGAGTAA
  • Download Fasta

  • Fasta :-

    MELMARFLERYLHFAPTNTEPPGTLIWFLGHSYKIEDSQWPEKFLYDSFSLITITYRSGI EGLENMTSDTGWGCMIRSTQTLLANCLRICYPEKQLKEILALFADEPSAPFSIHQFVTMG KTLCDINPGQWFGPTTSCSCVARLSDQNPDVPLHVYVARNGNAIYRDQLSKVSFPVLLLI PTRLGIDSINESYYDQLLQVFEIRSFVGITGGRPRSAHYFYARQNQYFFYLDPHCTHFAH TTTQPASEETFHSATLRRVAIQDLDPCMIFGFLIRDEEEWHSFEANQKYFADIVQIFDSE PQPVETHDDFVLDENVEDHL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
SPAC19B12.0858 SITYRSGIEG0.992unspSPAC19B12.08192 SSINESYYDQ0.995unsp

SPAC19B12.08      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India