SPAC1F7.06 | ThiJ domain protein

_IDPredictionOTHERSPmTPCS_Position
SPAC1F7.06OTHER0.9998500.0001110.000039
No Results

  • Fasta :-

    >SPAC1F7.06 MDERHEAAGETSEKPKVLFLLNSYYGPFYDDGDNTGVNVVDLYEAFKVFEENGFDIVIAS DTGDYGFDDKSFRDPAIVDETQSIFSNPDCSLMKKLKNIARLDRLNPSDYVIVYIPGGYG CSFDFPHAKVVQDFLYRFYETKGIICAVAQANIALAYTTNSDGQALCTNRRVTGCTWKDE VQNGVLNVMNRLNFYSFGHIAENIGAIFESPPVYVEDPFIVEDGQLFTGSNTNSAKGVAM EAVRAVLNYDG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/351 Sequence name : 351 Sequence length : 251 VALUES OF COMPUTED PARAMETERS Coef20 : 3.205 CoefTot : 0.000 ChDiff : -17 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.088 1.347 0.188 0.534 MesoH : -0.590 0.212 -0.311 0.202 MuHd_075 : 8.233 11.280 3.724 2.533 MuHd_095 : 20.335 4.610 5.528 0.148 MuHd_100 : 28.374 10.792 7.079 1.636 MuHd_105 : 32.251 14.813 7.609 3.094 Hmax_075 : -7.200 3.800 -3.125 1.780 Hmax_095 : -9.450 -2.900 -4.568 0.018 Hmax_100 : -1.900 2.500 -1.990 0.550 Hmax_105 : -5.800 2.600 -4.081 0.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9960 0.0040 DFMC : 0.9890 0.0110
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 251 SPAC1F7.06 MDERHEAAGETSEKPKVLFLLNSYYGPFYDDGDNTGVNVVDLYEAFKVFEENGFDIVIASDTGDYGFDDKSFRDPAIVDE 80 TQSIFSNPDCSLMKKLKNIARLDRLNPSDYVIVYIPGGYGCSFDFPHAKVVQDFLYRFYETKGIICAVAQANIALAYTTN 160 SDGQALCTNRRVTGCTWKDEVQNGVLNVMNRLNFYSFGHIAENIGAIFESPPVYVEDPFIVEDGQLFTGSNTNSAKGVAM 240 EAVRAVLNYDG 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC1F7.06 4 ---MDER|HE 0.100 . SPAC1F7.06 14 AGETSEK|PK 0.057 . SPAC1F7.06 16 ETSEKPK|VL 0.070 . SPAC1F7.06 47 DLYEAFK|VF 0.064 . SPAC1F7.06 70 DYGFDDK|SF 0.065 . SPAC1F7.06 73 FDDKSFR|DP 0.103 . SPAC1F7.06 94 PDCSLMK|KL 0.060 . SPAC1F7.06 95 DCSLMKK|LK 0.093 . SPAC1F7.06 97 SLMKKLK|NI 0.067 . SPAC1F7.06 101 KLKNIAR|LD 0.082 . SPAC1F7.06 104 NIARLDR|LN 0.138 . SPAC1F7.06 129 FDFPHAK|VV 0.086 . SPAC1F7.06 137 VQDFLYR|FY 0.097 . SPAC1F7.06 142 YRFYETK|GI 0.084 . SPAC1F7.06 170 QALCTNR|RV 0.089 . SPAC1F7.06 171 ALCTNRR|VT 0.125 . SPAC1F7.06 178 VTGCTWK|DE 0.067 . SPAC1F7.06 191 VLNVMNR|LN 0.102 . SPAC1F7.06 236 SNTNSAK|GV 0.091 . SPAC1F7.06 244 VAMEAVR|AV 0.093 . ____________________________^_________________

