SPAC222.08c | glutamine aminotransferase subunit Sno1 (predicted)

_IDPredictionOTHERSPmTPCS_Position
SPAC222.08cOTHER0.9994530.0002320.000316
No Results

  • Fasta :-

    >SPAC222.08c MSSASMFGSLKTNAVDESQLKARIGVLALQGAFIEHINIMNSIDGVISFPVKTAKDCENI DGLIIPGGESTTIGKLINIDEKLRDRLEHLVDQGLPIWGTCAGMILLSKKSRGGKFPDPY LLRAMDIEVTRNYFGPQTMSFTTDITVTESMQFEATEPLHSFSATFIRAPVASTILSDDI NVLATIVHEGNKEIVAVEQGPFLGTSFHPELTADNRWHEWWVKERVLPLKEKKD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/629 Sequence name : 629 Sequence length : 234 VALUES OF COMPUTED PARAMETERS Coef20 : 4.104 CoefTot : 0.355 ChDiff : -8 ZoneTo : 15 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.988 1.400 0.100 0.598 MesoH : -0.310 0.341 -0.362 0.238 MuHd_075 : 18.382 15.587 6.004 3.197 MuHd_095 : 11.437 11.632 3.452 2.705 MuHd_100 : 11.109 11.170 3.301 2.914 MuHd_105 : 10.988 8.787 2.951 2.532 Hmax_075 : 16.800 14.933 2.058 4.573 Hmax_095 : 5.688 7.875 -0.927 2.450 Hmax_100 : 4.500 5.600 -1.221 2.460 Hmax_105 : 10.000 6.883 0.577 3.057 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8421 0.1579 DFMC : 0.8418 0.1582
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 234 SPAC222.08c MSSASMFGSLKTNAVDESQLKARIGVLALQGAFIEHINIMNSIDGVISFPVKTAKDCENIDGLIIPGGESTTIGKLINID 80 EKLRDRLEHLVDQGLPIWGTCAGMILLSKKSRGGKFPDPYLLRAMDIEVTRNYFGPQTMSFTTDITVTESMQFEATEPLH 160 SFSATFIRAPVASTILSDDINVLATIVHEGNKEIVAVEQGPFLGTSFHPELTADNRWHEWWVKERVLPLKEKKD 240 ................................................................................ 80 ................................................................................ 160 .......................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ SPAC222.08c 11 SMFGSLK|TN 0.064 . SPAC222.08c 21 VDESQLK|AR 0.061 . SPAC222.08c 23 ESQLKAR|IG 0.100 . SPAC222.08c 52 VISFPVK|TA 0.079 . SPAC222.08c 55 FPVKTAK|DC 0.092 . SPAC222.08c 75 ESTTIGK|LI 0.061 . SPAC222.08c 82 LINIDEK|LR 0.064 . SPAC222.08c 84 NIDEKLR|DR 0.079 . SPAC222.08c 86 DEKLRDR|LE 0.069 . SPAC222.08c 109 GMILLSK|KS 0.056 . SPAC222.08c 110 MILLSKK|SR 0.203 . SPAC222.08c 112 LLSKKSR|GG 0.105 . SPAC222.08c 115 KKSRGGK|FP 0.230 . SPAC222.08c 123 PDPYLLR|AM 0.079 . SPAC222.08c 131 MDIEVTR|NY 0.097 . SPAC222.08c 168 FSATFIR|AP 0.096 . SPAC222.08c 192 IVHEGNK|EI 0.071 . SPAC222.08c 216 ELTADNR|WH 0.082 . SPAC222.08c 223 WHEWWVK|ER 0.054 . SPAC222.08c 225 EWWVKER|VL 0.085 . SPAC222.08c 230 ERVLPLK|EK 0.067 . SPAC222.08c 232 VLPLKEK|KD 0.062 . SPAC222.08c 233 LPLKEKK|D- 0.133 . ____________________________^_________________

  • Fasta :-

    >SPAC222.08c ATTTGCGATATGATTCAAGGTTGCTCCACCAATTCTATCTTTATTGCCATCTTTGATTCT GGCGATAATTTTTCGCTTCCACATTGCCAGACTTATATAATGACCCCCGGTATGTCTGAT TGGGTTATTATCCTATAGCCACCACCGCCTTAATGAACTGAGACACATTGTATACTACTT AAAGTGGATCTCTTAGTTACGTTTGATTTAATTTTTTTAAGGTATAAACATAGACAACAC AATCCTTTAATACCCATCTTCAACGGTTTGAGTGATTCATTGCTGATTAGTAAGGGGTGT ATCAATCTTCATCAGCATCTACTTGTTCAATAGGTTTCAGGATATCTTTCGTTTGTTTTT CTTAGTTCTTTCAAACTTTCTTTGTTTTTTTATTCGTTTCTAGTCGATTAAAAACTTTAA AAAAATGTCTTCTGCATCCATGTTCGGGAGTCTTAAAACCAATGCTGTGGACGAATCCCA GTTGAAGGCTAGAATTGGAGTTTTAGCTCTCCAAGGAGCATTTATTGAACACATTAATAT AATGAATTCCATTGATGGAGTAATTTCTTTTCCTGTTAAAACTGCTAAGGATTGCGAAAA TATTGATGGCTTAATTATCCCAGGAGGTGAGTCTACTACCATTGGCAAATTAATCAACAT TGATGAGAAGCTTCGTGATCGTTTGGAGCACTTGGTTGATCAAGGACTTCCTATTTGGGG AACGTGTGCTGGTATGATTCTTCTGTCGAAAAAGTCTCGAGGTGGAAAGTTCCCAGATCC TTATTTGTTGCGCGCCATGGATATTGAAGTGACTCGTAATTATTTTGGACCTCAAACTAT GTCTTTTACAACTGATATTACAGTTACAGAGTCAATGCAATTTGAAGCCACTGAACCTTT ACATTCCTTTTCGGCCACTTTTATTCGTGCTCCAGTCGCTTCGACAATCCTGTCTGATGA TATTAATGTTTTAGCTACTATTGTTCATGAAGGCAACAAAGAGATTGTTGCGGTTGAGCA AGGTCCCTTTTTAGGTACATCGTTTCACCCCGAGCTGACCGCCGATAATAGATGGCATGA ATGGTGGGTAAAAGAGCGTGTTTTACCTTTAAAGGAGAAAAAGGATTAGTTTTTTAAATT CATGCCTATAGTTGCATGTTGTATAATCCCACAAAAAGAGTTGAGACAGGTAAATGCCTC ACTTATTATTTTAGTCAGTCATTAAGTTTTAAATAATAAATCCTTTTAGATTAATTTTTT AGATTTTAAGTGTTAATTGTTATTTGCTTTCAATCTTTTCTAGGTTCATTTGCGCTGCAT AAGTTGCTGTCATTTCCATTGCTAAAAGCATATAGTTTGAATACATTATCAGTTAATCAA ATGTTTATAAAAAATGCGCATTATTTTG
  • Download Fasta

  • Fasta :-

    MSSASMFGSLKTNAVDESQLKARIGVLALQGAFIEHINIMNSIDGVISFPVKTAKDCENI DGLIIPGGESTTIGKLINIDEKLRDRLEHLVDQGLPIWGTCAGMILLSKKSRGGKFPDPY LLRAMDIEVTRNYFGPQTMSFTTDITVTESMQFEATEPLHSFSATFIRAPVASTILSDDI NVLATIVHEGNKEIVAVEQGPFLGTSFHPELTADNRWHEWWVKERVLPLKEKKD

  • title: catalytic triad
  • coordinates: C101,H208,E210
IDSitePositionGscoreIscore
SPAC222.08cT1560.5070.224
IDSitePositionGscoreIscore
SPAC222.08cT1560.5070.224
No Results

SPAC222.08c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India