  • Fasta :-

    >SPAC1F7.06 CGTACACATAAATTGCTTCGAGAGGATCGTTGAAAGGCTCAAAATAACTCGCATTTGAAG ATAATAAGTTTTGAGACTCGTGTAATCATCTTGAGGGACATTTCCTGACAGTTTGATCAC ATAACTTTTCATCAGATAAATATCCCCTTTTCTTAATTTTTAAAATATAACGAGGATATT TTAACTGATAACCCAAATTTGCGACATTGAATTGTATTGAAAATTGAATTAAAAAATGGA TGAACGACATGAAGCAGCAGGAGAGACGTCGGAAAAACCAAAAGTACTTTTCTTGCTGAA TAGCTATTATGGCCCTTTTTATGATGATGGAGATAACACTGGCGTGAATGTAGTAGACTT ATATGAAGCGTTTAAAGTATTTGAAGAAAATGGTTTTGACATAGTAATTGCGTCTGATAC TGGGGATTATGGATTTGACGATAAATCCTTTCGAGACCCGGCGATAGTGGATGAAACACA ATCAATATTTTCTAATCCTGATTGCTCTTTGATGAAGAAATTAAAGAATATCGCAAGACT GGATCGATTGAATCCTTCGGACTATGTGATTGTTTATATACCTGGAGGATATGGCTGTTC TTTTGATTTCCCCCATGCCAAAGTTGTACAGGACTTTTTGTATCGGTTTTATGAAACAAA AGGAATTATATGCGCCGTTGCACAAGCTAACATTGCCTTGGCTTACACGACGAATTCTGA TGGGCAAGCTTTGTGTACGAACCGCCGTGTGACCGGTTGCACTTGGAAGGATGAAGTCCA AAATGGTGTCTTGAATGTGATGAACCGTCTTAATTTCTATAGTTTTGGTCACATTGCCGA AAACATTGGCGCCATTTTTGAATCTCCTCCTGTATACGTTGAGGACCCTTTCATTGTGGA GGATGGGCAGCTGTTTACTGGATCGAATACAAATAGTGCCAAAGGTGTAGCAATGGAAGC GGTGAGGGCTGTGTTAAATTATGATGGATGATCAAAATTTCTTTTTTGGAAAACCGATCG TGTTTTGGGATTCTCACATTTTTTTTATTTTTTCTAATGTTTGAAATGGCACCATTGGTT AATCGATAACTGTAATTATTAATTTCACGCTTATTATAAAAATTATTTTGGCATTAATTT TGTTGCACTTTTTTTTTTGTACAATCTAGAGACTTTTCGGTTTGATACCGAGTACATATG TTTGTATTTAAAGTTATATATATTCTCATGCTTTGTATATGCACAAATATACTGAAATTT GAGATATTGGGGATGTTCGTTGGAAATTATCTCTGTACGAATGGGACAAGGCGGATTTGA TTTTGGAAATGAGTATAATAATCTATTAAATTTCTCTATGCAGTTTTGGGATAACTTTCG TTTTTGCATTTTACCCTGTATTTCGGGATCATCAACTACTATATCCAACTGCGAAACATA ATCTATGATTTCTTATTTCAAAGAAGATAGAAAAGTCCAACTTTGAGTTTTCTTATTGTT AGGGTGTTTTCCATGCGGGAAATCGCAATCCATTCTATTTTTTTTTTACCTATTTATACC AAGTATAATGCCGAGTTACTAATGAATTCTTTTTTTTCATTTTCGGTTCCTTTTATTTGA GGATTGGTGTTGAATAAGAATTATTTCTACCGCCTCTGTGAAAGAGAATAAAACGCTACC AAGGAATCATATGCAAATACCTCGTTTGCTATTTCAATATCCTAACATTTTCGACAGACA TTGATGTGCCCTGCATTTTAATGGACTGACAGGGACATTGGTGTGAAAATATGAATTTAT TTATTTATGAAAAGTTCAATTTCATTGTTAATACCGGTGTATATGCCTTTGCTTCATCAG ATTAGCAGACGATTGTCTAATGGCATTTAAATTTTATTTAAACGAAGCTAATCATATAAA TCATCTGATTAAATAGAATGAAC
  • Download Fasta

  • Fasta :-

    MDERHEAAGETSEKPKVLFLLNSYYGPFYDDGDNTGVNVVDLYEAFKVFEENGFDIVIAS DTGDYGFDDKSFRDPAIVDETQSIFSNPDCSLMKKLKNIARLDRLNPSDYVIVYIPGGYG CSFDFPHAKVVQDFLYRFYETKGIICAVAQANIALAYTTNSDGQALCTNRRVTGCTWKDE VQNGVLNVMNRLNFYSFGHIAENIGAIFESPPVYVEDPFIVEDGQLFTGSNTNSAKGVAM EAVRAVLNYDG

  • title: conserved cys residue
  • coordinates: A149
No Results
No Results
IDSitePeptideScoreMethod
SPAC1F7.0671 SFDDKSFRDP0.995unsp

SPAC1F7.06      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India